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Extend tests for new invocation failure messages
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@@ -4060,6 +4060,78 @@ outputs:
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assert "workflow_step_id" in message
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assert message["output_name"] == "does_not_exist"
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@skip_without_tool("__APPLY_RULES__")
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@skip_without_tool("job_properties")
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def test_workflow_failed_input_not_ok(self, history_id):
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summary = self._run_workflow(
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"""
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class: GalaxyWorkflow
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steps:
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job_props:
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tool_id: job_properties
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state:
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thebool: true
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failbool: true
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apply:
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tool_id: __APPLY_RULES__
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in:
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input: job_props/list_output
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state:
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rules:
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rules:
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- type: add_column_metadata
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value: identifier0
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mapping:
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- type: list_identifiers
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columns: [0]
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""",
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history_id=history_id,
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assert_ok=False,
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wait=True,
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)
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invocation_details = self.workflow_populator.get_invocation(summary.invocation_id, step_details=True)
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assert invocation_details["state"] == "failed"
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assert len(invocation_details["messages"]) == 1
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message = invocation_details["messages"][0]
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assert message["reason"] == "dataset_failed"
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assert message["workflow_step_id"] == 1
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@skip_without_tool("__RELABEL_FROM_FILE__")
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def test_workflow_failed_with_message_exception(self, history_id):
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summary = self._run_workflow(
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"""
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class: GalaxyWorkflow
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inputs:
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input_collection:
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collection_type: list
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type: collection
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relabel_file:
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type: data
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steps:
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relabel:
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tool_id: __RELABEL_FROM_FILE__
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in:
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input: input_collection
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how|labels: relabel_file
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test_data:
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input_collection:
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collection_type: "list:list"
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relabel_file:
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value: 1.bed
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type: File
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""",
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history_id=history_id,
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assert_ok=False,
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wait=True,
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)
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invocation_details = self.workflow_populator.get_invocation(summary.invocation_id, step_details=True)
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assert invocation_details["state"] == "failed"
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assert len(invocation_details["messages"]) == 1
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message = invocation_details["messages"][0]
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assert message["reason"] == "unexpected_failure"
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assert message["workflow_step_id"] == 2
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assert "Invalid new collection identifier" in message["details"]
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@skip_without_tool("identifier_multiple")
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def test_invocation_map_over(self, history_id):
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summary = self._run_workflow(
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