Commit Graph
1027 Commits
Author SHA1 Message Date
mvdbeek 0f2ef4dc0c Merge branch 'release_23.1' into dev 2023-09-14 13:43:50 +02:00
Dannon Baker 0cd7a0cd7a Update galaxyproject/charts utilizing visualizations to match the latest version which uses the modern api for deleting. 2023-09-11 13:45:02 -04:00
mvdbeek 913182fac9 Merge branch 'release_23.1' into dev 2023-08-31 13:04:47 +02:00
mvdbeek 6bb9bc6947 Merge branch 'release_23.0' into release_23.1 2023-08-31 13:01:55 +02:00
mvdbeek 1e96970084 Merge branch 'release_22.05' into release_23.0 2023-08-31 13:01:10 +02:00
mvdbeek d52527216e Merge branch 'release_22.01' into release_22.05 2023-08-31 12:57:56 +02:00
Assunta DeSanto e412b5db8b passing identifier for div to write the chart panel to 2023-08-25 14:17:06 -04:00
mvdbeek c62da4aa33 Merge branch 'release_23.1' into dev 2023-08-09 16:06:08 +02:00
Aysam Guerler 085132d118 Merge pull request #16119 from mahendrapaipuri/update_visu_plugins
Fix and update visualization plugins
2023-08-09 09:23:35 +02:00
Dannon Baker a6cd891a23 Add explicit dependency for buffer polyfill 2023-08-03 08:43:22 -04:00
Dannon Baker 86caa8e18c Swap react to use createRoot in v18 style, formatting. 2023-08-02 23:09:19 -04:00
Dannon Baker 49d67b3e36 Upgrade parcel for h5web, drop a couple unused deps. 2023-08-02 22:47:42 -04:00
Dannon Baker 779ee9a5a8 Upgrade h5 to v8. 2023-08-02 20:52:45 -04:00
francoismg 7537d71714 added parcel-bundler as a dependency 2023-06-09 07:28:36 +02:00
francoismg 98f1442f45 aladin fits viewer integration prototype 2023-06-05 02:00:40 +02:00
mahendrapaipuri 47536b3211 Use window.parent.options to get baseurl
Move worker-stats.js file to static so that plugin can find it

Update compiled scatterplot.js with above changes
2023-05-19 17:28:18 +02:00
mahendrapaipuri 090f531b10 Avoid adding galaxy prefix twice to dataset url 2023-05-19 17:25:33 +02:00
mahendrapaipuri 1c8821b35c Add galaxy prefix to dataset url 2023-05-19 17:24:32 +02:00
mahendrapaipuri 4171eba339 Calculate app_root dynamically 2023-05-19 17:24:06 +02:00
mahendrapaipuri a21625bd7a Add missing arg to createContainers function 2023-05-19 17:23:31 +02:00
mahendrapaipuri 265082a471 Add galaxy prefix to url 2023-05-19 17:23:11 +02:00
mahendrapaipuri ae3fc5044c Add jquery.min.js and load it in HTML 2023-05-19 17:22:26 +02:00
mahendrapaipuri dd5f65ca89 Append galaxy prefix to config href 2023-05-19 17:20:39 +02:00
Laila Los 3eb1072509 remove generated file from git 2023-05-05 13:02:06 +02:00
Greg Watson d914d5c289 Update @h5web to 7.1.0 2023-05-04 20:48:15 -04:00
Greg Watson ef11cb9f17 Fix linting and add type to input settings. 2023-05-04 20:48:15 -04:00
Greg Watson 27e613a7b0 Fix problems loading dataset in some instances. 2023-05-04 20:48:15 -04:00
Greg Watson 983f521ec7 Fix OpenAPI linting. Remove unused dependencies. 2023-05-04 20:48:15 -04:00
Greg Watson 8dc38e6e4c Add support for visualizing HDF5 datasets. This contribution is split into two parts: the visualization plugin and backend changes. The client code integrates the h5web visualizer into Galaxy (https://h5web.panosc.eu). The backend changes add the ability to access the contents of a dataset without needing to read the whole dataset, which is essential for large files. It is based on the h5grove API (https://github.com/silx-kit/h5grove). 2023-05-04 20:48:15 -04:00
Nate Coraor 0ac48236df Merge remote-tracking branch 'upstream/release_23.0' into dev 2023-03-10 09:11:54 -05:00
Mahendra Paipuri 710450fd9d Fix formatting errors 2023-03-08 20:28:56 -05:00
Mahendra Paipuri b65c3d0d75 Add galaxy prefix to shapefile path 2023-03-08 20:28:56 -05:00
Dannon Baker f80ec87a49 viz_base and reports app base styles, leaving toolshed alone for now pending the rewrite 2023-02-13 11:43:09 -05:00
Dannon Baker 73f2004044 Update description for phylocanvas 2023-02-07 09:29:32 -05:00
Dannon Baker f2ce00e05f Drop backbone, bootstrap, jquery, use basic alts 2023-02-07 08:47:21 -05:00
Dannon Baker 53255520d1 Set production build for phylocanvas.gl 2023-02-07 08:17:51 -05:00
Dannon Baker b7afee8eb5 Fix window resizing 2023-02-07 08:16:50 -05:00
Dannon Baker 3f54ff2f32 Revisit node manipulation later 2023-02-07 08:13:30 -05:00
Dannon Baker 9f7f903d2d Fix tree resizing 2023-02-07 08:12:36 -05:00
Dannon Baker 6d8b47c69b Fix node coloring 2023-02-07 08:07:42 -05:00
Dannon Baker 2d4c98c06c Phylocanvas initialization for new .gl 2023-02-07 07:58:50 -05:00
Dannon Baker b497c9bef9 Update available params for phylocanvas 2023-02-07 07:57:59 -05:00
Dannon Baker 6706a8cf63 Incremental progress redoing phylocanvas 2023-02-06 17:48:21 -05:00
Dannon Baker af632a6b61 Fix prefix handling in phylocanvas 2023-01-20 10:04:03 -05:00
Dannon Baker ee677ce5c8 Fix openlayers prefix handling 2023-01-20 09:43:32 -05:00
Dannon Baker 27340fe18b Fix prefix handling in msa 2023-01-20 09:31:52 -05:00
Dannon Baker 86420066d9 Fix prefix handling in drawrna 2023-01-20 09:26:43 -05:00
Dannon Baker 96d0b0585c Fix prefix handling in cytoscape 2023-01-20 09:24:12 -05:00
Dannon Baker 192586a5f2 Bug in annotate_image options handling 2023-01-20 09:02:50 -05:00
Dannon Baker f7dece8af3 Fix prefix handling in annotate_image 2023-01-20 08:59:48 -05:00