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Merge pull request #868 from jmchilton/release_notes
[15.10] Release notes
This commit is contained in:
Martin Cech
@@ -0,0 +1,641 @@
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.. to_doc
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-------------------------------
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15.10
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-------------------------------
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Enhancements
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-------------------------------
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.. enhancements
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* Greatly enhance the reports application - including improved styling,
|
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new landing page, pagination, and sparklines. Huge thanks to
|
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`@Airistotal <https://github.com/Airistotal>`__.
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`Pull Request 370`_, `Pull Request 410`_, `Pull Request 609`_,
|
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`Pull Request 472`_, `Pull Request 576`_, `Pull Request 678`_
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`Pull Request 675`_, `Pull Request 584`_
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* Enhanced upload tool - with support for composite types and
|
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improved styling.
|
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`Pull Request 605`_, `Pull Request 620`_, `Pull Request 577`_,
|
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`Pull Request 628`_
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* Improved API and UI for data libraries - including new support for library
|
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folder management and search.
|
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`Pull Request 806`_, `Pull Request 820`_
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* Expose more history panel options for collection datasets.
|
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`Pull Request 854`_
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* Improve UI encapsulation for panel rendering, iframes and tool forms.
|
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`Pull Request 706`_, `Pull Request 739`_, `Pull Request 786`_
|
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* Implement whitelist for tools that generate HTML.
|
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`Pull Request 510`_
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* Add ``regex_replace`` tool dependency install action.
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`Pull Request 457`_
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* Document Galaxy interactive environments (GIEs).
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(Thanks to `@erasche <https://github.com/erasche>`__.)
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`Pull Request 803`_
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* Explicit project procedure language on reversions and WIP. (Thanks to `@erasche
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<https://github.com/erasche>`__.)
|
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`Pull Request 556`_
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* Readme improvemenets - GitHub issues, security email contact and CI testing
|
||||
(Thanks to `@nsoranzo <https://github.com/nsoranzo>`__.)
|
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`Pull Request 574`_
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* Remove history controller methods.
|
||||
`Pull Request 578`_
|
||||
* Remove older references to get_disk_size and associated methods in histories code.
|
||||
`Pull Request 582`_
|
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* Cleanup of the Tool Shed's url handling methods.
|
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`Pull Request 586`_
|
||||
* Remove old cloudlaunch in favor of new
|
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`web application <https://github.com/galaxyproject/cloudlaunch>`__.
|
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`Pull Request 597`_
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* Enable a Grunt develop mode.
|
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`Pull Request 601`_
|
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* Allow tools to explicitly produce nested collections.
|
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`Pull Request 538`_
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* Update output actions code for some collection operations.
|
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`Pull Request 544`_
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* Allow ``discover_datasets`` tag to use ``format`` attribute (instead of ``ext``).
|
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`Pull Request 764`_
|
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* Implement ``min`` and ``max`` attributes for multiple data input parameters.
|
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`Pull Request 765`_
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* Style fixes a test fixes for all tool shed code. (Thanks to
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`@nsoranzo <https://github.com/nsoranzo>`__.)
|
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`Pull Request 650`_
|
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* Style fixes for ``lib/galaxy_utils/``. (Thanks to `@nsoranzo
|
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<https://github.com/nsoranzo>`__.)
|
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`Pull Request 604`_
|
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* Style fixes for ``test/``. (Thanks to `@nsoranzo
|
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<https://github.com/nsoranzo>`__.)
|
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`Pull Request 653`_
|
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* Style fixes for ``contrib/`` and ``lib/tool_shed/``. (Thanks to `@nsoranzo
|
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<https://github.com/nsoranzo>`__.)
|
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`Pull Request 708`_
|
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* Style fixes violated when merging from ``release_15.07``. (Thanks to `@nsoranzo
|
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<https://github.com/nsoranzo>`__.)
|
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`Pull Request 688`_
|
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* Style fixes for tool shed database migrations. (Thanks to
|
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`@nsoranzo <https://github.com/nsoranzo>`__.)
|
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`Pull Request 770`_
|
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* Changed refresh time on reports homepage (Thanks to `@Airistotal
|
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<https://github.com/Airistotal>`__.)
|
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`Pull Request 609`_
|
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* Remove unused ``fastx_clipper_sequences.txt`` file.
|
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(Thanks to `@lparsons <https://github.com/lparsons>`__.)
|
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`Pull Request 611`_
|
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* Move ``manual_builds.txt`` to ``manual_builds.txt.sample``.
