mirror of
https://github.com/galaxyproject/galaxy.git
synced 2026-09-24 16:30:27 +08:00
Add setup of tool-data/shared/jars to the buildbot setup script.
This commit is contained in:
@@ -20,6 +20,8 @@ case "$OSTYPE" in
|
||||
[ ! -d "$HYPHY" ] && unset HYPHY
|
||||
;;
|
||||
solaris2.10)
|
||||
# For the psu-production builder which is Solaris, but jobs run on a
|
||||
# Linux cluster
|
||||
HYPHY="/galaxy/software/linux2.6-x86_64/hyphy"
|
||||
;;
|
||||
esac
|
||||
@@ -73,6 +75,8 @@ database/import
|
||||
database/pbs
|
||||
"
|
||||
|
||||
JARS="/galaxy/software/jars"
|
||||
|
||||
for link in $LINKS; do
|
||||
echo "Linking $link"
|
||||
rm -f tool-data/`basename $link`
|
||||
@@ -85,6 +89,12 @@ if [ -d "$HYPHY" ]; then
|
||||
ln -sf $HYPHY tool-data/HYPHY
|
||||
fi
|
||||
|
||||
if [ -d "$JARS" ]; then
|
||||
echo "Linking $JARS"
|
||||
rm -f tool-data/shared/jars
|
||||
ln -sf $JARS tool-data/shared/jars
|
||||
fi
|
||||
|
||||
for sample in $SAMPLES; do
|
||||
file=`echo $sample | sed -e 's/\.sample$//'`
|
||||
echo "Copying $sample to $file"
|
||||
|
||||
Reference in New Issue
Block a user