Merge branch 'release_23.2' into dev

.github/workflows/docs.yaml

@@ -62,7 +62,7 @@ jobs:
           AWS_SECRET_ACCESS_KEY: ${{ secrets.AWS_SECRET_ACCESS_KEY }}
         run: |
           case "$TARGET_BRANCH" in
-              release_[[:digit:]][[:digit:]].[[:digit:]][[:digit:]]|master)
+              release_[[:digit:]][[:digit:]].[[:digit:]][[:digit:]] | release_[[:digit:]][[:digit:]].[[:digit:]] | master)
                   UPLOAD_DIR=$TARGET_BRANCH
                   ;;
               dev)

client/src/components/Form/Elements/FormData/FormData.test.js

@@ -186,6 +186,61 @@ describe("FormData", () => {
         expect(wrapper.emitted().input[1][0]).toEqual(value_sorted);
     });
 
+    it("sorts mixed dces and hdas", async () => {
+        const sortOptions = {
+            hda: [
+                { id: "hda1", hid: 1, name: "hdaName1", src: "hda", tags: ["tag1"] },
+                { id: "hda2", hid: 2, name: "hdaName2", src: "hda", tags: ["tag1", "tag2"] },
+                { id: "hda3", hid: 3, name: "hdaName3", src: "hda", tags: ["tag2", "tag3"] },
+                { id: "hda4", hid: 4, name: "hdaName4", src: "hda" },
+            ],
+            dce: [
+                { id: "dce1", name: "dceName1", src: "dce", is_dataset: true },
+                { id: "dce2", name: "dceName2", src: "dce", is_dataset: true },
+                { id: "dce3", name: "dceName3", src: "dce", is_dataset: true },
+                { id: "dce4", name: "dceName4", src: "dce", is_dataset: true },
+            ],
+        };
+        const wrapper = createTarget({
+            //intermix hdas and dces in the selected options
+            value: {
+                values: [
+                    { id: "hda1", src: "hda" },
+                    { id: "dce4", src: "dce" },
+                    { id: "dce2", src: "dce" },
+                    { id: "hda2", src: "hda" },
+                    { id: "dce3", src: "dce" },
+                ],
+            },
+            multiple: true,
+            optional: true,
+            options: sortOptions,
+        });
+        const selectedValues = wrapper.findAll(SELECTED_VALUE);
+        expect(selectedValues.length).toBe(5);
+        // when dces are mixed in their values are shown first and are
+        // ordered by id descending
+        expect(selectedValues.at(0).text()).toBe("dceName4 (as dataset)");
+        expect(selectedValues.at(1).text()).toBe("dceName3 (as dataset)");
+        expect(selectedValues.at(2).text()).toBe("dceName2 (as dataset)");
+        expect(selectedValues.at(3).text()).toBe("2: hdaName2");
+        expect(selectedValues.at(4).text()).toBe("1: hdaName1");
+        await selectedValues.at(0).trigger("click");
+        const value_sorted = {
+            batch: false,
+            product: false,
+            values: [
+                // when dces are mixed in, they are emitted first
+                // and are sorted by id descending
+                { id: "dce3", map_over_type: null, src: "dce" },
+                { id: "dce2", map_over_type: null, src: "dce" },
+                { id: "hda1", map_over_type: null, src: "hda" },
+                { id: "hda2", map_over_type: null, src: "hda" },
+            ],
+        };
+        expect(wrapper.emitted().input[1][0]).toEqual(value_sorted);
+    });
+
     it("dataset collection as hda", async () => {
         const wrapper = createTarget({
             value: { values: [{ id: "dce1", src: "dce" }] },

client/src/components/History/CurrentHistory/HistoryOperations/SelectionOperations.test.js

@@ -84,20 +84,33 @@ describe("History Selection Operations", () => {
                 expect(wrapper.find(option).exists()).toBe(false);
             });
 
-            it("should display 'unhide' option only on hidden items", async () => {
+            it("should display 'unhide' option on hidden items", async () => {
                 const option = '[data-description="unhide option"]';
                 expect(wrapper.find(option).exists()).toBe(false);
                 await wrapper.setProps({ filterText: "visible:false" });
                 expect(wrapper.find(option).exists()).toBe(true);
             });
 
-            it("should display 'delete' option only on non-deleted items", async () => {
+            it("should display 'unhide' option when hidden and visible items are mixed", async () => {
+                const option = '[data-description="unhide option"]';
+                expect(wrapper.find(option).exists()).toBe(false);
+                await wrapper.setProps({ filterText: "visible:any" });
+                expect(wrapper.find(option).exists()).toBe(true);
+            });
+
+            it("should display 'delete' option on non-deleted items", async () => {
                 const option = '[data-description="delete option"]';
                 expect(wrapper.find(option).exists()).toBe(true);
                 await wrapper.setProps({ filterText: "deleted:true" });
                 expect(wrapper.find(option).exists()).toBe(false);
             });
 
+            it("should display 'delete' option when non-deleted and deleted items are mixed", async () => {
+                const option = '[data-description="delete option"]';
+                await wrapper.setProps({ filterText: "deleted:any" });
+                expect(wrapper.find(option).exists()).toBe(true);
+            });
+
             it("should display 'permanently delete' option always", async () => {
                 const option = '[data-description="purge option"]';
                 expect(wrapper.find(option).exists()).toBe(true);
@@ -105,7 +118,7 @@ describe("History Selection Operations", () => {
                 expect(wrapper.find(option).exists()).toBe(true);
             });
 
-            it("should display 'undelete' option only on deleted and non-purged items", async () => {
+            it("should display 'undelete' option on deleted and non-purged items", async () => {
                 const option = '[data-description="undelete option"]';
                 expect(wrapper.find(option).exists()).toBe(false);
                 await wrapper.setProps({
@@ -115,6 +128,15 @@ describe("History Selection Operations", () => {
                 expect(wrapper.find(option).exists()).toBe(true);
             });
 
+            it("should display 'undelete' option when non-purged items (deleted or not) are mixed", async () => {
+                const option = '[data-description="undelete option"]';
+                await wrapper.setProps({
+                    filterText: "deleted:any",
+                    contentSelection: getNonPurgedContentSelection(),
+                });
+                expect(wrapper.find(option).exists()).toBe(true);
+            });
+
             it("should not display 'undelete' when is manual selection mode and all selected items are purged", async () => {
                 const option = '[data-description="undelete option"]';
                 await wrapper.setProps({
@@ -136,6 +158,17 @@ describe("History Selection Operations", () => {
                 expect(wrapper.find(option).exists()).toBe(true);
             });
 
+            it("should display 'undelete' option when is query selection mode and filtering by any deleted state", async () => {
+                const option = '[data-description="undelete option"]';
+                // In query selection mode we don't know if some items may not be purged, so we allow to undelete
+                await wrapper.setProps({
+                    filterText: "deleted:any",
+                    contentSelection: getPurgedContentSelection(),
+                    isQuerySelection: true,
+                });
+                expect(wrapper.find(option).exists()).toBe(true);
+            });
+
             it("should display collection building options only on visible and non-deleted items", async () => {
                 const buildListOption = '[data-description="build list"]';
                 const buildPairOption = '[data-description="build pair"]';
@@ -151,6 +184,14 @@ describe("History Selection Operations", () => {
                 expect(wrapper.find(buildListOption).exists()).toBe(false);
                 expect(wrapper.find(buildPairOption).exists()).toBe(false);
                 expect(wrapper.find(buildListOfPairsOption).exists()).toBe(false);
+                await wrapper.setProps({ filterText: "visible:any" });
+                expect(wrapper.find(buildListOption).exists()).toBe(false);
+                expect(wrapper.find(buildPairOption).exists()).toBe(false);
+                expect(wrapper.find(buildListOfPairsOption).exists()).toBe(false);
+                await wrapper.setProps({ filterText: "deleted:any" });
+                expect(wrapper.find(buildListOption).exists()).toBe(false);
+                expect(wrapper.find(buildPairOption).exists()).toBe(false);
+                expect(wrapper.find(buildListOfPairsOption).exists()).toBe(false);
             });
 
             it("should display list building option when all are selected", async () => {

client/src/components/History/CurrentHistory/HistoryOperations/SelectionOperations.vue