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(Thanks to `@lparsons <https://github.com/lparsons>`__.)
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`Pull Request 612`_
|
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* Expose tool shed version through API.
|
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`Pull Request 613`_
|
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* Improvements to history API allowing fetching of histories shared with given user.
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`Pull Request 614`_
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* Allow deserializing dataset permissions via the API.
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`Pull Request 640`_, `Pull Request 496`_
|
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* Merge nearly-identical methods in ``shed_util_common`` module.
|
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`Pull Request 651`_
|
||||
* Expose tool config file path to admins via the API.
|
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`Pull Request 652`_
|
||||
* Add Galaxy developer documentation section to docs.
|
||||
(Thanks to `@erasche <https://github.com/erasche>`__.)
|
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`Pull Request 654`_
|
||||
* Password reset improvements.
|
||||
`Pull Request 655`_
|
||||
* Allow accessing repeat and conditional elements in workflow post job action
|
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parameters.
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`Pull Request 662`_
|
||||
* Use new path variable syntax available since Routes 1.9.
|
||||
(Thanks to `@nsoranzo <https://github.com/nsoranzo>`__.)
|
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`Pull Request 665`_
|
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* Lazy-load histories into multi-history view.
|
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`Pull Request 676`_
|
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* Use standard Galaxy message box styles on tool help texts that use rST
|
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admonitions.
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`Pull Request 685`_
|
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* Set a default value for copy history dialog radio input (to copy *all*).
|
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`Pull Request 693`_
|
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* Remove various code duplication.
|
||||
(Thanks to `@erasche <https://github.com/erasche>`__.)
|
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`Pull Request 694`_
|
||||
* Use ``setup.py`` for Python all installations during dependency installation.
|
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(Thanks to `@bgruening <https://github.com/bgruening>`__.)
|
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`Pull Request 698`_
|
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* Reorganize procedures documentation content. (Thanks to `@nsoranzo <https://github.com/nsoranzo>`__.)
|
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`Pull Request 702`_
|
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* Upgrade sqlalchemy to 1.0.8.
|
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`Pull Request 709`_
|
||||
* Enhance GenomeSpace tools to report the GS tool name.
|
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`Pull Request 711`_
|
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* Add Oxli datatypes. (Thanks to `@dib-lab <https://github.com/dib-lab>`__.)
|
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`Pull Request 721`_
|
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* Extend root controller to allow specifying a history id.
|
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`Pull Request 725`_
|
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* Fix multi-history copy/new to set the history as current.
|
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`Pull Request 727`_
|
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* Fix workflow post job actions when rerunning a job.
|
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`Pull Request 730`_
|
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* Trigger iframe event for history.
|
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`Pull Request 732`_
|
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* Add testing environment variable GALAXY_TEST_LOGGING_CONFIG.
|
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`Pull Request 738`_
|
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* Do not explicitly require pexpect Python dependency.
|
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`Pull Request 741`_
|
||||
* API and UI enhancements for history copying.
|
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`Pull Request 742`_
|
||||
* Remove deprecated objectstore options from sample documentation.
|
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`Pull Request 748`_
|
||||
* Improved jobs API documentation.
|
||||
`Pull Request 751`_
|
||||
* Improved state tracking of collections in history panel.
|
||||
`Pull Request 755`_, `Pull Request 819`_
|
||||
* Updates and fixes for dockerized Galaxy testing.
|
||||
`Pull Request 759`_
|
||||
* When submitting tool error reports, include 'old' tool id as part of subject
|
||||
line.
|
||||
`Pull Request 761`_
|
||||
* Eliminate use of bare exceptions from code.
|
||||
`Pull Request 763`_
|
||||
* Add encoded IDs to job error reports and also include a link to show_params
|
||||
`Pull Request 771`_
|
||||
* In log of collecting job metrics, print id of has_metrics object
|
||||
`Pull Request 772`_
|
||||
* Add docker command wrapper. (Thanks to `@scholtalbers
|
||||
<https://github.com/scholtalbers>`__.)
|
||||
`Pull Request 777`_
|
||||
* Unify the docker command, command_inject, and command_wrapper (Thanks to
|
||||
`@erasche <https://github.com/erasche>`__.)
|
||||
`Pull Request 782`_
|
||||
* Test case to prevent regression of `#753
|
||||
<https://github.com/galaxyproject/galaxy/issues/753>`__.
|
||||
`Pull Request 784`_
|
||||
* Refactor interactive environment launching to use Docker's ``-P`` option.
