Commit Graph
2753 Commits
Author SHA1 Message Date
Martin Cech f0fbd25526 Merge branch 'dev' into track-newlibs
Conflicts:
	static/maps/galaxy.library.js.map
	static/scripts/galaxy.library.js
2015-10-27 16:30:05 -04:00
Nate Coraor 6d7be0a218 Merge branch 'release_15.10' of https://github.com/galaxyproject/galaxy into dev 2015-10-27 15:11:14 -04:00
Aysam Guerler 112c0390d5 Merge pull request #971 from dannon/grid_batch_fixes
Grid batch operation fixes
2015-10-22 16:02:23 -04:00
Daniel Blankenberg eca98ec828 Merge pull request #856 from dannon/dynatree_upgrade
Dynatree upgrade
2015-10-22 14:31:15 -04:00
Dannon Baker c3db6af560 Fix grid batch operations. This should correctly display and request confirmation for batch operations (such as delete a set of <GalaxyObjects> which is scary without a confirmation). It also fixes it to where grid bulk operations actually work in IE. 2015-10-21 17:54:40 -04:00
Dannon Baker a5814e8f3b Merge master-> dev. Resolved one conflict on style build. 2015-10-21 15:14:04 -04:00
Martin Cech f3bfa2f56b remove the autorefresh on Reports app
because of how long each page takes on Main the request for a subpage
would timeout because new autorefresh request would be automatically
issued
2015-10-21 14:22:41 -04:00
Martin Cech 291f4d77d6 add google analytics tracking to newlibs, propagate ga_code to JS config 2015-10-20 15:40:52 -04:00
guerler b80eb8d47c Fix tool url building 2015-10-19 18:05:41 -04:00
Martin Cech 47ce939322 remove log 2015-10-16 13:14:44 -04:00
Martin Cech 15a8c594bd fix the filter on deleted libraries to not show the public deleted libs
by default
2015-10-16 13:12:53 -04:00
carlfeberhard 41069e8ba6 UI, histories: fix/reverse order for drag and drop dataset copy 2015-10-13 17:15:56 -04:00
carlfeberhard 34a11d1187 UI, histories: fix default empty message for lazy loaded panels in multi-view 2015-10-13 16:49:38 -04:00
carlfeberhard 99fab6f342 UI, histories: on first history search, use current searchFor value at callback and not value when ajax began 2015-10-13 16:16:43 -04:00
carlfeberhard b470843c89 UI, histories: fix multiview button to be logged-in users only 2015-10-13 15:41:21 -04:00
John Chilton 408c82c43d Merge pull request #874 from guerler/tool_execution_001
Use common exceptions in tools
2015-10-10 04:37:49 +01:00
Martin Cech fae21e30f5 Merge branch 'release_15.10' into dev
Conflicts:
	lib/galaxy/web/framework/middleware/remoteuser.py
2015-10-09 12:29:36 -04:00
Martin Cech 251f390f7c fix the ordering of folder controls to match library's
also fix the active area of 'include deleted' checkbox
2015-10-08 15:25:32 -04:00
Martin Cech fe8dbd8183 fix problems with multiple bindings of view events;
drop attempts at caching the libraries - need to study more for that
2015-10-08 15:25:31 -04:00
Martin Cech 775ee33d4d fix options default order to fix bug with improper page being rendered
also add missing comma for previous commit
2015-10-08 15:25:31 -04:00
Martin Cech 39f5b7adf1 show proper message when search has no results 2015-10-08 15:25:31 -04:00
Martin Cech 2d4bd2e6f5 fix the ordering and margins of lib toolbar items 2015-10-08 15:25:31 -04:00
Martin Cech 60a1b45704 make lib search case insensitive 2015-10-08 15:25:31 -04:00
guerler 45763bf85e Use common exceptions in tools 2015-10-08 12:00:34 -04:00
Dannon Baker bad9cce30f Update dynatree to what will be the final release; we probably want to just replace it at some point. 2015-10-06 10:07:12 -04:00
carlfeberhard 31c89ea29c UI, Collections: allow expansion to fetch details for DatasetDCEs (assuming they're HDAs); move rerunnable and creating_job fetch to HDAs 2015-10-06 09:49:16 -04:00
guerler 59885c3afd Fix error message handling
Use common exception handlers

