Commit Graph
83570 Commits
Author SHA1 Message Date
David López 1908fbf9c0 Merge pull request #20275 from guerler/fix_theme_selector
[25.0] Fix theme selector
2025-05-19 12:35:00 +02:00
Marius van den Beek e2ad28d9c8 Merge pull request #20266 from mvdbeek/extend_custom_tool_schema
[25.0] Add more descriptions to custom tool source schema
2025-05-19 10:45:25 +02:00
Marius van den Beek afefbbbc8a Merge pull request #20271 from guerler/tabulator.000
[25.0] Improve handling of very large files in Tabulator
2025-05-18 10:41:24 +02:00
Ahmed Hamid Awan 7e9cf090dc Merge pull request #20277 from guerler/fix_headers
[25.0] Fix inconsistent header sizes
2025-05-18 02:56:44 +05:00
guerler 1ec265d1bd Adjust Workflow and other BreadCrumbHeaders for consistency 2025-05-17 16:47:45 -04:00
guerler 9184d515e4 Adjust notifications header button for consistency 2025-05-17 16:36:46 -04:00
guerler 2113c6e3cb Unify header size across user interface for consistency 2025-05-17 16:33:39 -04:00
guerler b164d346cd Fix theme selectors computed value getter 2025-05-17 14:21:39 -04:00
guerler 9ddaff343f Update tabulator version, improve handling of very large files
Use Math.ceil when determining page count
2025-05-17 13:04:23 -04:00
mvdbeek 0e13bacee5 Provide more field annotations 2025-05-17 18:58:15 +02:00
Ahmed Hamid Awan ceaf544668 Merge pull request #20267 from ahmedhamidawan/version-25.0.rc1
[25.0] Update version to 25.0.rc1
2025-05-16 23:05:57 +05:00
Ahmed Awan 669e4d54f5 Update version to 25.0.rc1 2025-05-16 12:07:36 -05:00
Ahmed Hamid Awan 4d1da5acac Merge pull request #20265 from ahmedhamidawan/dev_250_migrationtags
Add 25.0 migration tags
2025-05-16 21:51:35 +05:00
mvdbeek e2678e7088 Upgrade monaco-yaml 2025-05-16 18:46:13 +02:00
Ahmed Awan db80c5c03e Add 25.0 migration tags 2025-05-16 11:45:19 -05:00
Marius van den Beek dcfa9bb8cd Merge pull request #20260 from common-workflow-lab/metadata-CONVERTER_tar_to_directory
Fix tool-provided metadata for CONVERTER_tar_to_directory
2025-05-16 16:52:32 +02:00
mvdbeek a4bad06a06 Merge branch 'release_24.2' into dev 2025-05-16 16:24:49 +02:00
mvdbeek 2156e2d98e Merge branch 'release_24.1' into release_24.2 2025-05-16 16:23:56 +02:00
mvdbeek 9a0d482f1a Merge branch 'release_24.0' into release_24.1 2025-05-16 16:23:36 +02:00
Marius van den Beek 36ea7dadde Merge pull request #20259 from mvdbeek/fix_rerun_button_dynamic_tools
Fix job rerun for dynamic tools
2025-05-16 16:23:08 +02:00
Marius van den Beek 400a9f605b Merge pull request #20258 from mvdbeek/fix_job_summary
[24.0] Fall back to name in job summary if no input label given
2025-05-16 16:22:52 +02:00
Nicola Soranzo 663c08aec4 Fix tool-provided metadata for CONVERTER_tar_to_directory
The metadata are in the "default" (not "legacy") format, so need to
use a newer tool profile.

