Updated builds.txt (and manual_builds.txt) to newest version, corresponding to that on main. Includes hg19 and phiX correction.

This commit is contained in:
Kelly Vincent
2010-05-06 12:11:47 -04:00
parent ae522e303e
commit dbfa0a7cca
2 changed files with 160 additions and 133 deletions
+159 -132
View File
@@ -1,133 +1,156 @@
#Harvested from http://genome-test.cse.ucsc.edu/cgi-bin/das/dsn
? unspecified (?)
hg18 Human Mar. 2006 (hg18)
hg17 Human May 2004 (hg17)
hg16 Human July 2003 (hg16)
hg15 Human Apr. 2003 (hg15)
hg13 Human Nov. 2002 (hg13)
venter1 J. Craig Venter Sep. 2007 (venter1)
panTro2 Chimp Mar. 2006 (panTro2)
panTro1 Chimp Nov. 2003 (panTro1)
ponAbe2 Orangutan July 2007 (ponAbe2)
rheMac2 Rhesus Jan. 2006 (rheMac2)
calJac1 Marmoset June 2007 (calJac1)
otoGar1 Bushbaby Dec. 2006 (otoGar1)
tupBel1 TreeShrew Dec. 2006 (tupBel1)
mm9 Mouse July 2007 (mm9)
mm8 Mouse Feb. 2006 (mm8)
mm7 Mouse Aug. 2005 (mm7)
mm6 Mouse Mar. 2005 (mm6)
mm5 Mouse May 2004 (mm5)
mm4 Mouse Oct. 2003 (mm4)
mm3 Mouse Feb. 2003 (mm3)
mm2 Mouse Feb. 2002 (mm2)
rn4 Rat Nov. 2004 (rn4)
rn3 Rat June 2003 (rn3)
rn2 Rat Jan. 2003 (rn2)
oryCun1 Rabbit May 2005 (oryCun1)
felCat3 Cat Mar. 2006 (felCat3)
canFam2 Dog May 2005 (canFam2)
canFam1 Dog July 2004 (canFam1)
equCab1 Horse Jan. 2007 (equCab1)
bosTau4 Cow Oct. 2007 (bosTau4)
bosTau3 Cow Aug. 2006 (bosTau3)
bosTau2 Cow Mar. 2005 (bosTau2)
bosTau1 Cow Sep. 2004 (bosTau1)
choHof1 Sloth Feb. 2008 (choHof1)
dasNov1 Armadillo May 2005 (dasNov1)
echTel1 Tenrec July 2005 (echTel1)
loxAfr1 Elephant May 2005 (loxAfr1)
monDom4 Opossum Jan. 2006 (monDom4)
monDom1 Opossum Oct. 2004 (monDom1)
ornAna1 Platypus Mar. 2007 (ornAna1)
galGal3 Chicken May 2006 (galGal3)
galGal2 Chicken Feb. 2004 (galGal2)
anoCar1 Lizard Feb. 2007 (anoCar1)
xenTro2 X. tropicalis Aug. 2005 (xenTro2)
xenTro1 X. tropicalis Oct. 2004 (xenTro1)
danRer5 Zebrafish July 2007 (danRer5)
danRer4 Zebrafish Mar. 2006 (danRer4)
danRer3 Zebrafish May 2005 (danRer3)
danRer2 Zebrafish June 2004 (danRer2)
danRer1 Zebrafish Nov. 2003 (danRer1)
tetNig1 Tetraodon Feb. 2004 (tetNig1)
fr2 Fugu Oct. 2004 (fr2)
fr1 Fugu Aug. 2002 (fr1)
gasAcu1 Stickleback Feb. 2006 (gasAcu1)
oryLat1 Medaka Apr. 2006 (oryLat1)
petMar1 Lamprey Mar. 2007 (petMar1)
borEut13 Boreoeutherian Apr. 24. 2006 (borEut13)
canHg12 Boreoeutherian Nov. 19. 2005 (canHg12)
rodEnt13 Rodent Apr. 24. 2006 (rodEnt13)
priMat13 Primate Apr. 24. 2006 (priMat13)
nonAfr13 Non-Afrotheria Apr. 24. 2006 (nonAfr13)
lauRas13 Laurasiatheria Apr. 24. 2006 (lauRas13)