Fix error message

Fix error message

More fixes
2015-10-05 19:01:48 -04:00
Martin Cech 053f51eb53 forgoten minification and map 2015-10-05 16:16:23 -04:00
carlfeberhard 7dcd2636fd Merge pull request #820 from martenson/lib-search
Initial implementation of data library search
2015-10-05 10:39:15 -04:00
carlfeberhard 4e3fe5012f Fix to a5e97e6: correctly pass in dom fragment to setUpBehaviors (fixes multiselect btn and name editing 2015-10-02 15:05:19 -04:00
Dannon Baker 5592422d01 Merge pull request #826 from guerler/fix_select_000
Fix default value for optional select fields
2015-10-01 16:08:02 -04:00
guerler df74d2651b Fix label text 2015-10-01 15:28:16 -04:00
guerler 8cc27b45d0 Fix default value for optional select fields 2015-10-01 15:23:06 -04:00
carlfeberhard a5e97e6e59 UI, histories: fix scroll position capture/restore for the current history 2015-10-01 12:25:07 -04:00
John Chilton c7c269572e Merge pull request #819 from carlfeberhard/fix.collection-expansion
UI, Collections: correct foldout expansion for collections only re-re…
2015-09-30 20:58:35 +01:00
carlfeberhard 2c45f356a9 UI, Collections: correct foldout expansion for collections only re-rendering on 'populated' or 'visible' change; correct foldout expansion in published histories by giving dataset collection elements an api endpoint and moving 'rerunnable' and 'creating_job' fetch into li-edit 2015-09-30 15:08:32 -04:00
guerler 728c545090 Hide regular tool form for upload tool 2015-09-30 12:46:16 -04:00
Martin Cech 91ef04a25b docs, refac and indentation 2015-09-29 17:00:36 -04:00
Martin Cech f64a23fbe1 initial implementation of library search 2015-09-29 16:30:50 -04:00
guerler 082c8952e0 Undo initial errors 2015-09-29 15:59:25 -04:00
guerler 6d00f38f0a Merge branch 'dev' of https://github.com/galaxyproject/galaxy into tool_form_003
Conflicts:
	client/galaxy/scripts/mvc/tools/tools-form.js
	static/maps/mvc/tools/tools-form.js.map
	static/scripts/mvc/tools/tools-form.js
2015-09-29 15:55:59 -04:00
Daniel Blankenberg 6406276146 Merge pull request #806 from martenson/data-lib-work
UI and API for data library folders management
2015-09-29 14:15:11 -04:00
Nate Coraor 90dc2b1093 Merge branch 'release_15.07' into dev 2015-09-29 13:55:22 -04:00
Martin Cech 10c915bb62 Merge branch 'dev' into data-lib-work
Conflicts:
	static/maps/mvc/library/library-foldertoolbar-view.js.map
	static/scripts/mvc/library/library-foldertoolbar-view.js

also re-grunted
2015-09-28 11:40:35 -04:00
Martin Cech 796f803df0 provide UI to delete and udelete lib folders; slight refactor 2015-09-28 11:38:35 -04:00
guerler 7777ea8f91 Extend large ui-messages to cover states (info, warning, danger, success) 2015-09-28 02:16:57 -04:00
guerler c1faf48d81 Add large message style and use for initial tool loading notifications 2015-09-28 01:48:07 -04:00
Daniel Blankenberg e52b9ac255 Show tool parameter errors on initial tool form load. Needed for e.g. proper rerun display behavoir. 2015-09-25 16:42:31 -04:00
carlfeberhard 12ada39cdd Fix to b58c720: only request creating_job and rerunnable 2015-09-24 17:25:13 -04:00
carlfeberhard e1aad97759 Fix to b58c720: add creating_job to info needed for re-run button 2015-09-24 16:41:49 -04:00