opensource/galaxy
3
0
Fork 0
mirror of https://github.com/galaxyproject/galaxy.git synced 2026-09-24 16:30:27 +08:00
Code Issues Packages Projects Releases Wiki Activity

Upgrade 'uv' setup action to version 7 across all workflow files

Browse Source
This commit is contained in:
Arash
2025-10-29 12:45:45 +00:00
committed by Nicola Soranzo
parent f1917686a7
commit bb7d2e9e60
27 changed files with 27 additions and 27 deletions
Download Patch File Download Diff File Expand all files Collapse all files
.github/workflows/api.yaml
+1 -1
View File
@@ -55,7 +55,7 @@ jobs:
with:
python-version: ${{ matrix.python-version }}
- name: Install uv
uses: astral-sh/setup-uv@v6
uses: astral-sh/setup-uv@v7
- name: Get full Python version
id: full-python-version
shell: bash
.github/workflows/bioblend.yaml
+1 -1
View File
@@ -54,7 +54,7 @@ jobs:
with:
python-version: ${{ steps.get_bioblend_python_version.outputs.bioblend_python_version }}
- name: Install uv
uses: astral-sh/setup-uv@v6
uses: astral-sh/setup-uv@v7
- name: Install tox
run: uv tool install tox --with tox-uv
- name: Set up Python for Galaxy
.github/workflows/check_test_class_names.yaml
+1 -1
View File
@@ -23,7 +23,7 @@ jobs:
with:
python-version: ${{ matrix.python-version }}
- name: Install uv
uses: astral-sh/setup-uv@v6
uses: astral-sh/setup-uv@v7
- name: Install Python dependencies
run: uv pip install --system -r requirements.txt -r lib/galaxy/dependencies/pinned-test-requirements.txt
- name: Run tests
.github/workflows/converter_tests.yaml
+1 -1
View File
@@ -44,7 +44,7 @@ jobs:
with:
python-version: ${{ matrix.python-version }}
- name: Install uv
uses: astral-sh/setup-uv@v6
uses: astral-sh/setup-uv@v7
- name: Move test data
run: rsync -av --remove-source-files --exclude .git galaxy-test-data/ 'galaxy root/test-data/'
- name: Install planemo
.github/workflows/cwl_conformance.yaml
+1 -1
View File
@@ -47,7 +47,7 @@ jobs:
with:
python-version: ${{ matrix.python-version }}
- name: Install uv
uses: astral-sh/setup-uv@v6
uses: astral-sh/setup-uv@v7
- name: Get full Python version
id: full-python-version
shell: bash
.github/workflows/db_indexes.yaml
+1 -1
View File
@@ -49,7 +49,7 @@ jobs:
with:
python-version: ${{ matrix.python-version }}
- name: Install uv
uses: astral-sh/setup-uv@v6
uses: astral-sh/setup-uv@v7
- name: Get full Python version
id: full-python-version
shell: bash
.github/workflows/dependencies.yaml
+1 -1
View File
@@ -16,7 +16,7 @@ jobs:
with:
python-version: '3.9'
- name: Install uv
uses: astral-sh/setup-uv@v6
uses: astral-sh/setup-uv@v7
- name: Update dependencies
run: make update-dependencies
- name: Create pull request
.github/workflows/deployment.yaml
+1 -1
View File
@@ -39,7 +39,7 @@ jobs:
with:
python-version: ${{ matrix.python-version }}
- name: Install uv
uses: astral-sh/setup-uv@v6
uses: astral-sh/setup-uv@v7
- uses: nanasess/setup-chromedriver@v2
- name: Run tests
run: bash ./test/deployment/usegalaxystar.bash
.github/workflows/docs.yaml
+1 -1
View File
@@ -36,7 +36,7 @@ jobs:
with:
python-version: ${{ matrix.python-version }}
- name: Install uv
uses: astral-sh/setup-uv@v6
uses: astral-sh/setup-uv@v7
- name: Install Python dependencies
run: uv pip install --system -r requirements.txt -r lib/galaxy/dependencies/dev-requirements.txt sphinxcontrib-simpleversioning
- name: Add Google Analytics to doc/source/conf.py
.github/workflows/first_startup.yaml
+1 -1
View File
@@ -39,7 +39,7 @@ jobs:
with:
python-version: ${{ matrix.python-version }}
- name: Install uv
uses: astral-sh/setup-uv@v6
uses: astral-sh/setup-uv@v7
- name: Get full Python version
id: full-python-version
shell: bash
.github/workflows/framework_tools.yaml
+1 -1
View File
@@ -50,7 +50,7 @@ jobs:
with:
python-version: ${{ matrix.python-version }}
- name: Install uv
uses: astral-sh/setup-uv@v6
uses: astral-sh/setup-uv@v7
- name: Get full Python version
id: full-python-version
shell: bash
.github/workflows/framework_workflows.yaml
+1 -1
View File
@@ -51,7 +51,7 @@ jobs:
with:
python-version: ${{ matrix.python-version }}
- name: Install uv
uses: astral-sh/setup-uv@v6
uses: astral-sh/setup-uv@v7
- name: Get full Python version
id: full-python-version
shell: bash
.github/workflows/integration.yaml