homIni14 Hominidae Oct. 1. 2006 (homIni14)
homIni13 Hominidae Apr. 24. 2006 (homIni13)
gliRes13 Glires Apr. 24. 2006 (gliRes13)
eutHer13 Eutheria Apr. 24. 2006 (eutHer13)
euaGli13 Euarchontoglires Apr. 24. 2006 (euaGli13)
catArr1 Catarrhini June 13. 2006 (catArr1)
afrOth13 Afrotheria Apr. 24. 2006 (afrOth13)
braFlo1 Lancelet Mar. 2006 (braFlo1)
ci2 C. intestinalis Mar. 2005 (ci2)
ci1 C. intestinalis Dec. 2002 (ci1)
cioSav2 C. savignyi July 2005 (cioSav2)
cioSav1 C. savignyi Sept. 2001 (cioSav1)
strPur2 S. purpuratus Sep. 2006 (strPur2)
strPur1 S. purpuratus Apr. 2005 (strPur1)
ce4 C. elegans Jan. 2007 (ce4)
ce3 C. elegans March 2005 (ce3)
ce2 C. elegans Mar. 2004 (ce2)
ce1 C. elegans May 2003 (ce1)
caePb1 C. brenneri Jan. 2007 (caePb1)
cb3 C. briggsae Jan. 2007 (cb3)
cb2 C. briggsae Aug 2005 (cb2)
cb1 C. briggsae July 2002 (cb1)
caeRem2 C. remanei Mar. 2006 (caeRem2)
caeRem1 C. remanei March 2005 (caeRem1)
priPac1 P. pacificus Feb. 2007 (priPac1)
dm3 D. melanogaster Apr. 2006 (dm3)
dm2 D. melanogaster Apr. 2004 (dm2)
dm1 D. melanogaster Jan. 2003 (dm1)
droSim1 D. simulans Apr. 2005 (droSim1)
droSec1 D. sechellia Oct. 2005 (droSec1)
droYak2 D. yakuba Nov. 2005 (droYak2)
droYak1 D. yakuba Apr. 2004 (droYak1)
droEre1 D. erecta Aug. 2005 (droEre1)
droAna2 D. ananassae Aug. 2005 (droAna2)
droAna1 D. ananassae July 2004 (droAna1)
dp3 D. pseudoobscura Nov. 2004 (dp3)
dp2 D. pseudoobscura Aug. 2003 (dp2)
droPer1 D. persimilis Oct. 2005 (droPer1)
droVir2 D. virilis Aug. 2005 (droVir2)
droVir1 D. virilis July 2004 (droVir1)
droMoj2 D. mojavensis Aug. 2005 (droMoj2)
droMoj1 D. mojavensis Aug. 2004 (droMoj1)
droGri1 D. grimshawi Aug. 2005 (droGri1)
anoGam1 A. gambiae Feb. 2003 (anoGam1)
apiMel2 A. mellifera Jan. 2005 (apiMel2)
apiMel1 A. mellifera July 2004 (apiMel1)
triCas2 T. castaneum Sep. 2005 (triCas2)
falciparum P. falciparum Plasmodium falciparum (falciparum)
sacCer1 S. cerevisiae Oct. 2003 (sacCer1)
sc1 SARS coronavirus Apr. 2003 (sc1)
campJeju1 Campylobacter jejuni 02/25/2000 (campJeju1)
campJeju_RM1221_1 Campylobacter jejuni RM1221 01/07/2005 (campJeju_RM1221_1)
eschColi_CFT073_1 Escherichia coli CFT073 12/10/2002 (eschColi_CFT073_1)
eschColi_K12_1 Escherichia coli K12 09/05/1997 (eschColi_K12_1)
eschColi_O157H7_1 Escherichia coli O157H7 03/29/2000 (eschColi_O157H7_1)
eschColi_O157H7EDL933_1 Escherichia coli O157H7 EDL933 02/24/2001 (eschColi_O157H7EDL933_1)
vibrChol1 Vibrio cholerae O1 El Tor 08/22/2000 (vibrChol1)
vibrChol_MO10_1 Vibrio cholerae MO10 09/17/2005 (vibrChol_MO10_1)