|
||||
(Thanks to `@erasche <https://github.com/erasche>`__.)
|
||||
`Pull Request 790`_
|
||||
* Print ``has_metrics`` class name instead of object memory address. (Thanks to
|
||||
`@nsoranzo <https://github.com/nsoranzo>`__.)
|
||||
`Pull Request 791`_
|
||||
* Improved state tracking of datasets in the history panel.
|
||||
`Pull Request 793`_
|
||||
* Add sentry configuration option and doc to ``galaxy.ini.sample``.
|
||||
`Pull Request 799`_
|
||||
* Small tweaks to tool loading.
|
||||
`Pull Request 813`_
|
||||
* Implment request timing middleware via statsd.
|
||||
`Pull Request 821`_
|
||||
* Various small ``run_tests.sh`` fixes/enhancements.
|
||||
`Pull Request 825`_
|
||||
* Remove test broken after `#786
|
||||
<https://github.com/galaxyproject/galaxy/issues/786>`__. (Thanks to
|
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`@nsoranzo <https://github.com/nsoranzo>`__.)
|
||||
`Pull Request 828`_
|
||||
* Improved file handling in local runner.
|
||||
`Pull Request 830`_
|
||||
* Swap debug mode to be off by default in ``galaxy.ini.sample``.
|
||||
`Pull Request 840`_
|
||||
* Update documentation for the gff_filter_by_attribute tool (Thanks to
|
||||
`@bgruening <https://github.com/bgruening>`__.)
|
||||
`Pull Request 842`_
|
||||
* Allow reuse of parent ``/tmp`` directory in dockerized testing.
|
||||
`Pull Request 843`_
|
||||
* More small adjustments to test script ``run_tests.sh``.
|
||||
`Pull Request 844`_
|
||||
* UCSC tool cleanup - remove unused, deprecated code and add citations to existing tools.
|
||||
`Pull Request 846`_
|
||||
* Add more distribution tool citations.
|
||||
`Pull Request 847`_
|
||||
* Remove unused ``echo`` tool
|
||||
`Pull Request 848`_
|
||||
* Update interactive environments for this release. (Thanks to `@erasche <https://github.com/erasche>`__.)
|
||||
`Pull Request 849`_
|
||||
* Enhancements for IPython interactive environment allowing it run in certain
|
||||
deployments.
|
||||
(Thanks to `@scholtalbers <https://github.com/scholtalbers>`__.)
|
||||
`Pull Request 462`_
|
||||
* Update style tools ``grunt-contrib-less``, ``grunt-spritesmith``.
|
||||
`Pull Request 473`_
|
||||
* Preserve tags and annotations when copying datasets between histories.
|
||||
`Pull Request 482`_
|
||||
* Implement grunt task for compiling handlerbars templates.
|
||||
`Pull Request 484`_
|
||||
* Improve shortcut logic in Python job code.
|
||||
`Pull Request 488`_
|
||||
* Do not render dataset selector when there are no datasets to select in history.
|
||||
`Pull Request 491`_
|
||||
* Clean up the formatting on mapping.py
|
||||
`Pull Request 492`_
|
||||
* Allow interactive environments to have their own static base url.
|
||||
`Pull Request 500`_
|
||||
* Improve history dataset manager testing to verify set order of tags.
|
||||
`Pull Request 493`_
|
||||
* Enhance directory handling for tool shed installations.
|
||||
(Thanks to `@gregvonkuster <https://github.com/gregvonkuster>`__.)
|
||||
`Pull Request 511`_
|
||||
* Improved tag handling for anonymous users.
|
||||
`Pull Request 516`_
|
||||
* Allow uninstalling multiple toolshed repositories at once.
|
||||
`Pull Request 517`_
|
||||
* Allow the user to add the dataset for Trackster visualization to and existing
|
||||
visualization.
|
||||
`Pull Request 526`_
|
||||
* Tool ``extract_genomic_dna`` tool to support for 2bit files from local data.
|
||||
(Thanks to `@yhoogstrate <https://github.com/yhoogstrate>`__.)
|
||||
`Pull Request 529`_
|
||||
* Remove unused serializer ``_get_history_data``.
|
||||
`Pull Request 530`_
|
||||
* Render ``nice_size`` on the client.
|
||||
`Pull Request 532`_
|
||||
* Swap ``track_jobs_in_database`` to be ``True`` by default.
|
||||
`Pull Request 533`_
|
||||
* Update client libs: farbtastic, jqtouch, bib2json
|
||||
`Pull Request 536`_
|
||||
* Standardize ``nice_size()`` import.