@@ -24,7 +24,10 @@
                 data-description="undelete option">
                 <span v-localize>Undelete</span>
             </b-dropdown-item>
-            <b-dropdown-item v-if="!showDeleted" v-b-modal:delete-selected-content data-description="delete option">
+            <b-dropdown-item
+                v-if="!showStrictDeleted"
+                v-b-modal:delete-selected-content
+                data-description="delete option">
                 <span v-localize>Delete</span>
             </b-dropdown-item>
             <b-dropdown-item v-b-modal:purge-selected-content data-description="purge option">
@@ -191,10 +194,14 @@ export default {
     computed: {
         /** @returns {Boolean} */
         showHidden() {
-            return HistoryFilters.checkFilter(this.filterText, "visible", false);
+            return !HistoryFilters.checkFilter(this.filterText, "visible", true);
         },
         /** @returns {Boolean} */
         showDeleted() {
+            return !HistoryFilters.checkFilter(this.filterText, "deleted", false);
+        },
+        /** @returns {Boolean} */
+        showStrictDeleted() {
             return HistoryFilters.checkFilter(this.filterText, "deleted", true);
         },
         /** @returns {Boolean} */

client/src/components/Markdown/MarkdownSelector.vue

@@ -1,6 +1,12 @@
 <template>
     <span>
-        <b-modal v-model="modalShow" :title="title" ok-title="Continue" @ok="onOk" @cancel="onCancel">
+        <b-modal
+            v-model="modalShow"
+            :title="title"
+            ok-title="Continue"
+            @ok="onOk"
+            @cancel="onCancel"
+            @hidden="onCancel">
             <div class="ml-2">
                 <h2 class="mb-3 h-text">Select {{ labelTitle }} Label:</h2>
                 <div v-if="hasLabels">

client/src/components/Tool/utilities.js

@@ -2,7 +2,9 @@ import { getAppRoot } from "onload/loadConfig";
 import { copy } from "utils/clipboard";
 
 export function copyLink(toolId, message) {
-    copy(`${window.location.origin + getAppRoot()}root?tool_id=${toolId}`, message);
+    const link = `${window.location.origin + getAppRoot()}root?tool_id=${toolId}`;
+    // Encode the link to handle special characters in tool id
+    copy(encodeURI(link), message);
 }
 
 export function copyId(toolId, message) {

client/src/components/Tool/utilities.test.ts

@@ -0,0 +1,36 @@
+import { copyLink } from "./utilities";
+
+const writeText = jest.fn();
+
+Object.assign(navigator, {
+    clipboard: {
+        writeText,
+    },
+});
+
+describe("copyLink", () => {
+    beforeEach(() => {
+        (navigator.clipboard.writeText as jest.Mock).mockResolvedValue(undefined);
+    });
+
+    it("should copy the link to the clipboard", () => {
+        const toolId = "MyToolId";
+        copyLink(toolId);
+        expect(writeText).toHaveBeenCalledTimes(1);
+        expect(writeText).toHaveBeenCalledWith(expect.stringContaining(toolId));
+    });
+
+    it("should encode the tool id with spaces", () => {
+        const toolId = "My Tool Id";
+        copyLink(toolId);
+        expect(writeText).toHaveBeenCalledTimes(1);
+        expect(writeText).toHaveBeenCalledWith(expect.stringContaining("My%20Tool%20Id"));
+    });
+
+    it("should not encode the character '+' in the tool id", () => {
+        const toolId = "My Tool Id+1";
+        copyLink(toolId);
+        expect(writeText).toHaveBeenCalledTimes(1);
+        expect(writeText).toHaveBeenCalledWith(expect.stringContaining("My%20Tool%20Id+1"));
+    });
+});

client/src/components/Upload/DefaultBox.vue

@@ -99,18 +99,22 @@ const listExtensions = computed(() => props.effectiveExtensions.filter((ext) =>
 const showHelper = computed(() => Object.keys(uploadItems.value).length === 0);
 const uploadValues = computed(() => Object.values(uploadItems.value));
 
-const queue = new UploadQueue({
-    announce: eventAnnounce,
-    chunkSize: props.chunkUploadSize,
-    complete: eventComplete,
-    error: eventError,
-    get: (index) => uploadItems.value[index],
-    historyId: historyId.value,
-    multiple: props.multiple,
-    progress: eventProgress,
-    success: eventSuccess,
-    warning: eventWarning,
-});
+const queue = computed(() => createUploadQueue());
+
+function createUploadQueue() {
+    return new UploadQueue({
+        announce: eventAnnounce,
+        chunkSize: props.chunkUploadSize,
+        complete: eventComplete,
+        error: eventError,
+        get: (index) => uploadItems.value[index],
+        historyId: historyId.value,
+        multiple: props.multiple,
+        progress: eventProgress,
+        success: eventSuccess,
+        warning: eventWarning,
+    });
+}
 
 /** Add files to queue */
 function addFiles(files, immediate = false) {
@@ -119,9 +123,9 @@ function addFiles(files, immediate = false) {
             eventReset();
         }
         if (props.multiple) {
-            queue.add(files);
+            queue.value.add(files);
         } else if (files.length > 0) {
-            queue.add([files[0]]);
+            queue.value.add([files[0]]);
         }
     }
 }
@@ -165,7 +169,7 @@ function eventComplete() {
 
 /** Create a new file */
 function eventCreate() {
-    queue.add([{ name: DEFAULT_FILE_NAME, size: 0, mode: "new" }]);
+    queue.value.add([{ name: DEFAULT_FILE_NAME, size: 0, mode: "new" }]);
 }
 
 /** Error */
@@ -207,14 +211,14 @@ function eventRemove(index) {
         counterAnnounce.value--;
     }
     Vue.delete(uploadItems.value, index);
-    queue.remove(index);
+    queue.value.remove(index);
 }
 
 /** Show remote files dialog or FTP files */
 function eventRemoteFiles() {
     filesDialog(
         (items) => {
-            queue.add(
+            queue.value.add(
                 items.map((item) => {
                     const rval = {
                         mode: "url",
@@ -236,7 +240,7 @@ function eventReset() {
         counterAnnounce.value = 0;
         counterSuccess.value = 0;
         counterError.value = 0;
-        queue.reset();
+        queue.value.reset();
         uploadItems.value = {};
         extension.value = props.defaultExtension;
         dbKey.value = props.defaultDbKey;
@@ -269,7 +273,7 @@ function eventStart() {
         });
         emit("progress", 0, "success");
         counterRunning.value = counterAnnounce.value;
-        queue.start();
+        queue.value.start();
     }
 }
 
@@ -278,7 +282,7 @@ function eventStop() {
     if (isRunning.value) {
         emit("progress", null, "info");
         queueStopping.value = true;
-        queue.stop();
+        queue.value.stop();
     }
 }
 

lib/galaxy/config/sample/file_sources_conf.yml.sample

@@ -12,6 +12,12 @@
   root: ${user.preferences['owncloud|root']}
   login: ${user.preferences['owncloud|username']}
   password: ${user.preferences['owncloud|password']}
+  # By default, the plugin will use temp files to avoid loading entire files into memory. 
+  # You can change the directory here or omit to use the default temp directory.
+  temp_path: /your/temp/path
+  # Set writable to true if you have write access to this source
+  # and want to allow exporting files to it, by default is read only.
+  writable: false
 