vibrChol_O395_1 Vibrio cholerae O395 09/17/2005 (vibrChol_O395_1)
vibrFisc_ES114_1 Vibrio fischeri ES114 02/11/2005 (vibrFisc_ES114_1)
vibrPara1 Vibrio parahaemolyticus 06/02/2000 (vibrPara1)
vibrVuln_CMCP6_1 Vibrio vulnificus CMCP6 09/23/2003 (vibrVuln_CMCP6_1)
vibrVuln_YJ016_1 Vibrio vulnificus YJ016 12/06/2003 (vibrVuln_YJ016_1)
heliHepa1 Helicobacter hepaticus 06/18/2003 (heliHepa1)
heliPylo_26695_1 Helicobacter pylori 26695 08/07/1997 (heliPylo_26695_1)
heliPylo_J99_1 Helicobacter pylori J99 01/29/1999 (heliPylo_J99_1)
hg19Haps hg19Haplotypes Feb. 2009 (GRCh37/hg19Haps) (hg19Haps)
hg19 Human Feb. 2009 (GRCh37/hg19) (hg19)
hg18 Human Mar. 2006 (NCBI36/hg18) (hg18)
hg17 Human May 2004 (NCBI35/hg17) (hg17)
hg16 Human July 2003 (NCBI34/hg16) (hg16)
hg15 Human Apr. 2003 (NCBI33/hg15) (hg15)
venter1 J. Craig Venter Sep. 2007 (HuRef/venter1) (venter1)
panTro2 Chimp Mar. 2006 (CGSC 2.1/panTro2) (panTro2)
panTro1 Chimp Nov. 2003 (CGSC 1.1/panTro1) (panTro1)
gorGor2 Gorilla Aug. 2009 (Sanger 4/gorGor2) (gorGor2)
gorGor1 Gorilla Oct. 2008 (Sanger 0.1/gorGor1) (gorGor1)
ponAbe2 Orangutan July 2007 (WUGSC 2.0.2/ponAbe2) (ponAbe2)
rheMac2 Rhesus Jan. 2006 (MGSC Merged 1.0/rheMac2) (rheMac2)
papHam1 Baboon Nov. 2008 (Baylor 1.0/papHam1) (papHam1)
calJac3 Marmoset March 2009 (WUGSC 3.2/calJac3) (calJac3)
calJac1 Marmoset June 2007 (WUGSC 2.0.2/calJac1) (calJac1)
otoGar1 Bushbaby Dec. 2006 (Broad/otoGar1) (otoGar1)
micMur1 Mouse lemur Jun. 2003 (Broad/micMur1) (micMur1)
tupBel1 Tree shrew Dec. 2006 (Broad/tupBel1) (tupBel1)
mmtv MMTV Nov. 2009 (MMTV/mmtv) (mmtv)
homPan20 chimp/human Jun. 2008 (UCSC Recon/homPan20) (homPan20)
homIni20 orang/human Jun. 2008 (UCSC Recon/homIni20) (homIni20)
sorAra1 Shrew June 2006 (Broad/sorAra1) (sorAra1)
mm9 Mouse July 2007 (NCBI37/mm9) (mm9)
mm8 Mouse Feb. 2006 (NCBI36/mm8) (mm8)
mm7 Mouse Aug. 2005 (NCBI35/mm7) (mm7)
rn4 Rat Nov. 2004 (Baylor 3.4/rn4) (rn4)
rn3 Rat June 2003 (Baylor 3.1/rn3) (rn3)
speTri1 Squirrel Feb. 2008 (Broad/speTri1) (speTri1)
cavPor3 Guinea pig Feb. 2008 (Broad/cavPor3) (cavPor3)
oryCun2 Rabbit Apr. 2009 (Broad/oryCun2) (oryCun2)
oryCun1 Rabbit May 2005 (Broad/oryCun1) (oryCun1)
ochPri2 Pika Jul. 2008 (Broad/ochPri2) (ochPri2)
eriEur1 Hedgehog June 2006 (Broad/eriEur1) (eriEur1)
felCatV17e Cat Dec. 2008 (NHGRI/GTB V17e/felCatV17e) (felCatV17e)
felCat3 Cat Mar. 2006 (Broad/felCat3) (felCat3)
ailMel1 Panda Dec. 2009 (BGI-Shenzhen 1.0/ailMel1) (ailMel1)
nemVec1 Starlet sea anemone Jun. 2007 (JGI-PDF/nemVec1) (nemVec1)
canFam2 Dog May 2005 (Broad/canFam2) (canFam2)
