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Commit Graph
37 Commits
Author SHA1 Message Date
mvdbeek ff7565dd2d Merge branch 'release_22.05' into release_23.0 2023-07-26 14:16:34 +02:00
mvdbeek 989551dddd Externalize selenium setup with reusable workflow 2023-07-26 12:25:04 +02:00
mvdbeek b56d785d4e Use action 2023-07-26 12:25:00 +02:00
mvdbeek eee86327ab Use upstream command to install chrome and chromedriver 2023-07-26 11:17:24 +02:00
mvdbeek 37977ebed5 Bump version of chromedriver setup action 2023-07-25 14:11:04 +02:00
mvdbeek 3a2e936401 Install node from setup-node action in more tests 
Should help with nodeenv failing in CI tests, e.g.
```
Installing node into /home/runner/work/galaxy/galaxy/galaxy root/.tox/unit-coverage with nodeenv.
 * Install prebuilt node (18.12.1) .Incomplete read while readingfrom https://nodejs.org/download/release/v18.12.1/node-v18.12.1-linux-x64.tar.gz
.
Traceback (most recent call last):
  File "/home/runner/work/galaxy/galaxy/galaxy root/.tox/unit-coverage/bin/nodeenv", line 10, in <module>
    sys.exit(main())
  File "/home/runner/work/galaxy/galaxy/galaxy root/.tox/unit-coverage/lib/python3.7/site-packages/nodeenv.py", line 1104, in main
    create_environment(env_dir, args)
  File "/home/runner/work/galaxy/galaxy/galaxy root/.tox/unit-coverage/lib/python3.7/site-packages/nodeenv.py", line 980, in create_environment
    install_node(env_dir, src_dir, args)
  File "/home/runner/work/galaxy/galaxy/galaxy root/.tox/unit-coverage/lib/python3.7/site-packages/nodeenv.py", line 739, in install_node
    install_node_wrapped(env_dir, src_dir, args)
  File "/home/runner/work/galaxy/galaxy/galaxy root/.tox/unit-coverage/lib/python3.7/site-packages/nodeenv.py", line 762, in install_node_wrapped
    download_node_src(node_url, src_dir, args)
  File "/home/runner/work/galaxy/galaxy/galaxy root/.tox/unit-coverage/lib/python3.7/site-packages/nodeenv.py", line 602, in download_node_src
    with ctx as archive:
  File "/opt/hostedtoolcache/Python/3.7.16/x64/lib/python3.7/contextlib.py", line 112, in __enter__
    return next(self.gen)
  File "/home/runner/work/galaxy/galaxy/galaxy root/.tox/unit-coverage/lib/python3.7/site-packages/nodeenv.py", line 573, in tarfile_open
    tf = tarfile.open(*args, **kwargs)
  File "/opt/hostedtoolcache/Python/3.7.16/x64/lib/python3.7/tarfile.py", line 1573, in open
    saved_pos = fileobj.tell()
AttributeError: 'bytes' object has no attribute 'tell'
```
from https://github.com/galaxyproject/galaxy/actions/runs/4883207488/jobs/8714237674?pr=16036
 2023-05-04 17:35:06 +02:00
mvdbeek e84124cb82 Switch to official setup-node action for cache 2023-02-10 09:32:04 +01:00
Nicola Soranzo c1e839c570 Replace `set-output commands with $GITHUB_OUTPUT` environment file 
See https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
 2022-10-17 02:26:39 +01:00
Nicola Soranzo 2988127158 Update GitHub action versions 2022-10-17 01:21:12 +01:00
Nicola Soranzo 02da77abcb Use `${{ github.workflow }}` in concurrency group name 2022-05-17 15:09:14 +02:00
Nicola Soranzo 1155b01784 Update GitHub action versions 2022-05-04 23:05:12 +01:00
Nicola Soranzo 6524e1f344 Fix path of venv when caching 2022-03-19 03:52:23 +00:00
Nicola Soranzo 25e37dd9d5 Merge pull request #13503 from mvdbeek/metadata_strategy_extended_tests_schedule 2022-03-09 14:21:26 +00:00
mvdbeek 55aec359b0 Run extended metadata test on schedule 
Including outputs_to_working_directory, except for the integration
tests.
