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Set tool dependency status to installed if the dependency is already installed.

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This commit is contained in:
Dave Bouvier
2012-07-13 13:31:12 -04:00
parent 7992dfa449
commit e6cf2f421b
1 changed files with 4 additions and 0 deletions
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lib/galaxy/tool_shed/tool_dependencies/install_util.py
+4
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@@ -83,6 +83,10 @@ def install_package( app, elem, tool_shed_repository, tool_dependencies=None ):
# print 'Installing tool dependencies via fabric script ', proprietary_fabfile_path
else:
print '\nSkipping installation of tool dependency', package_name, 'version', package_version, 'since it is installed in', install_dir, '\n'
tool_dependency = get_tool_dependency_by_name_version_type_repository( app, tool_shed_repository, package_name, package_version, 'package' )
tool_dependency.status = app.model.ToolDependency.installation_status.INSTALLED
sa_session.add( tool_dependency )
sa_session.flush()
return tool_dependency
def install_via_fabric( app, tool_dependency, actions_elem, install_dir, package_name=None, proprietary_fabfile_path=None, **kwd ):
"""Parse a tool_dependency.xml file's <actions> tag set to gather information for the installation via fabric."""