canFam1 Dog July 2004 (Broad/canFam1) (canFam1)
canFamPoodle1 Dog May 2003 (TIGR Poodle/canFamPoodle1) (canFamPoodle1)
equCab2 Horse Sep. 2007 (Broad/equCab2) (equCab2)
equCab1 Horse Jan. 2007 (Broad/equCab1) (equCab1)
susScr2 Pig Nov. 2009 (SGSC Sscrofa9.2/susScr2) (susScr2)
pteVam1 Megabat Jul. 2008 (Broad/pteVam1) (pteVam1)
myoLuc1 Microbat Mar. 2006 (Broad/myoLuc1) (myoLuc1)
susScr1 Pig Apr. 2009 (SGSC 9.53/susScr1) (susScr1)
turTru1 Dolphin Feb. 2008 (Broad/turTru1) (turTru1)
tarSyr1 Tarsier Aug. 2008 (Broad/tarSyr1) (tarSyr1)
proCap1 Rock hyrax Jul. 2008 (Broad/proCap1) (proCap1)
oviAri1 Sheep Feb. 2010 (ISGC Ovis_aries_1.0/oviAri1) (oviAri1)
dipOrd1 Kangaroo rat Jul. 2008 (Broad/dipOrd1) (dipOrd1)
choHof1 Sloth Jul. 2008 (Broad/choHof1) (choHof1)
bosTau4 Cow Oct. 2007 (Baylor 4.0/bosTau4) (bosTau4)
bosTau3 Cow Aug. 2006 (Baylor 3.1/bosTau3) (bosTau3)
bosTau2 Cow Mar. 2005 (Baylor 2.0/bosTau2) (bosTau2)
macEug1 Wallaby Nov. 2007 (Baylor 1.0/macEug1) (macEug1)
dasNov2 Armadillo Jul. 2008 (Broad/dasNov2) (dasNov2)
dasNov1 Armadillo May 2005 (Broad/dasNov1) (dasNov1)
echTel1 Tenrec July 2005 (Broad/echTel1) (echTel1)
loxAfr3 Elephant Jul. 2009 (Broad/loxAfr3) (loxAfr3)
loxAfr2 Elephant Jul. 2008 (Broad/loxAfr2) (loxAfr2)
loxAfr1 Elephant May 2005 (Broad/loxAfr1) (loxAfr1)
monDom5 Opossum Oct. 2006 (Broad/monDom5) (monDom5)
monDom4 Opossum Jan. 2006 (Broad/monDom4) (monDom4)
monDom1 Opossum Oct. 2004 (Broad prelim/monDom1) (monDom1)
ornAna1 Platypus Mar. 2007 (WUGSC 5.0.1/ornAna1) (ornAna1)
galGal3 Chicken May 2006 (WUGSC 2.1/galGal3) (galGal3)
galGal2 Chicken Feb. 2004 (WUGSC 1.0/galGal2) (galGal2)
taeGut1 Zebra finch Jul. 2008 (WUGSC 3.2.4/taeGut1) (taeGut1)
anoCar1 Lizard Feb. 2007 (Broad/anoCar1) (anoCar1)
xenTro2 X. tropicalis Aug. 2005 (JGI 4.1/xenTro2) (xenTro2)
xenTro1 X. tropicalis Oct. 2004 (JGI 3.0/xenTro1) (xenTro1)
danRer6 Zebrafish Dec. 2008 (Zv8/danRer6) (danRer6)
danRer5 Zebrafish July 2007 (Zv7/danRer5) (danRer5)
danRer4 Zebrafish Mar. 2006 (Zv6/danRer4) (danRer4)
danRer3 Zebrafish May 2005 (Zv5/danRer3) (danRer3)
tetNig2 Tetraodon Mar. 2007 (Genoscope 8.0/tetNig2) (tetNig2)
tetNig1 Tetraodon Feb. 2004 (Genoscope 7/tetNig1) (tetNig1)
fr2 Fugu Oct. 2004 (JGI 4.0/fr2) (fr2)
fr1 Fugu Aug. 2002 (JGI 3.0/fr1) (fr1)
gasAcu1 Stickleback Feb. 2006 (Broad/gasAcu1) (gasAcu1)
oryLat2 Medaka Oct. 2005 (NIG/UT MEDAKA1/oryLat2) (oryLat2)
oryLat1 Medaka Apr. 2006 (NIG/UT MEDAKA1/oryLat1) (oryLat1)
petMar1 Lamprey Mar. 2007 (WUGSC 3.0/petMar1) (petMar1)
borEut13 Boreoeutherian Apr. 24. 2006 (UCSC Recon/borEut13) (borEut13)
