mirror of
https://github.com/galaxyproject/galaxy.git
synced 2026-09-24 16:30:27 +08:00
provide UI to delete and udelete lib folders; slight refactor
This commit is contained in:
Martin Cech
@@ -263,6 +263,11 @@ var FolderListView = Backbone.View.extend({
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* Currently supports only sorting by name.
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*/
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sortFolder: function(sort_by, order){
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console.log('sorting');
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// default to asc sort by name
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if (sort_by === 'undefined' && order === 'undefined'){
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return this.collection.sortByNameAsc();
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}
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if (sort_by === 'name'){
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if (order === 'asc'){
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return this.collection.sortByNameAsc();
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@@ -15,7 +15,8 @@ var FolderRowView = Backbone.View.extend({
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lastSelectedHistory: '',
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events: {
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'click .undelete_dataset_btn' : 'undelete_dataset'
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'click .undelete_dataset_btn' : 'undeleteDataset',
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'click .undelete_folder_btn' : 'undeleteFolder'
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},
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options: {
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@@ -29,16 +30,23 @@ var FolderRowView = Backbone.View.extend({
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render: function(folder_item){
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var template = null;
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if (folder_item.get('type') === 'folder'){
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if (folder_item.get('type') === 'folder' || folder_item.get('model_class') === 'LibraryFolder'){
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this.options.type = 'folder';
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template = this.templateRowFolder();
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} else {
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if (folder_item.get('deleted')){
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template = this.templateRowDeletedFolder();
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} else{
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template = this.templateRowFolder();
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}
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} else if (folder_item.get('type') === 'file' || folder_item.get('model_class') === 'LibraryDataset'){
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this.options.type = 'file';
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if (folder_item.get('deleted')){
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template = this.templateRowDeletedFile();
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} else {
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template = this.templateRowFile();
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}
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} else {
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console.error('Unknown library item type found.');
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console.error(folder_item.get('type') || folder_item.get('model_class'));
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}
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this.setElement(template({content_item:folder_item}));
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this.$el.show();
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@@ -52,7 +60,7 @@ var FolderRowView = Backbone.View.extend({
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/**
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* Undeletes the dataset on server and renders the row again.
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*/
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undelete_dataset : function(event){
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undeleteDataset : function(event){
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$(".tooltip").hide();
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var that = this;
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var dataset_id = $(event.target).closest('tr')[0].id;
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@@ -63,6 +71,7 @@ var FolderRowView = Backbone.View.extend({
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Galaxy.libraries.folderListView.collection.remove(dataset_id);
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var updated_dataset = new mod_library_model.Item(response);
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Galaxy.libraries.folderListView.collection.add(updated_dataset);
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Galaxy.libraries.folderListView.collection.sortByNameAsc();
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mod_toastr.success('Dataset undeleted. Click this to see it.', '', {onclick: function() {
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var folder_id = that.model.get('folder_id');
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window.location='#folders/' + folder_id + '/datasets/' + that.id;
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@@ -78,6 +87,33 @@ var FolderRowView = Backbone.View.extend({
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});
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},
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/**
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* Undeletes the folder on server and renders the row again.
