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Merge pull request #1758 from jmchilton/ts_section_fix

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[16.01] Fix updating in-memory tools for tool shed installs into sections.
This commit is contained in:
Daniel Blankenberg
2016-02-18 15:03:52 -05:00
parent 3f34131ff5 4c0993cc42
commit b4c823f2cd
1 changed files with 3 additions and 3 deletions
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lib/galaxy/tools/toolbox/base.py
+3 -3
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@@ -176,7 +176,7 @@ class AbstractToolBox( Dictifiable, ManagesIntegratedToolPanelMixin, object ):
elif item_type == 'workflow':
self._load_workflow_tag_set( item, panel_dict=panel_dict, integrated_panel_dict=integrated_panel_dict, load_panel_dict=load_panel_dict, index=index )
elif item_type == 'section':
self._load_section_tag_set( item, tool_path=tool_path, load_panel_dict=load_panel_dict, index=index )
self._load_section_tag_set( item, tool_path=tool_path, load_panel_dict=load_panel_dict, index=index, internal=internal )
elif item_type == 'label':
self._load_label_tag_set( item, panel_dict=panel_dict, integrated_panel_dict=integrated_panel_dict, load_panel_dict=load_panel_dict, index=index )
elif item_type == 'tool_dir':
@@ -651,7 +651,7 @@ class AbstractToolBox( Dictifiable, ManagesIntegratedToolPanelMixin, object ):
panel_dict[ key ] = label
integrated_panel_dict.update_or_append( index, key, label )
def _load_section_tag_set( self, item, tool_path, load_panel_dict, index=None ):
def _load_section_tag_set( self, item, tool_path, load_panel_dict, index=None, internal=False ):
key = item.get( "id" )
if key in self._tool_panel:
section = self._tool_panel[ key ]
@@ -674,7 +674,7 @@ class AbstractToolBox( Dictifiable, ManagesIntegratedToolPanelMixin, object ):
load_panel_dict=load_panel_dict,
guid=sub_item.get( 'guid' ),
index=sub_index,
internal=True,
internal=internal,
)
# Ensure each tool's section is stored