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Do not include invalid tools when checking for "orphan" tool dependencies in the Tool Shed.
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@@ -153,7 +153,7 @@ class DependencyDisplayer( object ):
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# Updating should cause no problems here since a tool dependency cannot be included
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# in both dictionaries.
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tool_dependencies.update( orphan_tool_dependencies )
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if tool_dependencies and ( tools or invalid_tools ):
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if tool_dependencies and tools:
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for td_key, requirements_dict in tool_dependencies.items():
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if td_key == 'set_environment':
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# "set_environment": [{"name": "R_SCRIPT_PATH", "type": "set_environment"}]
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