All Sphinx related changes:

- Changed from Galaxy Documentation to Galaxy Code Documentation to be clearer
- Dropped galaxy.jobs.rules, as it is now empty.

doc/source/conf.py

@@ -52,7 +52,7 @@ source_suffix = '.rst'
 master_doc = 'index'
 
 # General information about the project.
-project = u'Galaxy'
+project = u'Galaxy Code'
 copyright = u'2012, Galaxy Team'
 
 # The version info for the project you're documenting, acts as replacement for
@@ -195,7 +195,7 @@ latex_elements = {
 # Grouping the document tree into LaTeX files. List of tuples
 # (source start file, target name, title, author, documentclass [howto/manual]).
 latex_documents = [
-  ('index', 'Galaxy.tex', u'Galaxy Documentation',
+  ('index', 'Galaxy.tex', u'Galaxy Code Documentation',
    u'Galaxy Team', 'manual'),
 ]
 
@@ -225,7 +225,7 @@ latex_documents = [
 # One entry per manual page. List of tuples
 # (source start file, name, description, authors, manual section).
 man_pages = [
-    ('index', 'galaxy', u'Galaxy Documentation',
+    ('index', 'galaxy', u'Galaxy Code Documentation',
      [u'Galaxy Team'], 1)
 ]
 
@@ -239,7 +239,7 @@ man_pages = [
 # (source start file, target name, title, author,
 #  dir menu entry, description, category)
 texinfo_documents = [
-  ('index', 'Galaxy', u'Galaxy Documentation',
+  ('index', 'Galaxy', u'Galaxy Code Documentation',
    u'Galaxy Team', 'Galaxy', 'Data intensive biology for everyone.',
    'Miscellaneous'),
 ]

doc/source/index.rst

@@ -1,5 +1,5 @@
-Galaxy Documentation
-********************
+Galaxy Code Documentation
+*************************
 
 Galaxy is an open, web-based platform for accessible, reproducible, and
 transparent computational biomedical research.

doc/source/lib/galaxy.jobs.rst

@@ -48,7 +48,6 @@ Subpackages
 
     galaxy.jobs.actions
     galaxy.jobs.deferred
-    galaxy.jobs.rules
     galaxy.jobs.runners
     galaxy.jobs.splitters