Merge pull request #8120 from VJalili/update_cloudauthz_version

Update cloudauthz to its latest version
This commit is contained in:
John Chilton
2019-06-09 20:59:04 -04:00
committed by GitHub
4 changed files with 55 additions and 48 deletions
@@ -32,7 +32,7 @@ numpy = "*"
bx-python = "*"
MarkupSafe = "*"
PyYAML = "*"
SQLAlchemy = "*"
SQLAlchemy = "<1.3"
SQLAlchemy-Utils = "*"
Mercurial = {version = "<=3.7.3", markers = "python_version < '3'"}
nodeenv = "*"
@@ -75,7 +75,7 @@ pyparsing = "*"
"Fabric3" = "*"
paramiko = "*"
python-genomespaceclient = "<2.0"
social_auth_core = {version = "==3.1.0", extras = ['openidconnect']}
social_auth_core = {version = "==3.1.0+gx0", extras = ['openidconnect']}
cloudauthz = "<=0.2.0"
gxformat2 = "*"
@@ -4,45 +4,47 @@ alabaster==0.7.12
argh==0.26.2
atomicwrites==1.3.0
attrs==19.1.0
babel==2.6.0
babel==2.7.0
certifi==2019.3.9
chardet==3.0.4
commonmark==0.8.1
commonmark==0.9.0
configparser==3.7.4 ; python_version < '3.2'
contextlib2==0.5.5 ; python_version < '3.5'
docutils==0.14
funcsigs==1.0.2 ; python_version < '3.3'
future==0.17.1
gunicorn==19.9.0
idna==2.8
imagesize==1.1.0
importlib-metadata==0.17
jinja2==2.10.1
lxml==4.3.3
markdown==2.6.11
markupsafe==1.1.1
mirakuru==1.1.0
mock==2.0.0
mock==3.0.5
more-itertools==5.0.0
nose==1.3.7
nosehtml==0.4.5
packaging==19.0
pathlib2==2.3.2 ; python_version < '3'
pathtools==0.1.2
pbr==5.1.3
pluggy==0.9.0
pluggy==0.12.0
port-for==0.4
psutil==5.6.1
psutil==5.6.2
py==1.8.0
pygithub3==0.5.1 ; python_version < '3'
pygments==2.3.1
pygments==2.4.2
pyparsing==2.4.0
pytest-html==1.20.0
pytest-metadata==1.8.0
pytest-postgresql==1.4.0
pytest-postgresql==1.4.1
pytest-pythonpath==0.7.3
pytest==4.4.1
pytest==4.6.2
pytz==2019.1
pyyaml==5.1
pyyaml==5.1.1
recommonmark==0.5.0
requests==2.21.0
requests==2.22.0
scandir==1.10.0 ; python_version < '3.5'
selenium==3.141.0
six==1.11.0
@@ -50,9 +52,11 @@ snowballstemmer==1.2.1
sphinx-markdown-tables==0.0.9
sphinx-rtd-theme==0.4.3
sphinx==1.8.5
sphinxcontrib-websupport==1.1.0
testfixtures==6.7.0
sphinxcontrib-websupport==1.1.2
testfixtures==6.8.2
twill==0.9.1 ; python_version < '3'
typing==3.6.6 ; python_version < '3.5'
urllib3==1.24.2 ; python_version == '2.7'
urllib3==1.25.3 ; python_version == '2.7'
watchdog==0.9.0
wcwidth==0.1.7 ; sys_platform != 'win32'
zipp==0.5.1
@@ -1,9 +1,10 @@
-i https://wheels.galaxyproject.org/simple
--extra-index-url https://pypi.python.org/simple
adal==1.2.1
amqp==2.4.2
amqp==2.5.0
appdirs==1.4.3
asn1crypto==0.24.0
attrs==19.1.0
avro==1.8.1 ; python_version < '3'
azure-common==1.1.14
azure-cosmosdb-nspkg==2.0.2
@@ -16,9 +17,9 @@ azure-mgmt-resource==2.0.0
azure-mgmt-storage==2.0.0
azure-nspkg==3.0.2
azure-storage-blob==1.3.1
azure-storage-common==1.4.0
azure-storage-common==1.4.2
azure-storage-nspkg==3.1.0
babel==2.6.0
babel==2.7.0
bagit==1.6.4
bcrypt==3.1.6
bdbag==1.4.1
@@ -28,21 +29,21 @@ bleach==3.1.0
boltons==19.1.0
boto3==1.9.114
boto==2.49.0
botocore==1.12.133
botocore==1.12.164
bx-python==0.8.2
bz2file==0.98 ; python_version < '3.3'
cachecontrol==0.11.7
cachetools==3.1.0
cachetools==3.1.1
certifi==2019.3.9
cffi==1.12.3
chardet==3.0.4
cheetah3==3.2.2
cheetah3==3.2.3
cliff==2.14.1
cloudauthz==0.2.0
cloudbridge==2.0.0
cmd2==0.8.9
contextlib2==0.5.5 ; python_version < '3.5'
cryptography==2.6.1
cryptography==2.7
cwltool==1.0.20180721142728
debtcollector==1.21.0
decorator==4.4.0
@@ -65,7 +66,7 @@ google-auth-httplib2==0.0.3
google-auth==1.6.3
gxformat2==0.8.3
h5py==2.9.0
httplib2==0.12.1
httplib2==0.13.0