Also:
- Use CDATA and `&&` in command
2025-05-16 15:13:16 +02:00
Dannon 45fdb1de97 Merge pull request #20244 from dannon/group-it-versions
[25.0] Group Tool Versions in IT Panel
2025-05-16 07:40:02 -04:00
Marius van den Beek f87df96220 Merge pull request #20247 from mvdbeek/fix_activity_bar_in_setting
Only show custom tool editor in activity bar settings when user has access
2025-05-16 12:18:39 +02:00
mvdbeek 3eaa78b745 Fix job rerun for dynamic tools
Fixes https://github.com/galaxyproject/galaxy/issues/20255
2025-05-16 12:17:42 +02:00
mvdbeek 65df554439 Fall back to name in job summary if no input label given 2025-05-16 11:07:41 +02:00
mvdbeek 82e700dab1 Don't show user-defined-tools in activity bar settings if user doesn't have access 2025-05-16 11:06:37 +02:00
Marius van den Beek fdeb70dc8e Merge pull request #20245 from dannon/vue-tsc-again 2025-05-16 09:06:40 +02:00
Dannon Baker cf7091f9c7 Fix vue-tsc issue in ParameterStep; ensure items have valid IDs before rendering 2025-05-15 20:52:22 -04:00
Dannon Baker 4eb42ae8ce Additional tests including running IT display for InteractiveToolsPanel. 2025-05-15 18:02:11 -04:00
Dannon Baker 8935ae6d66 Refactoring tool-version handling into a separate util 2025-05-15 17:20:29 -04:00
Dannon Baker d906996de8 Fix version filtering logic in InteractiveToolsPanel to handle version suffixes and improve test coverage 2025-05-15 17:20:29 -04:00
Dannon Baker 0c84885b95 Group tools by lineage for interactiveToolPanel, add testing
Needs refactoring to align with tool panel and use the same infra
2025-05-15 17:20:29 -04:00
Laila Los 3d6dd63c07 Merge pull request #20232 from jmchilton/file_drop_bug
Bug fix - allow file drops into PasteData widget.
2025-05-15 21:59:01 +02:00
Dannon e111b50dc1 Merge pull request #19581 from ksuderman/anvil-theme
Support setting masthead height in a theme
2025-05-15 14:41:56 -04:00
Dannon 2cf27ac352 Merge branch 'dev' into anvil-theme 2025-05-15 10:55:23 -04:00
John Chilton a2e5b43230 Bug fix - allow file drops into PasteData widget.
Fixes https://github.com/galaxyproject/galaxy/issues/20231.
2025-05-15 10:22:18 -04:00
Marius van den Beek da98c8b897 Merge pull request #20226 from davelopez/zip_explorer_refactor_remove_indexdb
Use TUS streaming and remove redundant IndexDB temp store in Zip Explorer
2025-05-15 15:47:50 +02:00
Marius van den Beek e807b0ff7c Merge pull request #20190 from dannon/preferred-viz
Visualization-First Display functionality
2025-05-15 15:46:53 +02:00
mvdbeek 9992ec7f65 Drop unused buttons, fix visualizations tour 2025-05-15 14:26:26 +02:00
mvdbeek 45d17efe58 Fix tour selectors 2025-05-15 14:19:14 +02:00
mvdbeek fd392b805a Fix test_charts_h5web, drop test_charts_nvd3_bar since there's no nvd3_bar anymore 2025-05-15 14:19:13 +02:00
mvdbeek 56dbc10c95 Always display eye icon 2025-05-15 14:19:13 +02:00
mvdbeek 93f081d1c2 Selenium test fixes 2025-05-15 14:19:13 +02:00
davelopez 0becc4a053 Refactor type 2025-05-15 13:22:16 +02:00
davelopez 1d495a531b Fix fingerprint generation in upload for FileStream 2025-05-15 12:42:31 +02:00
davelopez 8ff1624d83 Refactor upload logic in useZipExplorer to utilize streaming for file uploads 2025-05-15 12:37:41 +02:00
davelopez 833bde1a05 Add FileStream interface and update upload logic for streaming files 2025-05-15 12:37:15 +02:00
Dannon Baker 28f872cb93 linting fixes in selectdataset and formrecordfielddefinitions (from upstream) 2025-05-14 18:28:57 -04:00
Dannon Baker 34e1ceec45 Fix vue-tsc emit definition issue 2025-05-14 18:24:42 -04:00