canHg12 Boreoeutherian Nov. 19. 2005 (UCSC Recon/canHg12) (canHg12)
rodEnt13 Rodent Apr. 24. 2006 (UCSC Recon/rodEnt13) (rodEnt13)
priMat13 Primate Apr. 24. 2006 (UCSC Recon/priMat13) (priMat13)
nonAfr13 Non-Afrotheria Apr. 24. 2006 (UCSC Recon/nonAfr13) (nonAfr13)
lauRas13 Laurasiatheria Apr. 24. 2006 (UCSC Recon/lauRas13) (lauRas13)
homIni14 Hominidae Oct. 1. 2006 (UCSC Recon/homIni14) (homIni14)
homIni13 Hominidae Apr. 24. 2006 (UCSC Recon/homIni13) (homIni13)
gliRes13 Glires Apr. 24. 2006 (UCSC Recon/gliRes13) (gliRes13)
eutHer13 Eutheria Apr. 24. 2006 (UCSC Recon/eutHer13) (eutHer13)
euaGli13 Euarchontoglires Apr. 24. 2006 (UCSC Recon/euaGli13) (euaGli13)
catArr1 Catarrhini June 13. 2006 (UCSC Recon/catArr1) (catArr1)
afrOth13 Afrotheria Apr. 24. 2006 (UCSC Recon/afrOth13) (afrOth13)
braFlo1 Lancelet Mar. 2006 (JGI 1.0/braFlo1) (braFlo1)
ci2 C. intestinalis Mar. 2005 (JGI 2.1/ci2) (ci2)
ci1 C. intestinalis Dec. 2002 (JGI 1.0/ci1) (ci1)
cioSav2 C. savignyi July 2005 (Sidow Lab 2.0/cioSav2) (cioSav2)
cioSav1 C. savignyi Apr. 2003 (Broad/cioSav1) (cioSav1)
strPur2 S. purpuratus Sep. 2006 (Baylor 2.1/strPur2) (strPur2)
strPur1 S. purpuratus Apr. 2005 (Baylor 1.1/strPur1) (strPur1)
ce8 C. elegans Jun 2009 (WS204/ce8) (ce8)
ce7 C. elegans Feb 2009 (WS200/ce7) (ce7)
aplCal1 Sea hare Sept. 2008 (Broad 2.0/aplCal1) (aplCal1)
ce6 C. elegans May 2008 (WS190/ce6) (ce6)
ce5 C. elegans Aug. 2007 (WS180/ce5) (ce5)
ce4 C. elegans Jan. 2007 (WS170/ce4) (ce4)
ce3 C. elegans March 2005 (WS140/ce3) (ce3)
ce2 C. elegans Mar. 2004 (WS120/ce2) (ce2)
caePb2 C. brenneri Feb. 2008 (WUGSC 6.0.1/caePb2) (caePb2)
caePb1 C. brenneri Jan. 2007 (WUGSC 4.0/caePb1) (caePb1)
cb3 C. briggsae Jan. 2007 (WUGSC 1.0/cb3) (cb3)
cb2 C. briggsae Aug 2005 (WUGSC prelim/cb2) (cb2)
cb1 C. briggsae July 2002 (WormBase cb25.agp8/cb1) (cb1)
caeRem3 C. remanei May 2007 (WUGSC 15.0.1/caeRem3) (caeRem3)
caeRem2 C. remanei Mar. 2006 (WUGSC 1.0/caeRem2) (caeRem2)
caeRem1 C. remanei March 2005 (WUGSC prelim/caeRem1) (caeRem1)
caeJap2 C. japonica Jan. 2009 (WUGSC 4.0.1/caeJap2) (caeJap2)
caeJap1 C. japonica Mar. 2008 (WUGSC 3.0.2/caeJap1) (caeJap1)
priPac1 P. pacificus Feb. 2007 (WUGSC 5.0/priPac1) (priPac1)
dm3 D. melanogaster Apr. 2006 (BDGP R5/dm3) (dm3)
dm2 D. melanogaster Apr. 2004 (BDGP R4/dm2) (dm2)
dm1 D. melanogaster Jan. 2003 (BDGP R3/dm1) (dm1)
droSim1 D. simulans Apr. 2005 (WUGSC mosaic 1.0/droSim1) (droSim1)
droSec1 D. sechellia Oct. 2005 (Broad/droSec1) (droSec1)
droYak2 D. yakuba Nov. 2005 (WUGSC 7.1/droYak2) (droYak2)
