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Update debian init script

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to include instructions for starting galaxy >= 16.01.
This commit is contained in:
Marius van den Beek
2016-04-08 16:55:45 +02:00
parent 4138860bfd
commit d6a7acab99
1 changed files with 7 additions and 3 deletions
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contrib/galaxy.debian-init
+7 -3
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@@ -15,8 +15,12 @@
USER="galaxy"
GROUP="nogroup"
DIR="/home/galaxy/galaxy_dist/"
PYTHON="/usr/bin/python"
GALAXY_DIR="/home/galaxy/galaxy_dist/"
# Galaxy releases >= 16.01 installs dependencies by default into a virtualenv in <GALAXY_DIR>/.venv
# A simple way to activate this virtualenv is to use the python interpreter in <GALAXY_DIR>/.venv
# See https://wiki.galaxyproject.org/News/2016_01_GalaxyRelease and
# https://github.com/galaxyproject/galaxy/blob/dev/doc/source/admin/framework_dependencies.rst
PYTHON="/home/galaxy/galaxy_dist/.venv/bin/python"
OPTS="./scripts/paster.py serve --log-file /home/galaxy/galaxy.log config/galaxy.ini"
PIDFILE="/var/run/galaxy.pid"
@@ -24,7 +28,7 @@ case "${1:-''}" in
'start')
log_daemon_msg "Starting Galaxy"
if start-stop-daemon --chuid $USER --group $GROUP --start --make-pidfile \
--pidfile $PIDFILE --background --chdir $DIR --exec $PYTHON -- $OPTS; then
--pidfile $PIDFILE --background --chdir $GALAXY_DIR --exec $PYTHON -- $OPTS; then
log_end_msg 0
else
log_end_msg 1