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Removes incorrect FALSE option for include_work_dir which makes certain jobs that discover files from working directories to fail recovering files when running through Kubernetes.

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Pablo Moreno
2016-06-14 17:14:57 +03:00
parent 2fce4553d8
commit f3d73f37a2
1 changed files with 1 additions and 2 deletions
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lib/galaxy/jobs/runners/kubernetes.py
+1 -2
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@@ -65,8 +65,7 @@ class KubernetesJobRunner(AsynchronousJobRunner):
# We currently don't need to include_metadata or include_work_dir_outputs, as working directory is the same
# were galaxy will expect results.
log.debug("Starting queue_job for job " + job_wrapper.get_id_tag())
if not self.prepare_job(job_wrapper, include_metadata=False, include_work_dir_outputs=False,
modify_command_for_container=False):
if not self.prepare_job(job_wrapper, include_metadata=False, modify_command_for_container=False):
return
job_destination = job_wrapper.job_destination