droYak1 D. yakuba Apr. 2004 (WUGSC 1.0/droYak1) (droYak1)
droEre1 D. erecta Aug. 2005 (Agencourt prelim/droEre1) (droEre1)
droAna2 D. ananassae Aug. 2005 (Agencourt prelim/droAna2) (droAna2)
droAna1 D. ananassae July 2004 (TIGR/droAna1) (droAna1)
dp3 D. pseudoobscura Nov. 2004 (FlyBase 1.03/dp3) (dp3)
dp2 D. pseudoobscura Aug. 2003 (Baylor freeze1/dp2) (dp2)
droPer1 D. persimilis Oct. 2005 (Broad/droPer1) (droPer1)
droVir2 D. virilis Aug. 2005 (Agencourt prelim/droVir2) (droVir2)
droVir1 D. virilis July 2004 (Agencourt prelim/droVir1) (droVir1)
droMoj2 D. mojavensis Aug. 2005 (Agencourt prelim/droMoj2) (droMoj2)
droMoj1 D. mojavensis Aug. 2004 (Agencourt prelim/droMoj1) (droMoj1)
droGri1 D. grimshawi Aug. 2005 (Agencourt prelim/droGri1) (droGri1)
anoGam1 A. gambiae Feb. 2003 (IAGEC MOZ2/anoGam1) (anoGam1)
apiMel2 A. mellifera Jan. 2005 (Baylor 2.0/apiMel2) (apiMel2)
apiMel1 A. mellifera July 2004 (Baylor 1.2/apiMel1) (apiMel1)
triCas2 T. castaneum Sep. 2005 (Baylor 2.0/triCas2) (triCas2)
falciparum P. falciparum Plasmodium falciparum (?/falciparum) (falciparum)
sacCer2 S. cerevisiae June 2008 (SGD/sacCer2) (sacCer2)
sacCer1 S. cerevisiae Oct. 2003 (SGD/sacCer1) (sacCer1)
sc1 SARS coronavirus Apr. 2003 (GenBank Apr. 14 '03/sc1) (sc1)
phiX phiX174 (phiX)
16079 Mycobacterium sp. JLS (16079)
symbTher_IAM14863 Symbiobacterium thermophilum IAM 14863 (symbTher_IAM14863)
16070 Yersinia pseudotuberculosis IP 31758 (16070)
@@ -356,6 +379,7 @@ carbHydr_Z_2901 Carboxydothermus hydrogenoformans Z-2901 (carbHydr_Z_2901)
16062 Leuconostoc citreum KM20 (16062)
16148 Leptospira borgpetersenii serovar Hardjo-bovis JB197 (16148)
16146 Leptospira borgpetersenii serovar Hardjo-bovis L550 (16146)
vibrVuln_CMCP6_1 Vibrio vulnificus CMCP6 (vibrVuln_CMCP6_1)
10877 Bacillus thuringiensis serovar konkukian str. 97-27 (10877)
19517 Clostridium botulinum A str. ATCC 19397 (19517)
nitrWino_NB_255 Nitrobacter winogradskyi Nb-255 (nitrWino_NB_255)
@@ -500,6 +524,7 @@ saliRube_DSM13855 Salinibacter ruber DSM 13855 (saliRube_DSM13855)
28507 Clostridium botulinum A3 str. Loch Maree (28507)
colwPsyc_34H Colwellia psychrerythraea 34H (colwPsyc_34H)
hyphNept_ATCC15444 Hyphomonas neptunium ATCC 15444 (hyphNept_ATCC15444)
vibrChol1 Vibrio cholerae O1 biovar eltor str. N16961 (vibrChol1)
deinGeot_DSM11300 Deinococcus geothermalis DSM 11300 (deinGeot_DSM11300)
312 Buchnera aphidicola str. Sg (Schizaphis graminum) (312)
311 Streptococcus pyogenes MGAS315 (311)
@@ -536,6 +561,7 @@ nitrEuro Nitrosomonas europaea ATCC 19718 (nitrEuro)