 - type: posix
   root: '/data/5/galaxy_import/galaxy_user_data/covid-19/data/sequences/'

lib/galaxy/dependencies/pinned-requirements.txt

@@ -152,7 +152,7 @@ pysam==0.22.0 ; python_version >= "3.8" and python_version < "3.13"
 python-dateutil==2.8.2 ; python_version >= "3.8" and python_version < "3.13"
 python-jose==3.3.0 ; python_version >= "3.8" and python_version < "3.13"
 python-magic==0.4.27 ; python_version >= "3.8" and python_version < "3.13"
-python-multipart==0.0.6 ; python_version >= "3.8" and python_version < "3.13"
+python-multipart==0.0.7 ; python_version >= "3.8" and python_version < "3.13"
 python3-openid==3.2.0 ; python_version >= "3.8" and python_version < "3.13"
 pytz==2023.3.post1 ; python_version >= "3.8" and python_version < "3.13"
 pyyaml==6.0.1 ; python_version >= "3.8" and python_version < "3.13"

lib/galaxy/files/sources/webdav.py

@@ -3,6 +3,7 @@ try:
 except ImportError:
     WebDAVFS = None
 
+import tempfile
 from typing import (
     Optional,
     Union,
@@ -22,6 +23,11 @@ class WebDavFilesSource(PyFilesystem2FilesSource):
 
     def _open_fs(self, user_context=None, opts: Optional[FilesSourceOptions] = None):
         props = self._serialization_props(user_context)
+        use_temp_files = props.pop("use_temp_files", None)
+        if use_temp_files is None:
+            # Default to True to avoid memory issues with large files.
+            props["use_temp_files"] = True
+            props["temp_path"] = props.get("temp_path", tempfile.TemporaryDirectory(prefix="webdav_"))
         extra_props: Union[FilesSourceProperties, dict] = opts.extra_props or {} if opts else {}
         handle = WebDAVFS(**{**props, **extra_props})
         return handle

lib/galaxy/webapps/galaxy/services/history_contents.py

@@ -1433,8 +1433,12 @@ class HistoryItemOperator:
 
     def _delete(self, item: HistoryItemModel, trans: ProvidesHistoryContext):
         if isinstance(item, HistoryDatasetCollectionAssociation):
-            return self.dataset_collection_manager.delete(trans, "history", item.id, recursive=True, purge=False)
-        return self.hda_manager.delete(item, flush=self.flush)
+            self.dataset_collection_manager.delete(trans, "history", item.id, recursive=True, purge=False)
+        else:
+            self.hda_manager.delete(item, flush=self.flush)
+        # In the edge case where all selected items are already deleted we need to force an update
+        # otherwise the history will wait indefinitely for the items to be deleted
+        item.update()
 
     def _undelete(self, item: HistoryItemModel):
         if getattr(item, "purged", False):

packages/app/HISTORY.rst

@@ -4,11 +4,10 @@ History
 .. to_doc
 
 ---------
-23.3.dev0
+24.0.dev0
 ---------
 
 
-
 -------------------
 23.1.4 (2024-01-04)
 -------------------
@@ -60,8 +59,6 @@ Enhancements
 Bug fixes
 =========
 
-* 
-* 
 * read job_conf directly from `config_dir` instead of computing it again from `config_file` by `@bernt-matthias <https://github.com/bernt-matthias>`_ in `#15596 <https://github.com/galaxyproject/galaxy/pull/15596>`_
 * Fix some drs handling issues by `@nuwang <https://github.com/nuwang>`_ in `#15777 <https://github.com/galaxyproject/galaxy/pull/15777>`_
 * Fix filesource file url support by `@nuwang <https://github.com/nuwang>`_ in `#15794 <https://github.com/galaxyproject/galaxy/pull/15794>`_
@@ -117,8 +114,6 @@ Bug fixes
 Enhancements
 ============
 
-* 
-* 
 * Empower Users to Select Storage Destination by `@jmchilton <https://github.com/jmchilton>`_ in `#14073 <https://github.com/galaxyproject/galaxy/pull/14073>`_
 * External Login Flow: Redirect users if account already exists by `@ahmedhamidawan <https://github.com/ahmedhamidawan>`_ in `#15019 <https://github.com/galaxyproject/galaxy/pull/15019>`_
 * Add slack error reporting plugin by `@hexylena <https://github.com/hexylena>`_ in `#15025 <https://github.com/galaxyproject/galaxy/pull/15025>`_
@@ -204,9 +199,6 @@ Other changes
 Bug fixes
 =========
 
-* 
-* 
-* 
 * Fix upload paramfile handling (for real user setups) by `@bernt-matthias <https://github.com/bernt-matthias>`_ in `#16504 <https://github.com/galaxyproject/galaxy/pull/16504>`_
 * Fix extra files path handling by `@mvdbeek <https://github.com/mvdbeek>`_ in `#16541 <https://github.com/galaxyproject/galaxy/pull/16541>`_
 * Make sure job_wrapper uses a consistent metadata strategy by `@mvdbeek <https://github.com/mvdbeek>`_ in `#16569 <https://github.com/galaxyproject/galaxy/pull/16569>`_
@@ -220,9 +212,6 @@ Bug fixes
 Enhancements
 ============
 
-* 
-* 
-* 
 * Update pulsar client library to 0.15.5 by `@mvdbeek <https://github.com/mvdbeek>`_ in `#16701 <https://github.com/galaxyproject/galaxy/pull/16701>`_
 
 -------------------
@@ -234,10 +223,6 @@ Enhancements
 Bug fixes
 =========
 
-* 
-* 
-* 
-* 
 * Skip installing npm/yarn if available, fix conditional dependency parsing, create virtualenv via conda when conda active by `@bernt-matthias <https://github.com/bernt-matthias>`_ in `#16403 <https://github.com/galaxyproject/galaxy/pull/16403>`_
 * Fix test discovery in vscode by `@mvdbeek <https://github.com/mvdbeek>`_ in `#16413 <https://github.com/galaxyproject/galaxy/pull/16413>`_
 * Fixes for (gitlab) error reporting by `@bernt-matthias <https://github.com/bernt-matthias>`_ in `#16424 <https://github.com/galaxyproject/galaxy/pull/16424>`_
@@ -251,11 +236,6 @@ Bug fixes
 Bug fixes
 =========
 
-* 
-* 
-* 
-* 
-* 
 * Fix default when statement evaluation by `@mvdbeek <https://github.com/mvdbeek>`_ in `#16332 <https://github.com/galaxyproject/galaxy/pull/16332>`_
 * Redact private role name and description when purging user by `@mvdbeek <https://github.com/mvdbeek>`_ in `#16349 <https://github.com/galaxyproject/galaxy/pull/16349>`_
 
@@ -268,31 +248,18 @@ Bug fixes
 Bug fixes
 =========
 
-* 
-* 
-* 
-* 
-* 
-* 
 * Bump galaxy-release-util version to 0.1.2 by `@mvdbeek <https://github.com/mvdbeek>`_ in `#16241 <https://github.com/galaxyproject/galaxy/pull/16241>`_
 
 ============
 Enhancements
 ============
 
-* 
-* 
-* 
-* 
 * When importing tool data bundles, use the first loc file for the matching table by `@natefoo <https://github.com/natefoo>`_ in `#16247 <https://github.com/galaxyproject/galaxy/pull/16247>`_
 
 =============
 Other changes
 =============
 
-* 
-* 
-* 
 * Forward port of slugify username received from oidc by `@nuwang <https://github.com/nuwang>`_ in `#16271 <https://github.com/galaxyproject/galaxy/pull/16271>`_
 
 -------------------
@@ -304,26 +271,12 @@ Other changes
 Bug fixes
 =========
 
-* 
-* 
-* 
-* 
-* 
-* 
-* 
 * Fix ``Text File Busy`` errors at the source by `@mvdbeek <https://github.com/mvdbeek>`_ in `#16212 <https://github.com/galaxyproject/galaxy/pull/16212>`_
 
 ============
 Enhancements
 ============
 
-* 
-* 
-* 
-* 
-* 
-* 
-* 
 * Point release deps fixes and docs by `@mvdbeek <https://github.com/mvdbeek>`_ in `#16214 <https://github.com/galaxyproject/galaxy/pull/16214>`_
 * Use galaxy-release-util to upload python packages by `@mvdbeek <https://github.com/mvdbeek>`_ in `#16240 <https://github.com/galaxyproject/galaxy/pull/16240>`_
 
@@ -336,14 +289,6 @@ Enhancements
 Bug fixes
 =========
 
-* 
-* 
-* 
-* 
-* 
-* 
-* 
-* 
 * Display DCE in job parameter component, allow rerunning with DCE input by `@mvdbeek <https://github.com/mvdbeek>`_ in `#15744 <https://github.com/galaxyproject/galaxy/pull/15744>`_
 * Fix mixed outputs_to_working_directory pulsar destinations by `@mvdbeek <https://github.com/mvdbeek>`_ in `#15927 <https://github.com/galaxyproject/galaxy/pull/15927>`_
 * Update Gravity to 1.0.3 by `@natefoo <https://github.com/natefoo>`_ in `#15939 <https://github.com/galaxyproject/galaxy/pull/15939>`_
@@ -367,13 +312,6 @@ Bug fixes
 Other changes
 =============
 