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*/
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undeleteFolder : function(event){
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$(".tooltip").hide();
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var that = this;
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var folder_id = $(event.target).closest('tr')[0].id;
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var folder = Galaxy.libraries.folderListView.collection.get(folder_id);
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folder.url = folder.urlRoot + folder.id + '?undelete=true';
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folder.destroy({
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success : function(model, response){
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Galaxy.libraries.folderListView.collection.remove(folder_id);
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var updated_folder = new mod_library_model.FolderAsModel(response);
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Galaxy.libraries.folderListView.collection.add(updated_folder);
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Galaxy.libraries.folderListView.collection.sortByNameAsc();
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mod_toastr.success('Folder undeleted.');
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},
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error : function(model, response){
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if (typeof response.responseJSON !== "undefined"){
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mod_toastr.error('Folder was not undeleted. ' + response.responseJSON.err_msg);
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} else {
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mod_toastr.error('An error occured! Folder was not undeleted. Please try again.');
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}
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}
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});
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},
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templateRowFolder: function() {
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tmpl_array = [];
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@@ -138,6 +174,26 @@ var FolderRowView = Backbone.View.extend({
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tmpl_array.push(' <td><span data-toggle="tooltip" data-placement="top" title="Marked deleted" style="color:grey;" class="fa fa-ban fa-lg"> </span><button data-toggle="tooltip" data-placement="top" title="Undelete <%- content_item.get("name") %>" class="primary-button btn-xs undelete_dataset_btn show_on_hover" type="button" style="display:none; margin-left:1em;"><span class="fa fa-unlock"> Undelete</span></button></td>');
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tmpl_array.push('</tr>');
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return _.template(tmpl_array.join(''));
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},
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templateRowDeletedFolder: function(){
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tmpl_array = [];
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tmpl_array.push('<tr class="active folder_row light library-row" id="<%- content_item.id %>">');
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tmpl_array.push(' <td>');
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tmpl_array.push(' <span title="Folder" class="fa fa-folder-o"></span>');
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tmpl_array.push(' </td>');
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tmpl_array.push(' <td></td>');
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tmpl_array.push(' <td style="color:grey;">');
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tmpl_array.push(' <%- content_item.get("name") %>');
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tmpl_array.push(' </td>');
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tmpl_array.push(' <td>folder</td>');
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tmpl_array.push(' <td></td>');
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tmpl_array.push(' <td><%= _.escape(content_item.get("update_time")) %></td>'); // time updated
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tmpl_array.push(' <td><span data-toggle="tooltip" data-placement="top" title="Marked deleted" style="color:grey;" class="fa fa-ban fa-lg"> </span><button data-toggle="tooltip" data-placement="top" title="Undelete <%- content_item.get("name") %>" class="primary-button btn-xs undelete_folder_btn show_on_hover" type="button" style="display:none; margin-left:1em;"><span class="fa fa-unlock"> Undelete</span></button></td>');
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tmpl_array.push('</tr>');
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return _.template(tmpl_array.join(''));
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}
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@@ -863,37 +863,45 @@ var FolderToolbarView = Backbone.View.extend({
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* call them in chain. Update progress bar in between each.
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* @param {array} lddas_set array of lddas to delete
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*/
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chainCallDeletingHdas: function( lddas_set ){
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chainCallDeletingItems: function( items_to_delete ){
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var self = this;
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this.deleted_lddas = new mod_library_model.Folder();
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var popped_item = lddas_set.pop();
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this.deleted_items = new mod_library_model.Folder();
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var popped_item = items_to_delete.pop();
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if ( typeof popped_item === "undefined" ) {
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if ( this.options.chain_call_control.failed_number === 0 ){
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mod_toastr.success( 'Selected datasets were deleted.' );
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mod_toastr.success( 'Selected items were deleted.' );
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} else if ( this.options.chain_call_control.failed_number === this.options.chain_call_control.total_number ){
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mod_toastr.error( 'There was an error and no datasets were deleted. Please make sure you have sufficient permissions.' );
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mod_toastr.error( 'There was an error and no items were deleted. Please make sure you have sufficient permissions.' );
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} else if ( this.options.chain_call_control.failed_number < this.options.chain_call_control.total_number ){
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mod_toastr.warning( 'Some of the datasets could not be deleted. Please make sure you have sufficient permissions.' );
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mod_toastr.warning( 'Some of the items could not be deleted. Please make sure you have sufficient permissions.' );
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}
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Galaxy.modal.hide();
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return this.deleted_lddas;
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return this.deleted_items;
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}
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var promise = $.when( popped_item.destroy() );
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promise.done( function( dataset ){
