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Author	SHA1	Message	Date
John Chilton	a3954347ff	Fix for allowing optional strings.	2025-07-29 11:22:36 -04:00
John Chilton	8fe45184fb	Fix test hopefully.	2025-07-29 10:02:51 -04:00
John Chilton	8d3cba77a4	Sample sheets - add a top level input for wf editor.	2025-07-28 13:43:14 -04:00
John Chilton	12a75987d1	Sample sheets - shortened source descriptions, "better" on small screens.	2025-07-28 13:43:14 -04:00
John Chilton	dee0f1a27e	Rework sample sheets to use monitor fetch composable.	2025-07-28 13:43:14 -04:00
John Chilton	5447f98289	Rework sample sheets to use POSTs instead of GETs. ... Marius outlines why in the review of the PR.	2025-07-28 13:43:14 -04:00
John Chilton	a4ce44c3bc	Fix sample sheet collection description in history panel.	2025-07-25 11:47:03 -04:00
John Chilton	b6807bc6d5	sample_sheet: fix hda src ids. ... Had this right for nested collections but not HDAs.	2025-07-25 11:47:03 -04:00
John Chilton	95269c84a6	Sample sheets - use column header tooltips for descriptions.	2025-07-25 11:47:03 -04:00
John Chilton	225cbeaaa6	Improve default state for form column definitions.	2025-07-25 11:47:03 -04:00
John Chilton	e2fe9bfa76	Rebuild schema for sample sheets.	2025-07-25 11:47:03 -04:00
John Chilton	0b3d4def4a	Fix downloading column definitions taking out of workflow editor.	2025-07-25 11:47:03 -04:00
John Chilton	d26605517e	Implement sample sheets.	2025-07-25 11:46:59 -04:00
John Chilton	e2e168009e	Rebuild schema for fetch workbook parsing changes.	2025-07-25 11:46:24 -04:00
John Chilton	7c09824364	Log format parsing info & column inferences when parsing workbooks.	2025-07-25 11:46:24 -04:00
John Chilton	8947cf8051	Generalize fetch workbook parsing on backend. ... Can now read a bunch of CSV/TSV files as easily as excel files.	2025-07-25 11:46:24 -04:00
John Chilton	3f979ae05d	DB migration for sample sheets.	2025-07-25 11:46:24 -04:00
John Chilton	316d9817a8	Validate workflow inputs more directly on the backend.	2025-07-25 11:46:24 -04:00
John Chilton	092954d95a	Implement fetch monitor composable.	2025-07-25 11:46:24 -04:00
John Chilton	b0afee32d8	Some initial scaffolding for the fetch API.	2025-07-25 11:46:12 -04:00
John Chilton	3e88628f5d	Extend job state logic to include more states.	2025-07-25 11:45:01 -04:00
John Chilton	174926424e	Use new location for job state logic.	2025-07-25 11:45:01 -04:00
John Chilton	5ab94b67ed	Some initial scaffolding for the fetch API.	2025-07-25 11:45:01 -04:00
Nicola Soranzo	41c4186903	Merge pull request #20696 from ccoulombe/patch-2 ... Fix assertion on python version	2025-07-25 11:28:08 +01:00
Charles Coulombe	b08b68a889	Fix assertion on python version ... Likely a typo, f-strings were introduced in 3.6	2025-07-24 21:15:28 -04:00
John Chilton	63f0d25a40	Merge pull request #20690 from davelopez/fix_resource_watcher ... Fix resource watcher composable race condition	2025-07-23 15:13:51 -04:00
davelopez	cd7f6b728e	Add tests for isWatchingResource flag updates in useResourceWatcher	2025-07-23 12:52:48 +02:00
davelopez	6eac857949	Fix race condition in useResourceWatcher ... - Add isWatchingResource flag to fix the issue and expose it for convenience - Improve documentation	2025-07-23 12:52:32 +02:00
davelopez	87ce3cdc20	Add unit tests for useResourceWatcher functionality	2025-07-23 12:19:37 +02:00
Alireza Heidari	039e8457ac	Merge pull request #20666 from davelopez/history_export_wizard ... Unify History export UX using wizard	2025-07-22 16:26:50 +02:00
Nicola Soranzo	50ad81c61a	Merge pull request #20680 from galaxybot/dev_auto_update_dependencies ... Update Python dependencies	2025-07-21 19:19:45 +01:00
Marius van den Beek	72201578b4	Merge pull request #20674 from jmchilton/collection_dialog_sort ... Sort collection dialog by HID descending.	2025-07-21 16:35:14 +02:00
Nicola Soranzo	4956f20874	Type annotation fixes for mypy 1.17.0	2025-07-21 08:02:35 +01:00
galaxybot	a2858669b9	Update Python dependencies ... by running `make update-dependencies`.	2025-07-19 03:32:51 +00:00
Nuwan Goonasekera	b5e3a5de79	Merge pull request #20547 from AustralianBioCommons/psa-access-token ... Decode OIDC access token as part of authentication pipeline	2025-07-18 10:21:42 +07:00
John Chilton	d282c21ce0	Sort collection dialog by HID descending.	2025-07-17 14:48:26 -04:00
John Chilton	4f969e109d	Merge pull request #20609 from jmchilton/deferred_local_bug ... UI Bug - don't allow checking deferred for local files.	2025-07-17 10:42:01 -04:00
davelopez	c2524b3f0c	Adapt test_history_export_tracking integration test	2025-07-17 14:30:34 +02:00
davelopez	a1e0453856	Add unit tests for HistoryExportWizard component	2025-07-17 10:23:04 +02:00
Nicola Soranzo	6240561fc2	Merge branch 'release_25.0' into dev	2025-07-17 00:19:56 +01:00
davelopez	86df274a26	Adapt HistoryExport unit tests	2025-07-16 18:06:31 +02:00
Martin Cech	893360d0a8	Merge pull request #20576 from pavanvidem/patch-5 ... update core.history tour	2025-07-16 14:21:09 +02:00
marius-mather	d4e02eba66	Lint fixes	2025-07-16 11:15:50 +10:00
marius-mather	4796a86860	Merge branch 'psa-access-token' of github.com:AustralianBioCommons/galaxy into psa-access-token	2025-07-16 10:49:36 +10:00
marius-mather	6231c42292	Remove oidc_decode_access_token option, just include it in the auth pipeline by default	2025-07-16 10:42:19 +10:00
marius-mather	af98bafdf5	Remove commented code	2025-07-16 10:22:06 +10:00
marius-mather	dd1d9b6609	Use a single patch_oidc_config function that we override for each implementation	2025-07-16 10:02:04 +10:00
marius-matherandNuwan Goonasekera	1949bc4b6d	Change timeout for checking if Docker is ready ... Co-authored-by: Nuwan Goonasekera <2070605+nuwang@users.noreply.github.com>	2025-07-16 09:41:16 +10:00
Nicola Soranzo	88bc25af28	Merge pull request #20634 from Smeds/pairtool-updated-format-and-sniffers ... [25.0] Pairtool updated format and sniffers	2025-07-15 21:29:58 +01:00
Marius van den Beek	767ce2e60d	Merge pull request #20664 from guerler/remove_entries_from_filter ... Removes `entries` from purged filter label in history grid	2025-07-15 19:54:01 +02:00