-* 
-* 
-* 
-* 
-* 
-* 
-* 
 * Startup fix when tool removed between reboot by `@mvdbeek <https://github.com/mvdbeek>`_ in `#16175 <https://github.com/galaxyproject/galaxy/pull/16175>`_
 
 -------------------

packages/app/setup.cfg

@@ -27,7 +27,7 @@ long_description = file: README.rst, HISTORY.rst
 long_description_content_type = text/x-rst
 name = galaxy-app
 url = https://github.com/galaxyproject/galaxy
-version = 23.1.dev0
+version = 23.2.dev0
 
 [options]
 include_package_data = True

packages/auth/HISTORY.rst

@@ -4,11 +4,10 @@ History
 .. to_doc
 
 ---------
-23.3.dev0
+24.0.dev0
 ---------
 
 
-
 -------------------
 23.1.4 (2024-01-04)
 -------------------

packages/auth/setup.cfg

@@ -27,7 +27,7 @@ long_description = file: README.rst, HISTORY.rst
 long_description_content_type = text/x-rst
 name = galaxy-auth
 url = https://github.com/galaxyproject/galaxy
-version = 23.1.dev0
+version = 23.2.dev0
 
 [options]
 include_package_data = True

packages/config/HISTORY.rst

@@ -4,11 +4,10 @@ History
 .. to_doc
 
 ---------
-23.3.dev0
+24.0.dev0
 ---------
 
 
-
 -------------------
 23.1.4 (2024-01-04)
 -------------------
@@ -48,8 +47,6 @@ Enhancements
 Bug fixes
 =========
 
-* 
-* 
 * Fix some drs handling issues by `@nuwang <https://github.com/nuwang>`_ in `#15777 <https://github.com/galaxyproject/galaxy/pull/15777>`_
 * Improve container resolver documentation by `@mvdbeek <https://github.com/mvdbeek>`_ in `#16280 <https://github.com/galaxyproject/galaxy/pull/16280>`_
 * Limit tool document cache to tool configs with explicit cache path by `@mvdbeek <https://github.com/mvdbeek>`_ in `#16537 <https://github.com/galaxyproject/galaxy/pull/16537>`_
@@ -60,8 +57,6 @@ Bug fixes
 Enhancements
 ============
 
-* 
-* 
 * External Login Flow: Redirect users if account already exists by `@ahmedhamidawan <https://github.com/ahmedhamidawan>`_ in `#15019 <https://github.com/galaxyproject/galaxy/pull/15019>`_
 * Add slack error reporting plugin by `@hexylena <https://github.com/hexylena>`_ in `#15025 <https://github.com/galaxyproject/galaxy/pull/15025>`_
 * Documents use of k8s_extra_job_envs in job_conf sample advanced by `@pcm32 <https://github.com/pcm32>`_ in `#15110 <https://github.com/galaxyproject/galaxy/pull/15110>`_
@@ -105,9 +100,6 @@ No recorded changes since last release
 Bug fixes
 =========
 
-* 
-* 
-* 
 * Minor bug fix for default mail templates by `@neoformit <https://github.com/neoformit>`_ in `#16362 <https://github.com/galaxyproject/galaxy/pull/16362>`_
 
 -------------------
@@ -137,20 +129,12 @@ No recorded changes since last release
 Bug fixes
 =========
 
-* 
-* 
-* 
-* 
-* 
 * Change default watchdog inotify_buffer log level to info by `@mvdbeek <https://github.com/mvdbeek>`_ in `#15967 <https://github.com/galaxyproject/galaxy/pull/15967>`_
 
 ============
 Enhancements
 ============
 
-* 
-* 
-* 
 * Add ``ca_certs`` option for sentry client by `@mvdbeek <https://github.com/mvdbeek>`_ in `#15943 <https://github.com/galaxyproject/galaxy/pull/15943>`_
 
 -------------------

packages/config/setup.cfg

@@ -27,7 +27,7 @@ long_description = file: README.rst, HISTORY.rst
 long_description_content_type = text/x-rst
 name = galaxy-config
 url = https://github.com/galaxyproject/galaxy
-version = 23.1.dev0
+version = 23.2.dev0
 
 [options]
 include_package_data = True

packages/data/HISTORY.rst

@@ -4,11 +4,10 @@ History
 .. to_doc
 
 ---------
-23.3.dev0
+24.0.dev0
 ---------
 
 
-
 -------------------
 23.1.4 (2024-01-04)
 -------------------
@@ -46,7 +45,6 @@ Bug fixes
 Bug fixes
 =========
 
-* 
 * Skip change_datatype things if we're not actually changing the extension by `@mvdbeek <https://github.com/mvdbeek>`_ in `#16931 <https://github.com/galaxyproject/galaxy/pull/16931>`_
 * Fix copying metadata to copied job outputs by `@mvdbeek <https://github.com/mvdbeek>`_ in `#17007 <https://github.com/galaxyproject/galaxy/pull/17007>`_
 * Update tar_to_directory dependency by `@mvdbeek <https://github.com/mvdbeek>`_ in `#17009 <https://github.com/galaxyproject/galaxy/pull/17009>`_
@@ -70,8 +68,6 @@ Enhancements
 Bug fixes
 =========
 
-* 
-* 
 * Fix bad auto-merge of dev. by `@jmchilton <https://github.com/jmchilton>`_ in `#15386 <https://github.com/galaxyproject/galaxy/pull/15386>`_
 * Merge conflicting db migration branches into one by `@jdavcs <https://github.com/jdavcs>`_ in `#15771 <https://github.com/galaxyproject/galaxy/pull/15771>`_
 * Enable ``strict_equality`` mypy option by `@nsoranzo <https://github.com/nsoranzo>`_ in `#15808 <https://github.com/galaxyproject/galaxy/pull/15808>`_
@@ -102,8 +98,6 @@ Bug fixes
 Enhancements
 ============
 
-* 
-* 
 * Empower Users to Select Storage Destination by `@jmchilton <https://github.com/jmchilton>`_ in `#14073 <https://github.com/galaxyproject/galaxy/pull/14073>`_
 * Add Storage Dashboard visualizations for histories by `@davelopez <https://github.com/davelopez>`_ in `#14820 <https://github.com/galaxyproject/galaxy/pull/14820>`_
 * Towards decoupling datatypes and model by `@jdavcs <https://github.com/jdavcs>`_ in `#15186 <https://github.com/galaxyproject/galaxy/pull/15186>`_
@@ -162,9 +156,6 @@ Other changes
 Bug fixes
 =========
 
-* 
-* 
-* 
 * Fix extra files path handling by `@mvdbeek <https://github.com/mvdbeek>`_ in `#16541 <https://github.com/galaxyproject/galaxy/pull/16541>`_
 * Don't fail invocation message without dependent_workflow_step_id by `@mvdbeek <https://github.com/mvdbeek>`_ in `#16628 <https://github.com/galaxyproject/galaxy/pull/16628>`_
 
@@ -177,10 +168,6 @@ Bug fixes
 Bug fixes
 =========
 
-* 
-* 
-* 
-* 
 * Copy when_expression when copying workflow step by `@mvdbeek <https://github.com/mvdbeek>`_ in `#16377 <https://github.com/galaxyproject/galaxy/pull/16377>`_
 
 -------------------
@@ -210,11 +197,6 @@ No recorded changes since last release
 Bug fixes
 =========
 
-* 
-* 
-* 
-* 
-* 
 * Display DCE in job parameter component, allow rerunning with DCE input by `@mvdbeek <https://github.com/mvdbeek>`_ in `#15744 <https://github.com/galaxyproject/galaxy/pull/15744>`_
 * Fix folder listing via file browser by `@mvdbeek <https://github.com/mvdbeek>`_ in `#15950 <https://github.com/galaxyproject/galaxy/pull/15950>`_
 * Fix RO-crate invocation export with complex collections by `@davelopez <https://github.com/davelopez>`_ in `#15971 <https://github.com/galaxyproject/galaxy/pull/15971>`_

packages/data/setup.cfg

@@ -27,7 +27,7 @@ long_description = file: README.rst, HISTORY.rst
 long_description_content_type = text/x-rst
 name = galaxy-data
 url = https://github.com/galaxyproject/galaxy
-version = 23.1.dev0
+version = 23.2.dev0
 