 2022-03-08 18:58:15 +01:00
mvdbeek 8065893ed2 Run all relevant tests with GALAXY_CONFIG_OVERRIDE_METADATA_STRATEGY: 'extended 2022-03-08 18:29:18 +01:00
mvdbeek c90e012fda Upload coverage results to codecov.io 2022-02-11 17:11:08 +01:00
Sergey Golitsynskiy bd02eaff6c Enable SA2.0 warning on api/selenium/integration tests 2022-01-18 22:02:13 -05:00
mvdbeek 574fcf3b59 Run selenium tests against /galaxypf prefix 2022-01-05 13:31:56 +01:00
Nicola Soranzo 3cb14842cc Sync Selenium GitHub workflows 
In particular:
- Cancel in-progress concurrent builds for selenium_beta workflow
- Caching of `yarn.lock` for selenium_beta
- Upload run_selenium_tests.html in case of failure for selenium workflow
 2021-11-04 03:25:29 +00:00
mvdbeek 198c59177d Add various include/exclude patterns for github workflows 2021-10-27 10:15:41 +02:00
Nicola Soranzo 3cac4cc39e Merge branch 'release_21.09' into dev 2021-10-23 12:34:40 +01:00
Nicola Soranzo 258cf8eb3a Fix invalid framework GH workflow 
Fix:
```
The workflow is not valid. .github/workflows/framework.yaml (Line: 8, Col: 1): 'env' is already defined
```

Also:
- consistently sort top-level `env` and `concurrency` (as in
  https://docs.github.com/en/actions/learn-github-actions/workflow-syntax-for-github-actions )
- sort env variables alphabetically
 2021-10-23 00:07:40 +01:00
mvdbeek 0e11349685 Merge branch 'release_21.09' into dev 2021-10-20 17:24:41 +02:00
mvdbeek b4befd02b5 Raise exception for if we're saving a historyless HDA 2021-10-18 11:42:39 +02:00
Nuwan Goonasekera baf5bc6331 Made venv cache dependent on exact python and os version. 
xref: https://github.com/python-poetry/poetry/pull/1908
xref: https://github.com/actions/setup-python/issues/182
 2021-10-04 19:24:21 +05:30
Nuwan Goonasekera ef2c5a357c Added more caching for github actions using tox and venv 2021-10-04 18:57:08 +05:30
mvdbeek 5c8898ffd9 Cancel already running job with same ref 
ref is "
The branch or tag ref that triggered the workflow run. For branches this in the format refs/heads/<branch_name>, and for tags it is refs/tags/<tag_name>.
"
 2021-06-30 16:25:29 +02:00
mvdbeek fdb36c7ed7 Run client-y tests with --frozen-lockfile 
Seems to be best-practice and may be a little faster
 2021-06-30 13:06:24 +02:00
mvdbeek bf28104dfb Cache yarn packages in tests that build client 2021-06-30 12:05:24 +02:00
Sergey Golitsynskiy 94cc475681 Update github workflows to use postgres 13 2021-04-05 15:08:34 -04:00
Sergey Golitsynskiy be4429e4fb Replace: s/postgres/posgresql in db URLs 
Was deprecated in SQLAlchemy 1.3, removed in SQLAlchemy 1.4
https://docs.sqlalchemy.org/en/14/changelog/changelog_14.html#change-3687655465c25a39b968b4f5f6e9170b
https://github.com/sqlalchemy/sqlalchemy/issues/4643
 2021-04-05 15:02:26 -04:00
Nicola Soranzo 313625ed47 Upload test results as artifact in case of failure 2021-01-02 03:37:43 +00:00
mvdbeek abf51312ad Retry failing selenium test once 
like we did on Jenkins.
 2020-11-25 14:27:01 +01:00
Oleg Zharkov 91922a9001 don't fail selenium if one step fails 2020-11-25 00:01:07 +01:00
mvdbeek f57245367d Use GALAXY_TEST_SKIP_FLAKEY_TESTS_ON_ERROR 2020-11-22 18:44:33 +01:00
mvdbeek 1bb1b1da18 Split selenium tests into 3 chunks 
Using pytest-shard
 2020-11-22 18:44:33 +01:00
mvdbeek 4f5f3dcfb2 Run selenium tests w/ pytest, github workflow 2020-11-22 18:44:33 +01:00