+1 -1
View File
@@ -59,7 +59,7 @@ jobs:
with:
python-version: ${{ matrix.python-version }}
- name: Install uv
uses: astral-sh/setup-uv@v6
uses: astral-sh/setup-uv@v7
- name: Get full Python version
id: full-python-version
shell: bash
.github/workflows/integration_selenium.yaml
+1 -1
View File
@@ -58,7 +58,7 @@ jobs:
with:
python-version: ${{ matrix.python-version }}
- name: Install uv
uses: astral-sh/setup-uv@v6
uses: astral-sh/setup-uv@v7
- name: Get full Python version
id: full-python-version
shell: bash
.github/workflows/lint.yaml
+1 -1
View File
@@ -35,7 +35,7 @@ jobs:
with:
python-version: ${{ matrix.python-version }}
- name: Install uv
uses: astral-sh/setup-uv@v6
uses: astral-sh/setup-uv@v7
- name: Get full Python version
id: full-python-version
shell: bash
.github/workflows/main_tools.yaml
+1 -1
View File
@@ -43,7 +43,7 @@ jobs:
with:
python-version: ${{ matrix.python-version }}
- name: Install uv
uses: astral-sh/setup-uv@v6
uses: astral-sh/setup-uv@v7
- name: Get full Python version
id: full-python-version
shell: bash
.github/workflows/mulled.yaml
+1 -1
View File
@@ -32,7 +32,7 @@ jobs:
with:
python-version: ${{ matrix.python-version }}
- name: Install uv
uses: astral-sh/setup-uv@v6
uses: astral-sh/setup-uv@v7
- name: Get full Python version
id: full-python-version
shell: bash
.github/workflows/osx_startup.yaml
+1 -1
View File
@@ -43,7 +43,7 @@ jobs:
key: galaxy-static-${{ needs.build-client.outputs.commit-id }}
path: 'galaxy root/static'
- name: Install uv
uses: astral-sh/setup-uv@v6
uses: astral-sh/setup-uv@v7
- name: Install tox
run: uv tool install tox --with tox-uv
- name: Run tests
.github/workflows/performance.yaml
+1 -1
View File
@@ -49,7 +49,7 @@ jobs:
with:
python-version: ${{ matrix.python-version }}
- name: Install uv
uses: astral-sh/setup-uv@v6
uses: astral-sh/setup-uv@v7
- name: Get full Python version
id: full-python-version
shell: bash
.github/workflows/publish_artifacts.yaml
+1 -1
View File
@@ -18,7 +18,7 @@ jobs:
with:
python-version: ${{ matrix.python-version }}
- name: Install uv
uses: astral-sh/setup-uv@v6
uses: astral-sh/setup-uv@v7
- name: Install script dependencies
run: uv tool install galaxy-release-util
- name: Build and publish to PyPI
.github/workflows/reports_startup.yaml
+1 -1
View File
@@ -34,7 +34,7 @@ jobs:
with:
python-version: ${{ matrix.python-version }}
- name: Install uv
uses: astral-sh/setup-uv@v6
uses: astral-sh/setup-uv@v7
- name: Get full Python version
id: full-python-version
shell: bash
.github/workflows/selenium.yaml
+1 -1
View File
@@ -58,7 +58,7 @@ jobs:
with:
python-version: ${{ matrix.python-version }}
- name: Install uv
uses: astral-sh/setup-uv@v6
uses: astral-sh/setup-uv@v7
- name: Get full Python version
id: full-python-version
shell: bash
.github/workflows/test_galaxy_packages.yaml
+1 -1
View File
@@ -28,7 +28,7 @@ jobs:
with:
python-version: ${{ matrix.python-version }}
- name: Install uv
uses: astral-sh/setup-uv@v6
uses: astral-sh/setup-uv@v7
- name: Install ffmpeg
run: sudo apt-get update && sudo apt-get -y install ffmpeg
- name: Install tox
.github/workflows/test_galaxy_packages_for_pulsar.yaml
+1 -1
View File
@@ -30,7 +30,7 @@ jobs:
with:
python-version: ${{ matrix.python-version }}
- name: Install uv
uses: astral-sh/setup-uv@v6
uses: astral-sh/setup-uv@v7
- name: Install Apptainer's singularity
uses: eWaterCycle/setup-apptainer@v2
- name: Install ffmpeg
.github/workflows/toolshed.yaml
+1 -1
View File
@@ -44,7 +44,7 @@ jobs:
with:
python-version: ${{ matrix.python-version }}
- name: Install uv
uses: astral-sh/setup-uv@v6
uses: astral-sh/setup-uv@v7
- name: Get full Python version
id: full-python-version
shell: bash
.github/workflows/unit-postgres.yaml
+1 -1
View File
@@ -43,7 +43,7 @@ jobs:
with:
python-version: ${{ matrix.python-version }}
- name: Install uv
uses: astral-sh/setup-uv@v6
uses: astral-sh/setup-uv@v7
- name: Get full Python version
id: full-python-version
shell: bash
.github/workflows/unit.yaml
+1 -1
View File
@@ -32,7 +32,7 @@ jobs:
with:
python-version: ${{ matrix.python-version }}
- name: Install uv
uses: astral-sh/setup-uv@v6
uses: astral-sh/setup-uv@v7
- name: Get full Python version
id: full-python-version
shell: bash