idna==2.8
ipaddress==1.0.22 ; python_version < '3.3'
isa-rwval==0.10.7
@@ -74,12 +75,12 @@ isodate==0.6.0
jmespath==0.9.4
jsonpatch==1.23
jsonpointer==2.0
jsonschema==2.6.0
jsonschema==3.0.1
keystoneauth1==3.14.0
kombu==4.5.0
kombu==4.6.1
lockfile==0.12.2
lxml==4.3.3
mako==1.0.9
mako==1.0.12
markupsafe==1.1.1
mercurial==3.7.3 ; python_version < '3'
mistune==0.8.4
@@ -94,19 +95,19 @@ netifaces==0.10.9
networkx==1.11
nodeenv==1.3.3
nose==1.3.7
numpy==1.16.2
numpy==1.16.4
oauth2client==4.1.3
oauthlib==3.0.1
openstacksdk==0.17.0
os-client-config==1.32.0
os-service-types==1.6.0
os-service-types==1.7.0
osc-lib==1.12.1
oslo.config==6.8.1
oslo.config==6.9.0
oslo.context==2.22.1
oslo.i18n==3.23.1
oslo.log==3.42.3
oslo.serialization==2.28.2
oslo.utils==3.40.3
oslo.log==3.44.0
oslo.serialization==2.29.1
oslo.utils==3.41.0
packaging==19.0
paramiko==2.4.2
parsley==1.3
@@ -114,15 +115,15 @@ paste==3.0.8
pastedeploy==2.0.1
pastescript==3.1.0
pathlib2==2.3.2 ; python_version < '3'
pbr==5.1.3
pbr==5.2.1
prettytable==0.7.2
prov==1.5.1
psutil==5.6.1
pulsar-galaxy-lib==0.11.0
pyasn1-modules==0.2.4
psutil==5.6.2
pulsar-galaxy-lib==0.12.1
pyasn1-modules==0.2.5
pyasn1==0.4.5
pycparser==2.19
pycryptodome==3.8.1
pycryptodome==3.8.2
pyeventsystem==0.1.0
pyinotify==0.9.6 ; sys_platform != 'win32' and sys_platform != 'darwin' and sys_platform != 'sunos5'
pyjwt==1.7.1
@@ -131,6 +132,7 @@ pynacl==1.3.0
pyopenssl==19.0.0
pyparsing==2.4.0
pyperclip==1.7.0
pyrsistent==0.15.2
pysam==0.15.2
pysftp==0.2.9
python-cinderclient==4.0.0
@@ -144,20 +146,20 @@ python-novaclient==11.0.0
python-openid==2.2.5 ; python_version < '3.0'
python-swiftclient==3.6.0
pytz==2019.1
pyyaml==5.1
pyyaml==5.1.1
rdflib-jsonld==0.4.0
rdflib==4.2.2
repoze.lru==0.7
requests-oauthlib==1.2.0
requests-toolbelt==0.9.1
requests==2.21.0
requests==2.22.0
requestsexceptions==1.4.0
rfc3986==1.2.0
rfc3986==1.3.2
routes==2.4.1
rsa==4.0
ruamel.ordereddict==0.4.13 ; platform_python_implementation == 'CPython' and python_version <= '2.7'
ruamel.yaml==0.15.92
s3transfer==0.2.0
ruamel.yaml==0.15.97
s3transfer==0.2.1
scandir==1.10.0 ; python_version < '3.5'
schema-salad==2.7.20181126142424
shellescape==3.4.1
@@ -165,11 +167,11 @@ simplejson==3.16.0
six==1.11.0
social-auth-core[openidconnect]==3.1.0+gx0
sqlalchemy-migrate==0.12.0
sqlalchemy-utils==0.33.11
sqlalchemy==1.2.18
sqlalchemy-utils==0.34.0
sqlalchemy==1.2.19
sqlparse==0.3.0
stevedore==1.30.1
subprocess32==3.5.3 ; python_version < '3.0'
subprocess32==3.5.4 ; python_version < '3.0'
svgwrite==1.2.1
tempita==0.5.2
tenacity==4.12.0
@@ -178,10 +180,10 @@ typing==3.6.6 ; python_version < '3.5'
tzlocal==1.5.1
unicodecsv==0.14.1 ; python_version < '3.0'
uritemplate==3.0.0
urllib3==1.24.2 ; python_version == '2.7'
urllib3==1.25.3 ; python_version == '2.7'
uwsgi==2.0.18
vine==1.3.0
warlock==1.3.0
warlock==1.3.3
wcwidth==0.1.7 ; sys_platform != 'win32'
webencodings==0.5.1
webob==1.8.5
@@ -65,6 +65,7 @@ for env in $ENVS; do
-e "s/^futures==\([^ ;]\{1,\}\).*$/futures==\1 ; python_version == '2.6' or python_version == '2.7'/" \
-e "s/^monotonic==\([^ ;]\{1,\}\).*$/monotonic==\1/" \
-e "s/^more-itertools==\([^ ;]\{1,\}\).*$/more-itertools==\1/" \
-e "s/^paste==\([^ ;]\{1,\}\).*$/paste==\1/" \
-e "s/^py2-ipaddress==\([^ ;]\{1,\}\).*$/py2-ipaddress==\1 ; python_version < '3'/" \
-e "s/^pyinotify==\([^ ;]\{1,\}\).*$/pyinotify==\1 ; sys_platform != 'win32' and sys_platform != 'darwin' and sys_platform != 'sunos5'/" \
-e "s/^python-dateutil==\([^ ;]\{1,\}\).*$/python-dateutil==\1/" \