Upgraded genomespaceclient to newer version

This fixes issue reported in: https://github.com/galaxyproject/usegalaxy-playbook/issues/100
Also related to PR: https://github.com/galaxyproject/galaxy/pull/6660
This commit is contained in:
Nuwan Goonasekera
2018-09-05 02:39:02 +05:30
parent bc1526ab2d
commit c867c6863f
3 changed files with 3 additions and 3 deletions
@@ -69,7 +69,7 @@ svgwrite = "*"
pyparsing = "*"
"Fabric3" = "*"
paramiko = "*"
python-genomespaceclient = "<1.0"
python-genomespaceclient = "<2.0"
social_auth_core = {version = "==1.5.0", extras = ['openidconnect']}
[requires]
@@ -93,7 +93,7 @@ pyperclip==1.6.4
pysam==0.14.1
python-cinderclient==2.0.1
python-dateutil==2.7.3
python-genomespaceclient==0.2
python-genomespaceclient==1.0.0
python-glanceclient==2.6.0; python_version != '3.3.*'
python-keystoneclient==3.10.0; python_version != '3.3.*'
python-lzo==1.12
+1 -1
View File
@@ -148,7 +148,7 @@ def determine_file_type(input_url, output_filename, metadata, json_params, sniff
Determine the Galaxy data format for this file.
"""
# Use genomespace metadata to map type
file_format = metadata.dataFormat.name if metadata.dataFormat else None
file_format = metadata.data_format.name if metadata.data_format else None
file_type = get_galaxy_ext_from_genomespace_format(file_format)
# If genomespace metadata has no identifiable format, attempt to sniff type