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promise.done( function( item ){
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Galaxy.libraries.folderListView.collection.remove( popped_item.id );
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self.updateProgress();
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// add the deleted dataset to collection, triggers rendering
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// add the deleted item to collection, triggers rendering
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if ( Galaxy.libraries.folderListView.options.include_deleted ){
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var updated_dataset = new mod_library_model.Item( dataset );
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Galaxy.libraries.folderListView.collection.add( updated_dataset );
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var updated_item = null;
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if (item.type === 'folder' || item.model_class === 'LibraryFolder'){
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updated_item = new mod_library_model.FolderAsModel( item );
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} else if (item.type === 'file' || item.model_class === 'LibraryDataset'){
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updated_item = new mod_library_model.Item( item );
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} else {
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console.error('Unknown library item type found.');
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console.error(item.type || item.model_class);
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}
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Galaxy.libraries.folderListView.collection.add( updated_item );
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}
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self.chainCallDeletingHdas( lddas_set );
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self.chainCallDeletingItems( items_to_delete );
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})
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.fail( function(){
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self.options.chain_call_control.failed_number += 1;
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self.updateProgress();
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self.chainCallDeletingHdas( lddas_set );
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self.chainCallDeletingItems( items_to_delete );
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});
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},
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@@ -931,29 +939,35 @@ var FolderToolbarView = Backbone.View.extend({
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this.options.chain_call_control.failed_number = 0;
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var dataset_ids = [];
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var folder_ids = [];
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checkedValues.each(function(){
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if (this.parentElement.parentElement.id !== '') {
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if (this.parentElement.parentElement.id.substring(0,1) == 'F'){
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mod_toastr.error('Deleting folders is not implemented yet');
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folder_ids.push(this.parentElement.parentElement.id);
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} else {
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dataset_ids.push(this.parentElement.parentElement.id);
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}
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}
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});
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// init the progress bar
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this.progressStep = 100 / dataset_ids.length;
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var items_total = dataset_ids.length + folder_ids.length
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this.progressStep = 100 / items_total;
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this.progress = 0;
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// prepare the dataset items to be added
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var lddas_to_delete = [];
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var items_to_delete = [];
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for (var i = dataset_ids.length - 1; i >= 0; i--) {
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var dataset = new mod_library_model.Item({id:dataset_ids[i]});
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lddas_to_delete.push(dataset);
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items_to_delete.push(dataset);
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}
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for (var i = folder_ids.length - 1; i >= 0; i--) {
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var folder = new mod_library_model.FolderAsModel({id:folder_ids[i]});
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items_to_delete.push(folder);
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}
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this.options.chain_call_control.total_number = dataset_ids.length;
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this.options.chain_call_control.total_number = items_total.length;
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// call the recursive function to call ajax one after each other (request FIFO queue)
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this.chainCallDeletingHdas(lddas_to_delete);
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this.chainCallDeletingItems(items_to_delete);
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}
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},
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@@ -83,20 +83,19 @@ define([], function() {
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// ============================================================================
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// FOLDER RELATED MODELS
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var Item = Backbone.Model.extend({
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var LibraryItem = Backbone.Model.extend({
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});
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var Ldda = LibraryItem.extend({
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urlRoot : ( window.galaxy_config ? galaxy_config.root : '/' ) + 'api/libraries/datasets/'
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});
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var Ldda = Backbone.Model.extend({
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urlRoot : ( window.galaxy_config ? galaxy_config.root : '/' ) + 'api/libraries/datasets/'
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});
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var FolderAsModel = Backbone.Model.extend({
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urlRoot: ( window.galaxy_config ? galaxy_config.root : '/' ) + 'api/folders'
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var FolderAsModel = LibraryItem.extend({
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urlRoot: ( window.galaxy_config ? galaxy_config.root : '/' ) + 'api/folders/'
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});
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var Folder = Backbone.Collection.extend({
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model: Item,
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model: LibraryItem,
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/** Sort collection by item name (ascending) and return the sorted
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* collection. Folders go before datasets.
