Bjoern Gruening
7c02e8ce53
Style fixes
2014-10-18 18:38:03 -04:00
Bjoern Gruening
7ebbb74fc7
Remove copying of datatsets from Galaxy to docker. From now on, docker can fetch data from galaxy on demand.
2014-10-18 18:38:03 -04:00
Bjoern Gruening
adfee3ba65
add random port assignment for different docker containers, for multiple users
2014-10-18 18:38:03 -04:00
Bjoern Gruening
73d728d1e2
update readme file
2014-10-18 18:38:03 -04:00
Bjoern Gruening
7048f38915
restructure repository layout
2014-10-18 18:38:02 -04:00
Eric Rasche
c6559b4d70
Exchanged localhost for proper hostname
...
`request` provides a `host_url` like "fqdn:port" from which we can extract the FQDN that this server
was accessed at. This is important so that we are accessing the IPyNB on the correct host.
2014-10-18 18:38:02 -04:00
Eric Rasche
93c3695b10
Located full application URL
...
This should now work properly for galaxy instances hosted on different ports, on different
proxy-prefixes, on different fqdns, etc.
2014-10-18 18:38:01 -04:00
Eric Rasche
6f7e7805a1
Found the API key
2014-10-18 18:38:01 -04:00
Eric Rasche
6950aa2906
Typo, wrong destination and all datasets overwrote one another. This fixes that issue
2014-10-18 18:38:01 -04:00
Eric Rasche
5aa1cc13df
Import all datasets by default
...
Need to provide a method to allow selecting a subset of datasets to copy, however for now they are
all copied over.
2014-10-18 18:38:01 -04:00
Eric Rasche
1a1b22874e
Found the history ID
2014-10-18 18:38:01 -04:00
Eric Rasche
23b4ddc947
Notebook signatures must be unique
...
Rather than assigning a static notebook signature, this has been replaced with a randomly,
deterministically generated notebook signature. This is currently done off of the dataset's id,
encoded through trans (so it's the unique hash, and not just the number), however this will need to
be exchanged for history_id whenever we have access to that.
2014-10-18 18:38:01 -04:00
Eric Rasche
12ae652284
Added conf file generation
2014-10-18 18:38:00 -04:00
Bjoern Gruening
1a894a6e39
Fix for delay in displaying IPython NB
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Fixes https://github.com/bgruening/galaxy-ipython/issues/1
2014-10-18 18:38:00 -04:00
Bjoern Gruening
5ecaa970eb
use the new autokill container
2014-10-18 18:38:00 -04:00
Bjoern Gruening
7b8f457586
update readme file
2014-10-18 18:38:00 -04:00
Bjoern Gruening
3f4be5ece0
add the initial IPython Integration
2014-10-18 18:37:57 -04:00
Bjoern Gruening
4d210bbb8f
Initial commit
2014-10-18 18:37:57 -04:00
Bjoern Gruening