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Fix bugs

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This commit is contained in:
Leonid Kostrykin
2024-02-27 21:54:23 +01:00
parent 49fe197d8b
commit e034928e2f
4 changed files with 8 additions and 1 deletions
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lib/galaxy/tool_util/verify/__init__.py
+1 -1
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@@ -473,7 +473,7 @@ def get_image_metric(attributes):
"mae": lambda im1, im2: numpy.abs(im1 - im2).mean(),
"mse": lambda im1, im2: numpy.square((im1 - im2).astype(float)).mean(),
"rms": lambda im1, im2: math.sqrt(numpy.square((im1 - im2).astype(float)).mean()),
"fro": lambda im1, im2: numpy.linalg.norm(im1 - im2, "fro"),
"fro": lambda im1, im2: numpy.linalg.norm((im1 - im2).reshape(1, -1), "fro"),
"iou": lambda im1, im2: 1 - intersection_over_union(im1, im2),
}
try:
test-data/im3_a.png
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test-data/im3_b.tif
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test/functional/tools/image_diff.xml
+7
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@@ -9,6 +9,7 @@
<data name="out" format="data"/>
</outputs>
<tests>
<!-- test pair of equal images (but different formats) -->
<test>
<param name="in" value="im1_uint8.png" />
<output name="out" value="im1_uint8.png" compare="image_diff" metric="mae" />
@@ -21,9 +22,15 @@
<param name="in" value="im1_uint8.png" />
<output name="out" value="im1_uint8.png" compare="image_diff" metric="rms" eps="0" />
</test>
<!-- test pair of different images -->
<test>
<param name="in" value="im2_a.png" />
<output name="out" value="im2_b.png" compare="image_diff" metric="mae" eps="0.25" />
</test>
<!-- test RGB data -->
<test>
<param name="in" value="im3_a.png" />
<output name="out" value="im3_b.tif" compare="image_diff" metric="fro" eps="256" />
</test>
</tests>
</tool>