Commit Graph
20 Commits
Author SHA1 Message Date
Nicola Soranzo 9b4de72ca6 Fix all E722 errors and ignore E741
Introduced in flake8 3.5.0
Fix import order.
2017-10-24 11:29:09 +01:00
Nicola Soranzo 21b44bf348 Fix all E201 and E202 style errors
using the following command:
```
autopep8 -i -r --exclude $(sed -e 's|^|./|' -e 's|/$||' .ci/flake8_blacklist.txt | paste -sd,) --select E201,E202 .
```
2017-08-17 11:35:39 +01:00
Nicola Soranzo 1d17a29c79 Fixes for pycodestyle 2.2.0 2016-11-15 16:56:50 +00:00
Nicola Soranzo 11b4f3a60c Fix import order and Python3 compatibility for tools/
xref #1715
2016-09-29 19:26:22 +01:00
Nicola Soranzo 8a43b2b492 Python 3: use "as" instead of comma in except clause 2016-05-17 23:53:16 +01:00
Nicola Soranzo ed4132d9c0 Python3: Use open() instead of file() 2016-05-17 23:53:16 +01:00
Nicola Soranzo 39da6c3278 Fix the remaining 2180 flake8 errors in tools/ . 2016-02-10 18:46:03 +00:00
Nicola Soranzo 22d4a1d8c3 dos2unix of tools/ directory. Some whitespace and PEP-8 fixes. 2015-05-15 12:40:52 +01:00
Aysam Guerler 9ba585f805 Fix tool tip for compute quality statistics 2013-03-19 12:04:24 -04:00
Jeremy Goecks 9a5679c37c Use mako template in tool help so that dynamic image paths can be used. Fixes #141 2012-08-07 09:40:51 -04:00
Kanwei Li 2d0b8eb830 Adjust image links in tools to work with a proxy prefix [Brad Chapman]. Fixes #141 2010-12-14 14:22:13 -05:00
Kanwei Li 2f230a0d18 Fix solid_qual_stats tool when value is 0 or not a valid int. Fixes #405 2010-10-26 13:46:03 -04:00
Nate Coraor 7c71894533 Remove obsolete binseq.zip and txtseq.zip formats, and allow for uploading single files in a zip archive. Adapted from a patch from Pablo Cingolani. 2010-06-23 16:48:13 -04:00
Kanwei Li 0952b28502 Sync hashbangs 2010-04-01 20:36:31 -04:00
Kanwei Li a947686b77 fix some typos for tools in folders N-Z 2009-09-25 02:06:03 -04:00
Anton Nekrutenko 13c7b84abb Second pass of help and interface updates. Not done yet... 2009-09-22 08:59:36 -04:00
Guruprasad Anada 739e786bc1 Adding qualsolid_boxplot_graph.sh script used by SOLiD quality boxplot tool to the distribution. 2009-09-18 14:21:59 -04:00
Anton Nekrutenko bf9666bf21 Fixed a stupid and truly horrible paired end splitter bug 2009-08-20 17:33:39 -04:00
Guruprasad Anada 24293166da MAQ mapping pipeline for SOLiD data 2009-05-13 21:54:45 -04:00
Guruprasad Anada 4f1a6fe60f Added SOLiD tool section with QC tools. 2009-05-05 22:44:30 -04:00