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Author SHA1 Message Date
Nicola Soranzo 7cf3ce97ec Unpin alembic in galaxy-data package 2022-03-31 18:50:07 +01:00
Nicola Soranzo d11bbf219d Update mypy to 0.942 . Fix new mypy errors. 
Remove unused `optional()` decorator function that had an annotation issue.
 2022-03-31 18:47:52 +01:00
David López f58a2b1b5e Merge pull request #13626 from guerler/align_ui 
Add advanced filtering panel to history, align appearance of panels
 2022-03-31 13:47:42 +02:00
Marius van den Beek 2b448286fe Merge pull request #13644 from jmchilton/pin_pysam 
Fix package CI for pysam errors.
 2022-03-31 10:50:09 +02:00
John Chilton 57cb787e91 Merge pull request #13643 from mvdbeek/fix_depends_type_annotation 
Forward type annotation of depends
 2022-03-30 17:03:55 -04:00
John Chilton f9940e35d1 Pin pysam since 0.19.0 seems to have incomplete type definitions. 2022-03-30 16:44:58 -04:00
guerler 995ac4e6ba Use exists instead of length to check availability of elements in jest 2022-03-30 15:24:08 -04:00
Aysam GuerlerandDavid López b2cf20fcbe Update client/src/components/History/CurrentHistory/HistoryFilters.test.js 
Co-authored-by: David López <46503462+davelopez@users.noreply.github.com>
 2022-03-30 15:24:08 -04:00
guerler edf8d36948 Add test case for filter panel 2022-03-30 15:24:08 -04:00
guerler 5253ae2a0d Add reset query escape handler to history filter 2022-03-30 15:24:08 -04:00
guerler ecda70f74d Align appearance of visualization search field to tool and history search fields 2022-03-30 15:24:08 -04:00
guerler bdad18f1c2 Use delayed input component for tool search due to reliability issues with customized debounce input 2022-03-30 15:24:08 -04:00
guerler 9b9a7c9078 Selenium test adjustments and fixes 2022-03-30 15:24:08 -04:00
guerler 2b07b6ac5c Add additional filtering tests for deleted and visible queries 2022-03-30 15:24:08 -04:00
guerler 2a70806843 Inject deleted and visible query flags into regular filters 2022-03-30 15:24:08 -04:00
guerler 4c6cab2272 Remove sync from legacy history 2022-03-30 15:24:08 -04:00
guerler 7d83af9a45 Always listen to the current history 2022-03-30 15:24:08 -04:00
guerler 45c57504f1 Avoid quotation marks if value does not contain spaces 2022-03-30 15:24:08 -04:00
guerler da4b0e492c Add deleted and visibility switches to advanced filtering panel 2022-03-30 15:24:08 -04:00
guerler 5d7e7de5a7 Consolidate deleted and visible flag with regular filtering options 2022-03-30 15:24:08 -04:00
guerler 8ba84ef968 Add deleted and visible as regular filter options 2022-03-30 15:24:08 -04:00
guerler 0f38fff45e Consolidate deleted and hidden attribute handling into filter text 2022-03-30 15:24:08 -04:00
guerler 26e519948e Limit quotation use to (') for now for matching reliability 2022-03-30 15:24:08 -04:00
guerler 9c47c558d5 Reorder advanced filter options 2022-03-30 15:24:08 -04:00
guerler 05465d08b6 Link advanced filter options to filter text 2022-03-30 15:24:08 -04:00
guerler bf8c3da347 Remove layout component 2022-03-30 15:24:08 -04:00
guerler 31cc800adb Add advanced search panel 2022-03-30 15:24:08 -04:00
guerler fe2ab81406 Move search to top of history panel, align appearance 2022-03-30 15:24:06 -04:00
guerler f73d3e3f3e Align tool panel search field appearance to history 2022-03-30 15:19:08 -04:00
guerler b6413d8a33 Always show tags for datasets, do not hide on expansion 2022-03-30 15:19:08 -04:00
John Chilton 7108638748 Merge pull request #13631 from dannon/history-dropdown-language 
Minor tweak to language in history dropdown in beta history
 2022-03-30 13:53:17 -04:00
mvdbeek 8a656d1c2c Forward type annotation of depends 2022-03-30 19:37:29 +02:00
Marius van den Beek df7831bb6d Merge pull request #13633 from jmchilton/selenium_flakey_test 
Potentially fix flakey rename test with beta history.
 2022-03-30 17:07:15 +02:00
Dannon c6d7fe752f Merge pull request #13635 from itisAliRH/limit-job-parameter-value-with-and-make-it-scrollable 
Limit tool parameter value to show only 20 lines with overflow scrolling
 2022-03-30 10:55:33 -04:00
Alireza Heidari 38cb86c7c3 Limit tool parameter value to show only 20 lines and overflow scrolling 2022-03-29 19:19:09 +04:30
Marius van den Beek f79fb30ec5 Merge pull request #13618 from ic4f/dev_alembic_fix2 
Fix bug to enable alembic's stamp command: revision can be a list of revisions
 2022-03-29 16:15:17 +02:00
Dannon Baker 75016526ef Minor tweaks to language in history dropdown in beta history 2022-03-29 09:33:16 -04:00
Dannon c2c62f6c00 Merge pull request #13629 from itisAliRH/update-beta-history-when-history-id-change-in-legacy-grid 
update beta history from legacy `grid-view.js`
 2022-03-29 09:19:31 -04:00
John Chilton ac7901d26a Potentially fix flakey rename test with beta history. 2022-03-29 09:07:19 -04:00
Dannon c661153a3d Merge pull request #13623 from guerler/history_text_filter_tests 
Improve matching reliability, add test cases
 2022-03-28 19:19:43 -04:00
Nicola Soranzo a4053dc199 Merge branch 'release_22.01' into dev 2022-03-28 23:16:34 +01:00
Alireza Heidari 4da1217355 update beta history from legacy grid-view.js 2022-03-29 02:03:17 +04:30
Nicola Soranzo 5b85b6595b Merge pull request #13557 from mvdbeek/fix_job_message_override 2022-03-28 22:28:26 +01:00
Dannon 380d6e8773 Merge pull request #13614 from galaxyproject/dependabot/npm_and_yarn/client/minimist-1.2.6 
Bump minimist from 1.2.5 to 1.2.6 in /client
 2022-03-28 15:22:12 -04:00
Nicola Soranzo b25334ccae Merge branch 'release_22.01' into dev 2022-03-28 19:05:48 +01:00
Aysam GuerlerandDavid López 92b1f6c1e8 Update client/src/store/historyStore/historyItemsFiltering.test.js 
Co-authored-by: David López <46503462+davelopez@users.noreply.github.com>
 2022-03-28 13:03:57 -04:00
Aysam GuerlerandDavid López 64bd4ead4f Update client/src/store/historyStore/historyItemsFiltering.test.js 
Co-authored-by: David López <46503462+davelopez@users.noreply.github.com>
 2022-03-28 13:03:50 -04:00
Aysam GuerlerandDavid López baf60e72c2 Update client/src/store/historyStore/historyItemsFiltering.test.js 
Co-authored-by: David López <46503462+davelopez@users.noreply.github.com>
 2022-03-28 13:03:41 -04:00
mvdbeek 0ebe2af5ea Drop redundant statement 2022-03-28 18:58:37 +02:00
Sergey Golitsynskiy 9aaaa0d9a4 Merge pull request #13624 from ic4f/dev_alembic_fix3 
Check if column exists before executing upgrade/downgrade operations in select revisions
 2022-03-28 12:34:32 -04:00