|
||||
(Thanks to `@nsoranzo <https://github.com/nsoranzo>`__.)
|
||||
`Pull Request 537`_
|
||||
* Remove older, unused history CSS rules.
|
||||
`Pull Request 539`_
|
||||
* Allow ordering of the history index list using an ``order`` query parameter.
|
||||
`Pull Request 540`_
|
||||
* Improve job config error message when no handler elements are defined.
|
||||
`Pull Request 543`_
|
||||
* Allow use of History ``disk_size`` as a column in queries.
|
||||
`Pull Request 550`_
|
||||
* Implement API for dealing with converted datasets.
|
||||
`Pull Request 553`_
|
||||
* Include tool shed API information in Galaxy's documentation.
|
||||
`Pull Request 569`_
|
||||
* Stop creating unneeded ``database/message.mako.py`` file.
|
||||
`Pull Request 575`_
|
||||
* Page Saved Histories at 10 histories.
|
||||
`Pull Request 581`_
|
||||
* Remove older references to ``get_disk_size`` and associated methods.
|
||||
`Pull Request 582`_
|
||||
* Remove osme unused files in ``/static``.
|
||||
`Pull Request 583`_
|
||||
* Minor cleanup of some Python iterator usages.
|
||||
`Pull Request 589`_
|
||||
* Minor tool shed code style cleanup.
|
||||
`Pull Request 591`_
|
||||
* Include ``valid_tools`` as part of metadata returned with the repository
|
||||
install information.
|
||||
`Pull Request 592`_
|
||||
* New API for published histories.
|
||||
`Pull Request 594`_
|
||||
|
||||
|
||||
|
||||
Fixes
|
||||
-------------------------------
|
||||
|
||||
|
||||
.. fixes
|
||||
|
||||
* Fix batch mode input in new tool form UI.
|
||||
(Thanks to `@ericenns <https://github.com/ericenns>`__.)
|
||||
`Pull Request 568`_
|
||||
* Tool lineage fixes.
|
||||
(Thanks to `@nsoranzo <https://github.com/nsoranzo>`__.)
|
||||
`Pull Request 596`_
|
||||
* Fix bug in reload API where id wasn't recognised.
|
||||
(Thanks to `@erasche <https://github.com/erasche>`__.)
|
||||
`Pull Request 619`_
|
||||
* Correct typo in tool shed action handler code.
|
||||
(Thanks to `@erasche <https://github.com/erasche>`__.)
|
||||
`Pull Request 561`_
|
||||
* Small fixes for UI functional tests.
|
||||
`Pull Request 485`_, `Pull Request 487`_
|
||||
* Bug fixes related style adjustments.
|
||||
(Thanks in part to `@nsoranzo <https://github.com/nsoranzo>`__.)
|
||||
`Pull Request 478`_, `Pull Request 479`_, `Pull Request 480`_, `Pull Request 481`_
|
||||
* Fixes to make Sweepster functional.
|
||||
`Pull Request 486`_
|
||||
* Add client to ignore so that tox locally doesn't try to test JavaScript.
|
||||
`Pull Request 494`_
|
||||
* Fix for server error when installing certain repositories.
|
||||
`Pull Request 495`_
|
||||
* Fix BBI data provider underflow bug when computing standard deviation.
|
||||
`Pull Request 499`_
|
||||
* Add numpad support to integer inputs.
|
||||
`Pull Request 509`_
|
||||
* Fix for ``rdata`` datatype.
|
||||
`Pull Request 512`_
|
||||
* Fix for toolshed escape method, where an error/log message contains non-
|
||||
ASCII characters.
|
||||
`Pull Request 514`_
|
||||
* Restore line wrongly removed in fa7c5c5 and again in 9805294 .
|
||||
(Thanks to `@nsoranzo <https://github.com/nsoranzo>`__.)
|
||||
`Pull Request 515`_
|
||||
* Ensure file exists before attempting ``chmod`` in tool shed install code.
|
||||
`Pull Request 545`_
|
||||
* Filter deleted library datasets when using the library data parameter.
|
||||
`Pull Request 546`_
|
||||
* Correct examples in workflow invocation documentation.
|
||||
`Pull Request 565`_
|
||||
* Fix the CSS class for reports brand.
|
||||
`Pull Request 585`_
|
||||
* Retab ``.loc.sample`` files.