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@@ -150,16 +149,28 @@ define([], function() {
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});
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var FolderContainer = Backbone.Model.extend({
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defaults : {
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folder : new Folder(),
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urlRoot : ( window.galaxy_config ? galaxy_config.root : '/' ) + 'api/folders/',
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id : "unknown"
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},
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parse : function(obj) {
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// response is not a simple array, it contains metadata
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// this will update the inner collection
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this.get("folder").reset(obj.folder_contents);
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return obj;
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defaults : {
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folder : new Folder(),
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urlRoot : ( window.galaxy_config ? galaxy_config.root : '/' ) + 'api/folders/',
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id : "unknown"
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},
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parse : function(obj) {
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// empty the collection
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this.get("folder").reset();
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// response is not a simple array, it contains metadata
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// this will update the inner collection
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for (var i = 0; i < obj.folder_contents.length; i++) {
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if (obj.folder_contents[i].type === 'folder'){
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var folder_item = new FolderAsModel(obj.folder_contents[i])
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this.get("folder").add(folder_item);
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} else if(obj.folder_contents[i].type === 'file'){
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var file_item = new Ldda(obj.folder_contents[i])
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this.get("folder").add(file_item);
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} else{
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console.error('Unknown folder item type encountered while parsing response.');
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}
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};
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return obj;
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}
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});
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@@ -204,10 +215,10 @@ define([], function() {
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return {
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Library: Library,
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FolderAsModel : FolderAsModel,
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Libraries : Libraries,
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Item : Item,
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Item : Ldda,
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Ldda : Ldda,
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FolderAsModel : FolderAsModel,
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Folder : Folder,
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FolderContainer : FolderContainer,
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HistoryItem : HistoryItem,
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@@ -152,7 +152,7 @@ class FolderManager( object ):
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changed = False
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if not trans.user_is_admin():
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if not self.check_manageable( trans, folder ):
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raise InsufficientPermissionsException( "You do not have proper permission to update library folders." )
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raise InsufficientPermissionsException( "You do not have proper permission to update the library folder." )
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if folder.deleted == True:
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raise ItemAccessibilityException( "You cannot update deleted library folder. Undelete it first." )
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if name is not None and name != folder.name:
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@@ -229,16 +229,16 @@ class FoldersController( BaseAPIController, UsesLibraryMixin, UsesLibraryMixinIt
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return self.folder_manager.get_current_roles( trans, folder )
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@expose_api
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def delete( self, trans, id, **kwd ):
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def delete( self, trans, encoded_folder_id, **kwd ):
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"""
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delete( self, trans, id, **kwd )
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* DELETE /api/folders/{id}
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marks the folder with the given ``id`` as `deleted` (or removes the `deleted` mark if the `undelete` param is true)
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delete( self, trans, encoded_folder_id, **kwd )
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* DELETE /api/folders/{encoded_folder_id}
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marks the folder with the given ``encoded_folder_id`` as `deleted` (or removes the `deleted` mark if the `undelete` param is true)
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.. note:: Currently, only admin users can un/delete folders.