 [options]
 include_package_data = True

packages/files/HISTORY.rst

@@ -4,11 +4,10 @@ History
 .. to_doc
 
 ---------
-23.3.dev0
+24.0.dev0
 ---------
 
 
-
 -------------------
 23.1.4 (2024-01-04)
 -------------------
@@ -46,8 +45,6 @@ Bug fixes
 Bug fixes
 =========
 
-* 
-* 
 * Fix some drs handling issues by `@nuwang <https://github.com/nuwang>`_ in `#15777 <https://github.com/galaxyproject/galaxy/pull/15777>`_
 * Fix filesource file url support by `@nuwang <https://github.com/nuwang>`_ in `#15794 <https://github.com/galaxyproject/galaxy/pull/15794>`_
 * Fix unittest mocks to support us checking geturl()  by `@dannon <https://github.com/dannon>`_ in `#16726 <https://github.com/galaxyproject/galaxy/pull/16726>`_
@@ -92,9 +89,6 @@ No recorded changes since last release
 Bug fixes
 =========
 
-* 
-* 
-* 
 * Fix dropbox import to support newer versions by `@nuwang <https://github.com/nuwang>`_ in `#16239 <https://github.com/galaxyproject/galaxy/pull/16239>`_
 
 -------------------

packages/files/setup.cfg

@@ -27,7 +27,7 @@ long_description = file: README.rst, HISTORY.rst
 long_description_content_type = text/x-rst
 name = galaxy-files
 url = https://github.com/galaxyproject/galaxy
-version = 23.1.dev0
+version = 23.2.dev0
 
 [options]
 include_package_data = True

packages/job_execution/HISTORY.rst

@@ -4,11 +4,10 @@ History
 .. to_doc
 
 ---------
-23.3.dev0
+24.0.dev0
 ---------
 
 
-
 -------------------
 23.1.4 (2024-01-04)
 -------------------
@@ -43,8 +42,6 @@ Bug fixes
 Bug fixes
 =========
 
-* 
-* 
 * Fix tags ownership by `@davelopez <https://github.com/davelopez>`_ in `#16339 <https://github.com/galaxyproject/galaxy/pull/16339>`_
 * Push to object store even if ``set_meta`` fails by `@mvdbeek <https://github.com/mvdbeek>`_ in `#16667 <https://github.com/galaxyproject/galaxy/pull/16667>`_
 * Fix metadata setting in extended metadata + outputs_to_working_directory mode by `@mvdbeek <https://github.com/mvdbeek>`_ in `#16678 <https://github.com/galaxyproject/galaxy/pull/16678>`_
@@ -73,9 +70,6 @@ Enhancements
 Bug fixes
 =========
 
-* 
-* 
-* 
 * Fix extra files path handling by `@mvdbeek <https://github.com/mvdbeek>`_ in `#16541 <https://github.com/galaxyproject/galaxy/pull/16541>`_
 * Make sure job_wrapper uses a consistent metadata strategy by `@mvdbeek <https://github.com/mvdbeek>`_ in `#16569 <https://github.com/galaxyproject/galaxy/pull/16569>`_
 * Fixes for extra files handling and cached object stores  by `@mvdbeek <https://github.com/mvdbeek>`_ in `#16595 <https://github.com/galaxyproject/galaxy/pull/16595>`_

packages/job_execution/setup.cfg

@@ -27,7 +27,7 @@ long_description = file: README.rst, HISTORY.rst
 long_description_content_type = text/x-rst
 name = galaxy-job-execution
 url = https://github.com/galaxyproject/galaxy
-version = 23.1.dev0
+version = 23.2.dev0
 
 [options]
 include_package_data = True

packages/job_metrics/HISTORY.rst

@@ -4,11 +4,10 @@ History
 .. to_doc
 
 ---------
-23.3.dev0
+24.0.dev0
 ---------
 
 
-
 -------------------
 23.1.4 (2024-01-04)
 -------------------

packages/job_metrics/setup.cfg

@@ -28,7 +28,7 @@ long_description = file: README.rst, HISTORY.rst
 long_description_content_type = text/x-rst
 name = galaxy-job-metrics
 url = https://github.com/galaxyproject/galaxy
-version = 23.1.dev0
+version = 23.2.dev0
 
 [options]
 include_package_data = True

packages/meta/HISTORY.rst

@@ -3,9 +3,9 @@ History
 
 .. to_doc
 
----------------------
-22.5.0.dev0
----------------------
+---------
+23.2.dev0
+---------
 
 
 

packages/meta/setup.cfg

@@ -29,7 +29,7 @@ long_description = file: README.rst, HISTORY.rst
 long_description_content_type = text/x-rst
 name = galaxy
 url = https://github.com/galaxyproject/galaxy
-version = 22.5.0.dev0
+version = 23.2.dev0
 
 [options]
 include_package_data = True

packages/navigation/HISTORY.rst

@@ -4,11 +4,10 @@ History
 .. to_doc
 
 ---------
-23.3.dev0
+24.0.dev0
 ---------
 
 
-
 -------------------
 23.1.4 (2024-01-04)
 -------------------

packages/navigation/setup.cfg

@@ -27,7 +27,7 @@ long_description = file: README.rst, HISTORY.rst
 long_description_content_type = text/x-rst
 name = galaxy-navigation
 url = https://github.com/galaxyproject/galaxy
-version = 23.1.dev0
+version = 23.2.dev0
 
 [options]
 include_package_data = True

packages/objectstore/HISTORY.rst

@@ -4,11 +4,10 @@ History
 .. to_doc
 
 ---------
-23.3.dev0
+24.0.dev0
 ---------
 
 
-
 -------------------
 23.1.4 (2024-01-04)
 -------------------
@@ -67,9 +66,6 @@ Other changes
 Bug fixes
 =========
 
-* 
-* 
-* 
 * Fix extra files path handling by `@mvdbeek <https://github.com/mvdbeek>`_ in `#16541 <https://github.com/galaxyproject/galaxy/pull/16541>`_
 * Fixes for extra files handling and cached object stores  by `@mvdbeek <https://github.com/mvdbeek>`_ in `#16595 <https://github.com/galaxyproject/galaxy/pull/16595>`_
 

packages/objectstore/setup.cfg

@@ -28,7 +28,7 @@ long_description = file: README.rst, HISTORY.rst
 long_description_content_type = text/x-rst
 name = galaxy-objectstore
 url = https://github.com/galaxyproject/galaxy
-version = 23.1.dev0
+version = 23.2.dev0
 
 [options]
 include_package_data = True

packages/schema/HISTORY.rst

@@ -3,8 +3,8 @@ History
 
 .. to_doc
 
----------------------
-21.1.0.dev0
----------------------
+---------
+23.2.dev0
+---------
 
 * First release.

packages/schema/setup.cfg

@@ -27,7 +27,7 @@ long_description = file: README.rst, HISTORY.rst
 long_description_content_type = text/x-rst
 name = galaxy-schema
 url = https://github.com/galaxyproject/galaxy
-version = 23.1.0.dev0
+version = 23.2.dev0
 
 [options]
 include_package_data = True

packages/selenium/HISTORY.rst

@@ -4,11 +4,10 @@ History
 .. to_doc
 
 ---------
-23.3.dev0
+24.0.dev0
 ---------
 
 
-
 -------------------
 23.1.4 (2024-01-04)
 -------------------
@@ -92,9 +91,6 @@ No recorded changes since last release
 Enhancements
 ============
 
-* 
-* 
-* 
 * Port selenium setup to non-deprecated selenium options by `@mvdbeek <https://github.com/mvdbeek>`_ in `#16215 <https://github.com/galaxyproject/galaxy/pull/16215>`_
 
 -------------------
@@ -106,14 +102,6 @@ Enhancements
 Enhancements
 ============
 
-* 
-* 
-* 
-* 
-* 
-* 
-* 
-* 
 * Add support for launching workflows via Tutorial Mode by `@hexylena <https://github.com/hexylena>`_ in `#15684 <https://github.com/galaxyproject/galaxy/pull/15684>`_
 
