Merge pull request #19003 from esg-epfl-apc/fits-graph-visualization-plugin-pr

FITS file table graph visualization plugin

client/gulpfile.js

@@ -18,6 +18,7 @@ const STATIC_PLUGIN_BUILD_IDS = [
     "drawrna",
     "editor",
     "example",
+    "fits_graph_viewer",
     "fits_image_viewer",
     "h5web",
     "heatmap/heatmap_default",

config/plugins/visualizations/fits_graph_viewer/config/fits_graph_viewer.xml

@@ -0,0 +1,16 @@
+<?xml version="1.0" encoding="UTF-8"?>
+<!DOCTYPE visualization SYSTEM "../../visualization.dtd">
+<visualization name="FITS Graph viewer" embeddable="false">
+    <description>Basic plugin for fits file table visualization</description>
+    <data_sources>
+        <data_source>
+            <model_class>HistoryDatasetAssociation</model_class>
+            <test type="isinstance" test_attr="datatype" result_type="datatype">binary.FITS</test>
+            <to_param param_attr="id">dataset_id</to_param>
+        </data_source>
+    </data_sources>
+    <params>
+        <param type="dataset" var_name_in_template="hda" required="true">dataset_id</param>
+    </params>
+    <entry_point entry_point_type="script" src="fits_graph_viewer.js"/>
+</visualization>

config/plugins/visualizations/fits_graph_viewer/package.json

@@ -0,0 +1,21 @@
+{
+    "name": "fits-graph-visualization",
+    "version": "1.0.0",
+    "keywords": [
+        "galaxy",
+        "visualization"
+    ],
+    "main": "index.js",
+    "license": "AFL-3.0",
+    "dependencies": {
+        "astrovisjs": "0.9.92",
+        "webpack": "^5.94.0"
+    },
+    "devDependencies": {
+        "webpack-cli": "^5.1.4"
+    },
+    "scripts": {
+        "build": "npx webpack build --config webpack.prod.js --output-path=./static"
+    }
+}
+

config/plugins/visualizations/fits_graph_viewer/src/index.js

@@ -0,0 +1,13 @@
+import {init} from 'astrovisjs/dist/astrovis/astrovis';
+
+document.addEventListener('DOMContentLoaded', () => {
+
+    const {root, visualization_config} = JSON.parse(
+        document.getElementById("app")
+            .getAttribute("data-incoming") || "{}");
+
+    const dataset_id = visualization_config.dataset_id;
+    const file_url = root + "datasets/" + dataset_id + "/display"
+
+    init('app', file_url);
+});

config/plugins/visualizations/fits_graph_viewer/webpack.prod.js

@@ -0,0 +1,9 @@
+const path = require('path');
+
+module.exports = {
+    mode: 'production',
+    entry: './src/index.js',
+    output: {
+        filename: 'fits_graph_viewer.js'
+    },
+};