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:param id: the encoded id of the folder to un/delete
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:type id: an encoded id string
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:param encoded_folder_id: the encoded id of the folder to un/delete
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:type encoded_folder_id: an encoded id string
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:param undelete: (optional) flag specifying whether the item should be deleted or undeleted, defaults to false:
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:type undelete: bool
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@@ -247,10 +247,11 @@ class FoldersController( BaseAPIController, UsesLibraryMixin, UsesLibraryMixinIt
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:rtype: dictionary
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"""
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folder = self.folder_manager.get( trans, self.folder_manager.cut_and_decode( trans, id ), True )
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folder = self.folder_manager.get( trans, self.folder_manager.cut_and_decode( trans, encoded_folder_id ), True )
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undelete = util.string_as_bool( kwd.get( 'undelete', False ) )
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folder = self.folder_manager.delete( trans, folder, undelete )
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folder_dict = self.folder_manager.get_folder_dict( trans, folder )
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folder_dict['update_time'] = folder.update_time.strftime( "%Y-%m-%d %I:%M %p" )
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return folder_dict
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@expose_api
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@@ -487,6 +487,12 @@ def populate_api_routes( webapp, app ):
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action='create',
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conditions=dict( method=[ "POST" ] ) )
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webapp.mapper.connect( 'delete_folder',
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'/api/folders/{encoded_folder_id}',
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controller='folders',
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action='delete',
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conditions=dict( method=[ "DELETE" ] ) )
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webapp.mapper.connect( 'update_folder',
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'/api/folders/{encoded_folder_id}',
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controller='folders',
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File diff suppressed because one or more lines are too long
@@ -1 +1 @@
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define([],function(){var a=Backbone.Model.extend({urlRoot:(window.galaxy_config?galaxy_config.root:"/")+"api/libraries/",isVisible:function(a){var b=!0;return!a&&this.get("deleted")&&(b=!1),b}}),b=Backbone.Collection.extend({url:(window.galaxy_config?galaxy_config.root:"/")+"api/libraries",model:a,sort_key:"name",sort_order:null,initialize:function(a){a=a||{}},getVisible:function(a,c){c=c||[];var d=new b(this.filter(function(b){return b.isVisible(a)}));return d},sortByNameAsc:function(){return this.comparator=function(a,b){return a.get("name").toLowerCase()>b.get("name").toLowerCase()?1:b.get("name").toLowerCase()>a.get("name").toLowerCase()?-1:0},this.sort(),this},sortByNameDesc:function(){return this.comparator=function(a,b){return a.get("name").toLowerCase()>b.get("name").toLowerCase()?-1:b.get("name").toLowerCase()>a.get("name").toLowerCase()?1:0},this.sort(),this}}),c=Backbone.Model.extend({urlRoot:(window.galaxy_config?galaxy_config.root:"/")+"api/libraries/datasets/"}),d=Backbone.Model.extend({urlRoot:(window.galaxy_config?galaxy_config.root:"/")+"api/libraries/datasets/"}),e=Backbone.Model.extend({urlRoot:(window.galaxy_config?galaxy_config.root:"/")+"api/folders"}),f=Backbone.Collection.extend({model:c,sortByNameAsc:function(){return this.comparator=function(a,b){return a.get("type")===b.get("type")?a.get("name").toLowerCase()>b.get("name").toLowerCase()?1:b.get("name").toLowerCase()>a.get("name").toLowerCase()?