 -------------------

packages/selenium/setup.cfg

@@ -27,7 +27,7 @@ long_description = file: README.rst, HISTORY.rst
 long_description_content_type = text/x-rst
 name = galaxy-selenium
 url = https://github.com/galaxyproject/galaxy
-version = 23.1.dev0
+version = 23.2.dev0
 
 [options]
 include_package_data = True

packages/test_api/HISTORY.rst

@@ -4,11 +4,10 @@ History
 .. to_doc
 
 ---------
-23.3.dev0
+24.0.dev0
 ---------
 
 
-
 -------------------
 23.1.4 (2024-01-04)
 -------------------
@@ -54,8 +53,6 @@ Enhancements
 Bug fixes
 =========
 
-* 
-* 
 * Ensure session is request-scoped for legacy endpoints by `@jdavcs <https://github.com/jdavcs>`_ in `#16207 <https://github.com/galaxyproject/galaxy/pull/16207>`_
 * allow anon access for api/datasets/get_content_as_text by `@martenson <https://github.com/martenson>`_ in `#16226 <https://github.com/galaxyproject/galaxy/pull/16226>`_
 * qualify querying for an api-key by `@martenson <https://github.com/martenson>`_ in `#16320 <https://github.com/galaxyproject/galaxy/pull/16320>`_
@@ -77,8 +74,6 @@ Bug fixes
 Enhancements
 ============
 
-* 
-* 
 * Empower Users to Select Storage Destination by `@jmchilton <https://github.com/jmchilton>`_ in `#14073 <https://github.com/galaxyproject/galaxy/pull/14073>`_
 * Outline Deployment Tests by `@jmchilton <https://github.com/jmchilton>`_ in `#15420 <https://github.com/galaxyproject/galaxy/pull/15420>`_
 * Unify url handling with filesources by `@nuwang <https://github.com/nuwang>`_ in `#15497 <https://github.com/galaxyproject/galaxy/pull/15497>`_
@@ -131,9 +126,6 @@ No recorded changes since last release
 Bug fixes
 =========
 
-* 
-* 
-* 
 * Display DCE in job parameter component, allow rerunning with DCE input by `@mvdbeek <https://github.com/mvdbeek>`_ in `#15744 <https://github.com/galaxyproject/galaxy/pull/15744>`_
 * Fix folder listing via file browser by `@mvdbeek <https://github.com/mvdbeek>`_ in `#15950 <https://github.com/galaxyproject/galaxy/pull/15950>`_
 * Fix case sensitive filtering by name in histories by `@davelopez <https://github.com/davelopez>`_ in `#16036 <https://github.com/galaxyproject/galaxy/pull/16036>`_
@@ -144,9 +136,6 @@ Bug fixes
 Enhancements
 ============
 
-* 
-* 
-* 
 * Add support for launching workflows via Tutorial Mode by `@hexylena <https://github.com/hexylena>`_ in `#15684 <https://github.com/galaxyproject/galaxy/pull/15684>`_
 * Allow setting auto_decompress property in staging interface by `@mvdbeek <https://github.com/mvdbeek>`_ in `#16014 <https://github.com/galaxyproject/galaxy/pull/16014>`_
 

packages/test_api/setup.cfg

@@ -27,7 +27,7 @@ long_description = file: README.rst, HISTORY.rst
 long_description_content_type = text/x-rst
 name = galaxy-test-api
 url = https://github.com/galaxyproject/galaxy
-version = 23.1.dev0
+version = 23.2.dev0
 
 [options]
 include_package_data = True

packages/test_base/HISTORY.rst

@@ -4,11 +4,10 @@ History
 .. to_doc
 
 ---------
-23.3.dev0
+24.0.dev0
 ---------
 
 
-
 -------------------
 23.1.4 (2024-01-04)
 -------------------
@@ -41,8 +40,6 @@ Bug fixes
 Bug fixes
 =========
 
-* 
-* 
 * Ensure session is request-scoped for legacy endpoints by `@jdavcs <https://github.com/jdavcs>`_ in `#16207 <https://github.com/galaxyproject/galaxy/pull/16207>`_
 
 ============
@@ -103,9 +100,6 @@ No recorded changes since last release
 Bug fixes
 =========
 
-* 
-* 
-* 
 * Ensure history export contains all expected datasets by `@davelopez <https://github.com/davelopez>`_ in `#16013 <https://github.com/galaxyproject/galaxy/pull/16013>`_
 * Fix extended metadata file size handling by `@mvdbeek <https://github.com/mvdbeek>`_ in `#16109 <https://github.com/galaxyproject/galaxy/pull/16109>`_
 

packages/test_base/setup.cfg

@@ -27,7 +27,7 @@ long_description = file: README.rst, HISTORY.rst
 long_description_content_type = text/x-rst
 name = galaxy-test-base
 url = https://github.com/galaxyproject/galaxy
-version = 23.1.dev0
+version = 23.2.dev0
 
 [options]
 include_package_data = True

packages/test_driver/HISTORY.rst

@@ -4,11 +4,10 @@ History
 .. to_doc
 
 ---------
-23.3.dev0
+24.0.dev0
 ---------
 
 
-
 -------------------
 23.1.4 (2024-01-04)
 -------------------
@@ -41,8 +40,6 @@ Bug fixes
 Bug fixes
 =========
 
-* 
-* 
 * Backport tool mem fixes by `@mvdbeek <https://github.com/mvdbeek>`_ in `#16601 <https://github.com/galaxyproject/galaxy/pull/16601>`_
 * Fix allowlist deserialization in file sources by `@mvdbeek <https://github.com/mvdbeek>`_ in `#16729 <https://github.com/galaxyproject/galaxy/pull/16729>`_
 

packages/test_driver/setup.cfg

@@ -27,7 +27,7 @@ long_description = file: README.rst, HISTORY.rst
 long_description_content_type = text/x-rst
 name = galaxy-test-driver
 url = https://github.com/galaxyproject/galaxy
-version = 23.1.dev0
+version = 23.2.dev0
 
 [options]
 include_package_data = True

packages/test_selenium/HISTORY.rst

@@ -3,9 +3,9 @@ History
 
 .. to_doc
 
----------------------
-22.5.0.dev0
----------------------
+---------
+23.2.dev0
+---------
 
 
 

packages/test_selenium/setup.cfg

@@ -27,7 +27,7 @@ long_description = file: README.rst, HISTORY.rst
 long_description_content_type = text/x-rst
 name = galaxy-test-selenium
 url = https://github.com/galaxyproject/galaxy
-version = 22.5.0.dev0
+version = 23.2.dev0
 
 [options]
 include_package_data = True

packages/tool_shed/HISTORY.rst

@@ -3,8 +3,8 @@ History
 
 .. to_doc
 
----------------------
-23.1.0.dev0
----------------------
+---------
+23.2.dev0
+---------
 
 * First release.

packages/tool_shed/setup.cfg

@@ -27,7 +27,7 @@ long_description = file: README.rst, HISTORY.rst
 long_description_content_type = text/x-rst
 name = galaxy-tool-shed
 url = https://github.com/galaxyproject/galaxy
-version = 23.1.0.dev0
+version = 23.2.dev0
 
 [options]
 include_package_data = True

packages/tool_util/HISTORY.rst

@@ -4,11 +4,10 @@ History
 .. to_doc
 
 ---------
-23.3.dev0
+24.0.dev0
 ---------
 
 
-
 -------------------
 23.1.4 (2024-01-04)
 -------------------
@@ -54,8 +53,6 @@ Enhancements
 Bug fixes
 =========
 
-* 
-* 
 * Fixes for two framework test tools by `@bernt-matthias <https://github.com/bernt-matthias>`_ in `#15483 <https://github.com/galaxyproject/galaxy/pull/15483>`_
 * add missing f for f-string by `@bernt-matthias <https://github.com/bernt-matthias>`_ in `#15584 <https://github.com/galaxyproject/galaxy/pull/15584>`_
 * Fix call to `docker_cached_container_description` by `@bernt-matthias <https://github.com/bernt-matthias>`_ in `#15598 <https://github.com/galaxyproject/galaxy/pull/15598>`_
@@ -77,8 +74,6 @@ Bug fixes
 Enhancements
 ============
 
