Commit Graph
389 Commits
Author SHA1 Message Date
Martin Cech 7f2922f9e2 update to transparent logo 2015-05-13 14:43:21 -04:00
John Chilton b1e6700087 Fill out doc stubs for releases through 13.01.
These pages have the header and footer and links to the relevant pages on the wiki.

These are the ones on github and the ones that got at least a couple of the most serious bug fixes announced over the last year.
2015-05-13 14:39:24 -04:00
John Chilton 7bd8a20cb0 Refactor thanks from annoucements out. 2015-05-13 13:43:21 -04:00
Martin Cech ee0b405268 add some ads 2015-05-13 13:38:49 -04:00
John Chilton a893835783 Merge pull request #4 from martenson/patch-2
update logo
2015-05-13 12:28:59 -05:00
Martin Cech b64da97e1b shrink to 25%; switch to projectless version 2015-05-13 13:11:42 -04:00
Martin Cech bb3126faa3 link to wiki SourceCode instead of getgalaxy.org 2015-05-13 12:50:45 -04:00
Martin Cech 7708639458 update logo 2015-05-13 12:45:40 -04:00
John Chilton c7650dd209 WIP: Announcement updates. 2015-05-13 11:51:48 -04:00
John Chilton 5a2eed349b WIP: Experiment porting release announcement to rST/RTD. 2015-05-13 11:11:03 -04:00
Daniel Blankenberg 92362dcc07 all data source tools go to _top 2015-05-12 16:39:23 -04:00
John Chilton 4e1324e432 Add PR7 to release notes (caught by @bgruening).
... small updates to bootstrap history script for reuse in planemo.
2015-05-12 12:15:56 -04:00
Martin Cech 6766e47244 add some trello card links 2015-05-12 11:16:31 -04:00
John Chilton 671ea37b20 More updates to release 15.05 notes based on @nsoranzo's comments. 2015-05-12 11:05:09 -04:00
John Chilton 6ac018ef22 Suggestions for release notes 15.05 from @nsoranzo. 2015-05-12 10:29:51 -04:00
John Chilton 3e5b5e93d8 Add more links to 15.05 release notes - Trello and otherwise. 2015-05-12 09:29:42 -04:00
John Chilton bb7fb089fe First crack at release notes for 15.05. 2015-05-11 23:05:56 -04:00
Dannon Baker 3af3bf5742 Per IRC discussion, remove demo_sequencer webapp. 2015-02-21 13:29:58 -05:00
Martin Cech 5a9259d773 updated sphinx documentation: added managers; added new API controllers; cleanup 2014-10-22 17:55:45 -04:00
Nate Coraor 8fadc6392b Rename universe_wsgi.ini -> galaxy.ini everywhere. 2014-09-15 16:43:51 -04:00
Trevor Wennblom 195017daf7 remove misc files that slipped past hgignore 2014-04-10 22:54:34 -05:00
Nate Coraor 9c64fc123e Remove broken and/or obsolete tools. 2014-01-27 13:58:31 -05:00
Martin Cech 87c84e8c5e Merged in martenson/galaxy-central-marten (pull request #273)
Initial Data Libraries
2013-12-19 12:48:22 -05:00
Martin Cech 3317e25ee1 refactor + docs 2013-12-19 12:44:34 -05:00
John Chilton 1653efcf6e RFC: API design guidelines and considerations. 2013-12-16 15:57:31 -06:00
Dannon Baker 51b6811867 Placeholder in api documentation for Return Codes and Format standards. 2013-12-16 15:17:51 -05:00
Dave Clements 2935ca8e42 New RST files describing Sphinx doc for tool shed changes. 2013-04-01 14:49:17 -07:00
Dannon Baker fd5358bb5a Sphinx Doc: Remove enable_api step from the api quickstart as it is no longer necessary. 2013-01-18 10:26:57 -05:00
Dave Clements c85177860d Update Sphinx RST structural doc to reflect recent code changes. 2013-01-14 17:01:17 -08:00
Dave Clements a3dac95afc First iteration of updating Sphinx RST files. These describe classes and modules (and ...) and are used to generate the Sphinx code documentation. However, they are not updated automatically.
Add the patch.py to automate some of the RST update process, but it is still pretty brutal.  Look for cleanup in the next few releases.
2012-12-18 13:27:20 -08:00
Dave Clements 1d3761c779 Added boilerplate for Sphinx doc home page. 2012-11-06 11:14:22 -08:00
Dave Clements b808d4b935 Added numpy to mock modules list. Readthedocs of galaxy-central is broken, and it's complaining about numpy. So, try adding it to mock modules list and see if that helps. 2012-11-06 09:31:28 -08:00
Dave Clements 5338d778b4 Pared Sphinx's mock module list down to those that actually get rid of errors at ReadTheDocs. 2012-11-03 10:25:21 -07:00
Dave Clements 2031da8f68 Took out mock modules that weren't helping from Sphinx config file. 2012-11-03 10:10:15 -07:00
Dave Clements 7ca742c187 More changes to get Sphinx to run with fewer erros on ReadTheDocs.org. 2012-11-03 10:00:12 -07:00
Dave Clements fed96397ef Added ReadTheDocs section to Sphinx's conf.py. This lists modules that need to be mocked up, Ithink. 2012-11-03 09:34:06 -07:00
Dave Clements 9ece96cc8f All Sphinx related changes:
- Changed from Galaxy Documentation to Galaxy Code Documentation to be clearer
- Dropped galaxy.jobs.rules, as it is now empty.
2012-11-03 08:51:09 -07:00
Dave Clements f39c2cb970 Bringing Sphinx RST files up to date; changing generated doc so all modules are documented, not just galaxy.* 2012-10-31 15:41:13 -07:00
Dannon Baker 1a3a17056e Initial commit of Galaxy Documentation. 2012-06-13 11:31:00 -04:00