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Use the provided use_fabric parameter in handle_command.

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This commit is contained in:
Dave Bouvier
2014-02-20 16:00:21 -05:00
parent db55ca3bc2
commit ac2d39eb90
1 changed files with 5 additions and 1 deletions
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lib/tool_shed/galaxy_install/tool_dependencies/fabric_util.py
+5 -1
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@@ -206,7 +206,11 @@ def handle_action_shell_file_paths( env_file_builder, action_dict ):
def handle_command( app, tool_dependency, install_dir, cmd, return_output=False, use_fabric=False ):
context = app.install_model.context
output = run_local_command( cmd, capture_output=True, stream_output=True )
if use_fabric:
with settings( warn_only=True ):
output = local( cmd, capture=True )
else:
output = run_local_command( cmd, capture_output=True, stream_output=True )
log_results( cmd, output, os.path.join( install_dir, INSTALLATION_LOG ) )
if output.return_code:
tool_dependency.status = app.install_model.ToolDependency.installation_status.ERROR