-* 
-* 
 * Decompress history data for testing assertions by `@bernt-matthias <https://github.com/bernt-matthias>`_ in `#15085 <https://github.com/galaxyproject/galaxy/pull/15085>`_
 * OIDC tokens by `@SergeyYakubov <https://github.com/SergeyYakubov>`_ in `#15300 <https://github.com/galaxyproject/galaxy/pull/15300>`_
 * Fix for new style conda packages by `@bernt-matthias <https://github.com/bernt-matthias>`_ in `#15446 <https://github.com/galaxyproject/galaxy/pull/15446>`_
@@ -115,9 +110,6 @@ Other changes
 Bug fixes
 =========
 
-* 
-* 
-* 
 * Fixes for extra files handling and cached object stores  by `@mvdbeek <https://github.com/mvdbeek>`_ in `#16595 <https://github.com/galaxyproject/galaxy/pull/16595>`_
 * Fix create/install commands for conda 23.9.0 by `@nsoranzo <https://github.com/nsoranzo>`_ in `#16831 <https://github.com/galaxyproject/galaxy/pull/16831>`_
 
@@ -130,10 +122,6 @@ Bug fixes
 Bug fixes
 =========
 
-* 
-* 
-* 
-* 
 * Allow duplicate labels in linter if outputs contain filters  by `@bernt-matthias <https://github.com/bernt-matthias>`_ in `#15933 <https://github.com/galaxyproject/galaxy/pull/15933>`_
 * Fix parsing tool metadata from bio.tools by `@kysrpex <https://github.com/kysrpex>`_ in `#16449 <https://github.com/galaxyproject/galaxy/pull/16449>`_
 * Linter: fix regex for profile version by `@bernt-matthias <https://github.com/bernt-matthias>`_ in `#16480 <https://github.com/galaxyproject/galaxy/pull/16480>`_
@@ -154,11 +142,6 @@ No recorded changes since last release
 Bug fixes
 =========
 
-* 
-* 
-* 
-* 
-* 
 * xsd: add missing `sep` attribute for `has_n_columns` by `@bernt-matthias <https://github.com/bernt-matthias>`_ in `#16262 <https://github.com/galaxyproject/galaxy/pull/16262>`_
 * Missing init prevents models.py being bundled into tool_util by `@nuwang <https://github.com/nuwang>`_ in `#16308 <https://github.com/galaxyproject/galaxy/pull/16308>`_
 
@@ -166,9 +149,6 @@ Bug fixes
 Enhancements
 ============
 
-* 
-* 
-* 
 * When importing tool data bundles, use the first loc file for the matching table by `@natefoo <https://github.com/natefoo>`_ in `#16247 <https://github.com/galaxyproject/galaxy/pull/16247>`_
 
 -------------------
@@ -180,13 +160,6 @@ Enhancements
 Bug fixes
 =========
 
-* 
-* 
-* 
-* 
-* 
-* 
-* 
 * Don't fail CWL tool parsing when Cheetah not installed by `@mvdbeek <https://github.com/mvdbeek>`_ in `#16219 <https://github.com/galaxyproject/galaxy/pull/16219>`_
 * Allow skipping ``expect_num_outputs`` when ``expect_failure`` is set in tool test by `@bernt-matthias <https://github.com/bernt-matthias>`_ in `#16237 <https://github.com/galaxyproject/galaxy/pull/16237>`_
 
@@ -199,14 +172,6 @@ Bug fixes
 Bug fixes
 =========
 
-* 
-* 
-* 
-* 
-* 
-* 
-* 
-* 
 * Fix assertion linting to not fail on byte suffixes by `@bernt-matthias <https://github.com/bernt-matthias>`_ in `#15873 <https://github.com/galaxyproject/galaxy/pull/15873>`_
 * Fix ``get_test_from_anaconda()`` and ``base_image_for_targets()`` functions by `@nsoranzo <https://github.com/nsoranzo>`_ in `#16125 <https://github.com/galaxyproject/galaxy/pull/16125>`_
 * Fix test search for mulled container hashes by `@mvdbeek <https://github.com/mvdbeek>`_ in `#16170 <https://github.com/galaxyproject/galaxy/pull/16170>`_
@@ -215,13 +180,6 @@ Bug fixes
 Enhancements
 ============
 
-* 
-* 
-* 
-* 
-* 
-* 
-* 
 * Allow setting auto_decompress property in staging interface by `@mvdbeek <https://github.com/mvdbeek>`_ in `#16014 <https://github.com/galaxyproject/galaxy/pull/16014>`_
 
 -------------------

packages/tool_util/setup.cfg

@@ -28,7 +28,7 @@ long_description = file: README.rst, HISTORY.rst
 long_description_content_type = text/x-rst
 name = galaxy-tool-util
 url = https://github.com/galaxyproject/galaxy
-version = 23.1.dev0
+version = 23.2.dev0
 
 [options]
 include_package_data = True

packages/tours/HISTORY.rst

@@ -4,11 +4,10 @@ History
 .. to_doc
 
 ---------
-23.3.dev0
+24.0.dev0
 ---------
 
 
-
 -------------------
 23.1.4 (2024-01-04)
 -------------------

packages/tours/setup.cfg

@@ -27,7 +27,7 @@ long_description = file: README.rst, HISTORY.rst
 long_description_content_type = text/x-rst
 name = galaxy-tours
 url = https://github.com/galaxyproject/galaxy
-version = 23.1.dev0
+version = 23.2.dev0
 
 [options]
 include_package_data = True

packages/util/HISTORY.rst

@@ -4,11 +4,10 @@ History
 .. to_doc
 
 ---------
-23.3.dev0
+24.0.dev0
 ---------
 
 
-
 -------------------
 23.1.4 (2024-01-04)
 -------------------
@@ -55,8 +54,6 @@ Bug fixes
 Enhancements
 ============
 
-* 
-* 
 * Various Tool Shed Cleanup by `@jmchilton <https://github.com/jmchilton>`_ in `#15247 <https://github.com/galaxyproject/galaxy/pull/15247>`_
 * Protection against problematic boolean parameters. by `@jmchilton <https://github.com/jmchilton>`_ in `#15493 <https://github.com/galaxyproject/galaxy/pull/15493>`_
 * Unify url handling with filesources by `@nuwang <https://github.com/nuwang>`_ in `#15497 <https://github.com/galaxyproject/galaxy/pull/15497>`_
@@ -108,9 +105,6 @@ No recorded changes since last release
 Bug fixes
 =========
 
-* 
-* 
-* 
 * Replace httpbin service with pytest-httpserver by `@mvdbeek <https://github.com/mvdbeek>`_ in `#16042 <https://github.com/galaxyproject/galaxy/pull/16042>`_
 
 -------------------

packages/util/setup.cfg

@@ -28,7 +28,7 @@ long_description = file: README.rst, HISTORY.rst
 long_description_content_type = text/x-rst
 name = galaxy-util
 url = https://github.com/galaxyproject/galaxy
-version = 23.1.dev0
+version = 23.2.dev0
 
 [options]
 include_package_data = True

packages/util/test-requirements.txt

@@ -1,3 +1,4 @@
 pytest
 pytest-httpserver
 responses
+Werkzeug

packages/web_apps/HISTORY.rst

@@ -4,11 +4,10 @@ History
 .. to_doc
 
 ---------
-23.3.dev0
+24.0.dev0
 ---------
 
 
-
 -------------------
 23.1.4 (2024-01-04)
 -------------------
@@ -40,7 +39,6 @@ Bug fixes
 Bug fixes
 =========
 
-* 
 * Provide error message instead of internal server error by `@mvdbeek <https://github.com/mvdbeek>`_ in `#16905 <https://github.com/galaxyproject/galaxy/pull/16905>`_
 * Fix input dates in notifications: consider timezone offset by `@davelopez <https://github.com/davelopez>`_ in `#17088 <https://github.com/galaxyproject/galaxy/pull/17088>`_
 
