Add setup of tool-data/shared/jars to the buildbot setup script.

This commit is contained in:
Nate Coraor
2010-09-02 11:37:26 -04:00
parent ea9a6bbbe4
commit ef90e5c5b0
+10
View File
@@ -20,6 +20,8 @@ case "$OSTYPE" in
[ ! -d "$HYPHY" ] && unset HYPHY
;;
solaris2.10)
# For the psu-production builder which is Solaris, but jobs run on a
# Linux cluster
HYPHY="/galaxy/software/linux2.6-x86_64/hyphy"
;;
esac
@@ -73,6 +75,8 @@ database/import
database/pbs
"
JARS="/galaxy/software/jars"
for link in $LINKS; do
echo "Linking $link"
rm -f tool-data/`basename $link`
@@ -85,6 +89,12 @@ if [ -d "$HYPHY" ]; then
ln -sf $HYPHY tool-data/HYPHY
fi
if [ -d "$JARS" ]; then
echo "Linking $JARS"
rm -f tool-data/shared/jars
ln -sf $JARS tool-data/shared/jars
fi
for sample in $SAMPLES; do
file=`echo $sample | sed -e 's/\.sample$//'`
echo "Copying $sample to $file"