12720 Enterobacter sakazakii ATCC BAA-894 (12720)
therMari Thermotoga maritima MSB8 (therMari)
mycoGeni Mycoplasma genitalium G37 (mycoGeni)
vibrFisc_ES114_1 Vibrio fischeri ES114 (vibrFisc_ES114_1)
pyroIsla1 Pyrobaculum islandicum DSM 4184 (pyroIsla1)
17407 Burkholderia multivorans ATCC 17616 (17407)
13030 Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- (13030)
@@ -544,6 +570,7 @@ pyroIsla1 Pyrobaculum islandicum DSM 4184 (pyroIsla1)
19857 Vibrio harveyi ATCC BAA-1116 (19857)
17639 Parvibaculum lavamentivorans DS-1 (17639)
18059 Mycobacterium bovis BCG str. Pasteur 1173P2 (18059)
vibrPara1 Vibrio parahaemolyticus RIMD 2210633 (vibrPara1)
259 Escherichia coli O157:H7 EDL933 (259)
64 Staphylococcus epidermidis RP62A (64)
neisGono_FA1090_1 Neisseria gonorrhoeae FA 1090 (neisGono_FA1090_1)
@@ -598,6 +625,7 @@ halMar1 Haloarcula marismortui ATCC 43049 (halMar1)
vermEise_EF01_2 Verminephrobacter eiseniae EF01-2 (vermEise_EF01_2)
granBeth_CGDNIH1 Granulibacter bethesdensis CGDNIH1 (granBeth_CGDNIH1)
alcaBork_SK2 Alcanivorax borkumensis SK2 (alcaBork_SK2)
vibrChol_O395_1 Vibrio cholerae O395 (vibrChol_O395_1)
nitrOcea_ATCC19707 Nitrosococcus oceani ATCC 19707 (nitrOcea_ATCC19707)
campJeju_RM1221 Campylobacter jejuni RM1221 (campJeju_RM1221)
12468 Bacillus cereus E33L (12468)
@@ -723,6 +751,7 @@ methCaps_BATH Methylococcus capsulatus str. Bath (methCaps_BATH)
12637 Clostridium beijerinckii NCIMB 8052 (12637)
ehrlRumi_WELGEVONDEN Ehrlichia ruminantium str. Welgevonden (ehrlRumi_WELGEVONDEN)
methLabrZ_1 Methanocorpusculum labreanum Z (methLabrZ_1)
vibrVuln_YJ016_1 Vibrio vulnificus YJ016 (vibrVuln_YJ016_1)
13773 Streptococcus thermophilus LMD-9 (13773)
20039 Leptothrix cholodnii SP-6 (20039)
shewAmaz Shewanella amazonensis SB2B (shewAmaz)
@@ -786,7 +815,5 @@ eschColi_K12 Escherichia coli K12 (eschColi_K12)
aeroHydr_ATCC7966 Aeromonas hydrophila subsp. hydrophila ATCC 7966 (aeroHydr_ATCC7966)
baciAnth_AMES Bacillus anthracis str. Ames (baciAnth_AMES)
shewOnei Shewanella oneidensis MR-1 (shewOnei)
equCab2 Horse Sep. 2007 (equCab2)
arabidopsis Arabidopsis thaliana TAIR9
arabidopsis_tair8 Arabidopsis thaliana TAIR8
araTha1 Arabidopsis thaliana TAIR7
15217 Human herpesvirus 1 (15217)
lMaj5 Leishmania major 2005 (lMaj5)
+1 -1
View File
@@ -1,4 +1,4 @@
phix phiX174 phix=5386
phiX phiX174 phiX=5386
16079 Mycobacterium sp. JLS NC_009077=6048425
symbTher_IAM14863 Symbiobacterium thermophilum IAM 14863 chr=3566135
16070 Yersinia pseudotuberculosis IP 31758 NC_009708=4723306,NC_009705=153140,NC_009704=58679