@@ -59,8 +57,6 @@ Enhancements
 Bug fixes
 =========
 
-* 
-* 
 * Create ToolSuccess route and refactor component by `@ahmedhamidawan <https://github.com/ahmedhamidawan>`_ in `#15484 <https://github.com/galaxyproject/galaxy/pull/15484>`_
 * fix premature return in user API by `@martenson <https://github.com/martenson>`_ in `#15781 <https://github.com/galaxyproject/galaxy/pull/15781>`_
 * Ensure session is request-scoped for legacy endpoints by `@jdavcs <https://github.com/jdavcs>`_ in `#16207 <https://github.com/galaxyproject/galaxy/pull/16207>`_
@@ -81,8 +77,6 @@ Bug fixes
 Enhancements
 ============
 
-* 
-* 
 * Empower Users to Select Storage Destination by `@jmchilton <https://github.com/jmchilton>`_ in `#14073 <https://github.com/galaxyproject/galaxy/pull/14073>`_
 * Add Storage Dashboard visualizations for histories by `@davelopez <https://github.com/davelopez>`_ in `#14820 <https://github.com/galaxyproject/galaxy/pull/14820>`_
 * External Login Flow: Redirect users if account already exists by `@ahmedhamidawan <https://github.com/ahmedhamidawan>`_ in `#15019 <https://github.com/galaxyproject/galaxy/pull/15019>`_
@@ -140,9 +134,6 @@ Other changes
 Bug fixes
 =========
 
-* 
-* 
-* 
 * Fix incorrect ASGI request host by `@davelopez <https://github.com/davelopez>`_ in `#16574 <https://github.com/galaxyproject/galaxy/pull/16574>`_
 * Allow the legacy DELETE dataset endpoint to accept any string for the history_id by `@assuntad23 <https://github.com/assuntad23>`_ in `#16593 <https://github.com/galaxyproject/galaxy/pull/16593>`_
 
@@ -155,10 +146,6 @@ Bug fixes
 Bug fixes
 =========
 
-* 
-* 
-* 
-* 
 * Fix active step display in workflow editor side panel by `@mvdbeek <https://github.com/mvdbeek>`_ in `#16364 <https://github.com/galaxyproject/galaxy/pull/16364>`_
 
 -------------------
@@ -170,11 +157,6 @@ Bug fixes
 Bug fixes
 =========
 
-* 
-* 
-* 
-* 
-* 
 * Fix folder access for anonymous user by `@mvdbeek <https://github.com/mvdbeek>`_ in `#16330 <https://github.com/galaxyproject/galaxy/pull/16330>`_
 
 -------------------
@@ -186,21 +168,12 @@ Bug fixes
 Bug fixes
 =========
 
-* 
-* 
-* 
-* 
-* 
-* 
 * Fix converting Enum value to str for Python 3.11 by `@nsoranzo <https://github.com/nsoranzo>`_ in `#16284 <https://github.com/galaxyproject/galaxy/pull/16284>`_
 
 ============
 Enhancements
 ============
 
-* 
-* 
-* 
 * When importing tool data bundles, use the first loc file for the matching table by `@natefoo <https://github.com/natefoo>`_ in `#16247 <https://github.com/galaxyproject/galaxy/pull/16247>`_
 
 -------------------
@@ -218,13 +191,6 @@ No recorded changes since last release
 Bug fixes
 =========
 
-* 
-* 
-* 
-* 
-* 
-* 
-* 
 * Display DCE in job parameter component, allow rerunning with DCE input by `@mvdbeek <https://github.com/mvdbeek>`_ in `#15744 <https://github.com/galaxyproject/galaxy/pull/15744>`_
 * Various fixes to path prefix handling by `@mvdbeek <https://github.com/mvdbeek>`_ in `#16033 <https://github.com/galaxyproject/galaxy/pull/16033>`_
 * Fix dataype_change not updating HDCA update_time by `@mvdbeek <https://github.com/mvdbeek>`_ in `#16099 <https://github.com/galaxyproject/galaxy/pull/16099>`_

packages/web_apps/setup.cfg

@@ -27,7 +27,7 @@ long_description = file: README.rst, HISTORY.rst
 long_description_content_type = text/x-rst
 name = galaxy-web-apps
 url = https://github.com/galaxyproject/galaxy
-version = 23.1.dev0
+version = 23.2.dev0
 
 [options]
 include_package_data = True

packages/web_framework/HISTORY.rst

@@ -4,11 +4,10 @@ History
 .. to_doc
 
 ---------
-23.3.dev0
+24.0.dev0
 ---------
 
 
-
 -------------------
 23.1.4 (2024-01-04)
 -------------------
@@ -47,8 +46,6 @@ Enhancements
 Bug fixes
 =========
 
-* 
-* 
 * Fix some drs handling issues by `@nuwang <https://github.com/nuwang>`_ in `#15777 <https://github.com/galaxyproject/galaxy/pull/15777>`_
 * Ensure session is request-scoped for legacy endpoints by `@jdavcs <https://github.com/jdavcs>`_ in `#16207 <https://github.com/galaxyproject/galaxy/pull/16207>`_
 
@@ -56,8 +53,6 @@ Bug fixes
 Enhancements
 ============
 
-* 
-* 
 * Update Python dependencies by `@galaxybot <https://github.com/galaxybot>`_ in `#15435 <https://github.com/galaxyproject/galaxy/pull/15435>`_
 * Don't error on missing parameters or unused parameters in UI controllers by `@mvdbeek <https://github.com/mvdbeek>`_ in `#16246 <https://github.com/galaxyproject/galaxy/pull/16246>`_
 
@@ -70,9 +65,6 @@ Enhancements
 Bug fixes
 =========
 
-* 
-* 
-* 
 * Don't read request body into memory by `@mvdbeek <https://github.com/mvdbeek>`_ in `#16585 <https://github.com/galaxyproject/galaxy/pull/16585>`_
 
 -------------------
@@ -84,10 +76,6 @@ Bug fixes
 Bug fixes
 =========
 
-* 
-* 
-* 
-* 
 * Media player fix issue 16415 by `@bdwheele <https://github.com/bdwheele>`_ in `#16443 <https://github.com/galaxyproject/galaxy/pull/16443>`_
 * Fix static file serving for ``robots.txt`` and ``favicon.ico`` when using per_host settings by `@mira-miracoli <https://github.com/mira-miracoli>`_ in `#16459 <https://github.com/galaxyproject/galaxy/pull/16459>`_
 
@@ -118,11 +106,6 @@ No recorded changes since last release
 Bug fixes
 =========
 
-* 
-* 
-* 
-* 
-* 
 * Various fixes to path prefix handling by `@mvdbeek <https://github.com/mvdbeek>`_ in `#16033 <https://github.com/galaxyproject/galaxy/pull/16033>`_
 
 -------------------

packages/web_framework/setup.cfg

@@ -27,7 +27,7 @@ long_description = file: README.rst, HISTORY.rst
 long_description_content_type = text/x-rst
 name = galaxy-web-framework
 url = https://github.com/galaxyproject/galaxy
-version = 23.1.dev0
+version = 23.2.dev0
 
 [options]
 include_package_data = True

packages/web_stack/HISTORY.rst

@@ -4,11 +4,10 @@ History
 .. to_doc
 
 ---------
-23.3.dev0
+24.0.dev0
 ---------
 
 
-
 -------------------
 23.1.4 (2024-01-04)
 -------------------
@@ -67,9 +66,6 @@ No recorded changes since last release
 Bug fixes
 =========
 
-* 
-* 
-* 
 * Don't attempt to call a bool when using mem-self handler assignment. by `@natefoo <https://github.com/natefoo>`_ in `#16359 <https://github.com/galaxyproject/galaxy/pull/16359>`_
 
 -------------------

packages/web_stack/setup.cfg

@@ -27,7 +27,7 @@ long_description = file: README.rst, HISTORY.rst
 long_description_content_type = text/x-rst
 name = galaxy-web-stack
 url = https://github.com/galaxyproject/galaxy
-version = 23.1.dev0
+version = 23.2.dev0
 
 [options]
 include_package_data = True

pyproject.toml

@@ -163,6 +163,7 @@ testfixtures = "*"
 tuspy = "*"
 twill = ">=3.2.1"  # https://github.com/twill-tools/twill/issues/18
 watchdog = "*"
+Werkzeug = "*"
 
 [tool.poetry.group.typecheck.dependencies]
 mypy = "*"