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Change default settings, avoid flickering on startup

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guerler
2017-02-15 11:44:04 -05:00
parent 48639028df
commit c390da3cbd
6 changed files with 60 additions and 1651 deletions
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config/plugins/visualizations/charts/static/repository/build/ngl_viewer.js
+30 -521
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config/plugins/visualizations/charts/static/repository/build/ngl_viewer.js.map
+1 -1
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config/plugins/visualizations/charts/static/repository/build/registry.js
+1 -1105
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config/plugins/visualizations/charts/static/repository/build/registry.js.map
+1 -1
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config/plugins/visualizations/charts/static/repository/visualizations/ngl/viewer/config.js
+18 -18
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@@ -45,6 +45,24 @@ define( [], function() {
{ label : 'Unitcell', value : 'unitcell' } ]
}
},
radius: {
name : 'radius',
label : 'Radius',
help : 'Select a number providing a fixed radius used for rendering the representation.',
type : 'float',
min : 0.001,
max : 10.0,
value : 0.05
},
scale: {
name : 'scale',
label : 'Scale',
help : 'Select a number that scales the value defined by the *radius* parameter.',
type : 'float',
min : 0.001,
max : 10.0,
value : 0.7
},
colorscheme : {
label : 'Color Scheme',
help : 'Select color scheme of the molecule scene.',
@@ -88,24 +106,6 @@ define( [], function() {
value : false,
data : [ { label : 'On', value : true }, { label : 'Off', value : false } ]
},
radius: {
name : 'radius',
label : 'Radius',
help : 'Select a number providing a fixed radius used for rendering the representation.',
type : 'float',
min : 0.001,
max : 10.0,
value : 0.7
},
scale: {
name : 'scale',
label : 'Scale',
help : 'Select a number that scales the value defined by the *radius* parameter.',
type : 'float',
min : 0.001,
max : 10.0,
value : 0.7
},
assembly : {
label : 'Assembly',
help : 'Select a name of an assembly object.',
config/plugins/visualizations/charts/static/repository/visualizations/ngl/viewer/wrapper.js
+9 -5
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@@ -21,12 +21,16 @@ define( [ 'utilities/utils', "plugins/ngl/viewer" ], function( Utils, ngl ) {
opacity: settings.get( 'opacity' )
};
stage_parameters = { ext: dataset.extension, name: dataset.name, defaultRepresentation: true };
stage.loadFile( dataset.download_url, stage_parameters ).then( function( component ) {
component.addRepresentation( viewer_options.mode, representation_parameters );
component.centerView();
options.chart.state( 'ok', 'Chart drawn.' );
try {
stage.loadFile( dataset.download_url, stage_parameters ).then( function( component ) {
component.addRepresentation( viewer_options.mode, representation_parameters );
options.chart.state( 'ok', 'Chart drawn.' );
options.process.resolve();
} );
} catch( e ) {
options.chart.state( 'failed', 'Could not load PDB file.' );
options.process.resolve();
} );
}
stage.setQuality( settings.get( 'quality' ) );
if( settings.get( 'spin' ) === true || settings.get( 'spin' ) === 'true' ) {
stage.setSpin( [ 0, 1, 0 ], 0.01 );