-1:0:"folder"===a.get("type")?-1:1},this.sort(),this},sortByNameDesc:function(){return this.comparator=function(a,b){return a.get("type")===b.get("type")?a.get("name").toLowerCase()>b.get("name").toLowerCase()?-1:b.get("name").toLowerCase()>a.get("name").toLowerCase()?1:0:"folder"===a.get("type")?-1:1},this.sort(),this}}),g=Backbone.Model.extend({defaults:{folder:new f,urlRoot:(window.galaxy_config?galaxy_config.root:"/")+"api/folders/",id:"unknown"},parse:function(a){return this.get("folder").reset(a.folder_contents),a}}),h=Backbone.Model.extend({urlRoot:(window.galaxy_config?galaxy_config.root:"/")+"api/histories/"}),i=Backbone.Collection.extend({urlRoot:(window.galaxy_config?galaxy_config.root:"/")+"api/histories/",initialize:function(a){this.id=a.id},url:function(){return this.urlRoot+this.id+"/contents"},model:h}),j=Backbone.Model.extend({urlRoot:(window.galaxy_config?galaxy_config.root:"/")+"api/histories/"}),k=Backbone.Collection.extend({url:(window.galaxy_config?galaxy_config.root:"/")+"api/histories",model:j}),l=Backbone.Model.extend({urlRoot:(window.galaxy_config?galaxy_config.root:"/")+"api/remote_files"});return{Library:a,FolderAsModel:e,Libraries:b,Item:c,Ldda:d,Folder:f,FolderContainer:g,HistoryItem:h,HistoryContents:i,GalaxyHistory:j,GalaxyHistories:k,Jstree:l}});
|
||||
define([],function(){var a=Backbone.Model.extend({urlRoot:(window.galaxy_config?galaxy_config.root:"/")+"api/libraries/",isVisible:function(a){var b=!0;return!a&&this.get("deleted")&&(b=!1),b}}),b=Backbone.Collection.extend({url:(window.galaxy_config?galaxy_config.root:"/")+"api/libraries",model:a,sort_key:"name",sort_order:null,initialize:function(a){a=a||{}},getVisible:function(a,c){c=c||[];var d=new b(this.filter(function(b){return b.isVisible(a)}));return d},sortByNameAsc:function(){return this.comparator=function(a,b){return a.get("name").toLowerCase()>b.get("name").toLowerCase()?1:b.get("name").toLowerCase()>a.get("name").toLowerCase()?-1:0},this.sort(),this},sortByNameDesc:function(){return this.comparator=function(a,b){return a.get("name").toLowerCase()>b.get("name").toLowerCase()?-1:b.get("name").toLowerCase()>a.get("name").toLowerCase()?1:0},this.sort(),this}}),c=Backbone.Model.extend({}),d=c.extend({urlRoot:(window.galaxy_config?galaxy_config.root:"/")+"api/libraries/datasets/"}),e=c.extend({urlRoot:(window.galaxy_config?galaxy_config.root:"/")+"api/folders/"}),f=Backbone.Collection.extend({model:c,sortByNameAsc:function(){return this.comparator=function(a,b){return a.get("type")===b.get("type")?a.get("name").toLowerCase()>b.get("name").toLowerCase()?1:b.get("name").toLowerCase()>a.get("name").toLowerCase()?-1:0:"folder"===a.get("type")?-1:1},this.sort(),this},sortByNameDesc:function(){return this.comparator=function(a,b){return a.get("type")===b.get("type")?a.get("name").toLowerCase()>b.get("name").toLowerCase()?-1:b.get("name").toLowerCase()>a.get("name").toLowerCase()?1:0:"folder"===a.get("type")?-1:1},this.sort(),this}}),g=Backbone.Model.extend({defaults:{folder:new f,urlRoot:(window.galaxy_config?galaxy_config.root:"/")+"api/folders/",id:"unknown"},parse:function(a){this.get("folder").reset();for(var b=0;b<a.folder_contents.length;b++)if("folder"===a.folder_contents[b].type){var c=new e(a.folder_contents[b]);this.get("folder").add(c)}else if("file"===a.folder_contents[b].type){var f=new d(a.folder_contents[b]);this.get("folder").add(f)}return a}}),h=Backbone.Model.extend({urlRoot:(window.galaxy_config?galaxy_config.root:"/")+"api/histories/"}),i=Backbone.Collection.extend({urlRoot:(window.galaxy_config?galaxy_config.root:"/")+"api/histories/",initialize:function(a){this.id=a.id},url:function(){return this.urlRoot+this.id+"/contents"},model:h}),j=Backbone.Model.extend({urlRoot:(window.galaxy_config?galaxy_config.root:"/")+"api/histories/"}),k=Backbone.Collection.extend({url:(window.galaxy_config?galaxy_config.root:"/")+"api/histories",model:j}),l=Backbone.Model.extend({urlRoot:(window.galaxy_config?galaxy_config.root:"/")+"api/remote_files"});return{Library:a,Libraries:b,Item:d,Ldda:d,FolderAsModel:e,Folder:f,FolderContainer:g,HistoryItem:h,HistoryContents:i,GalaxyHistory:j,GalaxyHistories:k,Jstree:l}});
|
||||
//# sourceMappingURL=../../../maps/mvc/library/library-model.js.map
|
||||
Reference in New Issue
Block a user