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Merge pull request #17929 from mvdbeek/rename_pja_fix

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[24.0] Fix workflow run form for workflows with null rename PJA
This commit is contained in:
Marius van den Beek
2024-04-08 12:43:24 +02:00
committed by GitHub
parent 249681de20 29e9cc3276
commit c2f45dd560
1 changed files with 5 additions and 4 deletions
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lib/galaxy/workflow/modules.py
+5 -4
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@@ -2381,13 +2381,14 @@ class ToolModule(WorkflowModule):
action_arguments = None
return PostJobAction(value["action_type"], step, output_name, action_arguments)
def get_informal_replacement_parameters(self, step) -> List[str]:
def get_informal_replacement_parameters(self, step: WorkflowStep) -> List[str]:
"""Return a list of replacement parameters."""
replacement_parameters = set()
for pja in step.post_job_actions:
for argument in pja.action_arguments.values():
for match in re.findall(r"\$\{(.+?)\}", unicodify(argument)):
replacement_parameters.add(match)
if action_arguments := pja.action_arguments:
for argument in action_arguments.values():
for match in re.findall(r"\$\{(.+?)\}", unicodify(argument)):
replacement_parameters.add(match)
return list(replacement_parameters)