|
||||
`Pull Request 587`_
|
||||
* ``liftOver.loc`` was not accessible in local data
|
||||
(Thanks to `@yhoogstrate <https://github.com/yhoogstrate>`__.)
|
||||
`Pull Request 588`_
|
||||
* Ensure removal of temporary tool shed files.
|
||||
`Pull Request 607`_
|
||||
* Bug fix in Reports
|
||||
(Thanks to `@Airistotal <https://github.com/Airistotal>`__.)
|
||||
`Pull Request 626`_
|
||||
* Cleaner commit history for `#629
|
||||
<https://github.com/galaxyproject/galaxy/issues/629>`__ and array syntax for
|
||||
pathspec
|
||||
(Thanks to `@chambm <https://github.com/chambm>`__.)
|
||||
`Pull Request 632`_
|
||||
* add missing js build
|
||||
`Pull Request 648`_
|
||||
* Reports - Small bug fixes
|
||||
(Thanks to `@Airistotal <https://github.com/Airistotal>`__.)
|
||||
`Pull Request 656`_
|
||||
* Fix tool image paths
|
||||
`Pull Request 660`_
|
||||
* remove reports style that affected the whole application
|
||||
`Pull Request 661`_
|
||||
* Fix centering bug in firefox
|
||||
(Thanks to `@Airistotal <https://github.com/Airistotal>`__.)
|
||||
`Pull Request 669`_
|
||||
* Don't overwrite $R_LIBS path during installation.
|
||||
(Thanks to `@bgruening <https://github.com/bgruening>`__.)
|
||||
`Pull Request 671`_
|
||||
* Fix tool shed installation issue
|
||||
(`#525 <https://github.com/galaxyproject/galaxy/issues/525>`__).
|
||||
(Thanks to `@mvdbeek <https://github.com/mvdbeek>`__.)
|
||||
`Pull Request 681`_
|
||||
* Return copied collection from manager copy method.
|
||||
`Pull Request 682`_
|
||||
* Fix multi-history fetch flag to allow re-fetching after collection sort.
|
||||
`Pull Request 695`_
|
||||
* Small fixes for LDAP auth.
|
||||
(Thanks to `@nsoranzo <https://github.com/nsoranzo>`__.)
|
||||
`Pull Request 696`_
|
||||
* Fix regression introduced in tool shed code this cycle.
|
||||
(Thanks to `@nsoranzo <https://github.com/nsoranzo>`__.)
|
||||
`Pull Request 701`_
|
||||
* Fix workflow editor post job action argument display.
|
||||
`Pull Request 703`_
|
||||
* Fix to get custom tabular datatypes.
|
||||
(Thanks to `@richard-burhans <https://github.com/richard-burhans>`__.)
|
||||
`Pull Request 705`_
|
||||
* Fix for logging in using OpenID when the OpenID isn't associated.
|
||||
`Pull Request 712`_
|
||||
* Misc fixes.
|
||||
(Thanks to `@nsoranzo <https://github.com/nsoranzo>`__.)
|
||||
`Pull Request 720`_
|
||||
* Fix history option flags.
|
||||
`Pull Request 726`_
|
||||
* Fix ``Galaxy.user`` in client code to be available when not using a require.
|
||||
`Pull Request 728`_
|
||||
* Remove no-op ``__init__`` methods from ``lib/galaxy/datatypes/binary.py``.
|
||||
(Thanks to `@mr-c <https://github.com/mr-c>`__.)
|
||||
`Pull Request 729`_
|
||||
* Fix more API tests.
|
||||
(Thanks to `@nsoranzo <https://github.com/nsoranzo>`__.)
|
||||
`Pull Request 731`_
|
||||
* Fixes for framework test cases.
|
||||
(Thanks to `@nsoranzo <https://github.com/nsoranzo>`__.)
|
||||
`Pull Request 752`_, `Pull Request 757`_
|
||||
* Bugfix in test error reporting handling code.
|
||||
`Pull Request 760`_
|
||||
* Tool form error messages and rerun fixes.
|
||||
`Pull Request 766`_
|
||||
* Quote value to fix configparser error in interactive environments.
|
||||
(Thanks to `@erasche <https://github.com/erasche>`__.)
|
||||
`Pull Request 775`_
|
||||
* Fix upload event binding.
|
||||
`Pull Request 778`_
|
||||
* Fix ``_JAVA_OPTIONS`` example in ``job_conf.xml.sample_advanced``.
|
||||
`Pull Request 796`_
|
||||
* Fix errors when starting ``./run_tests.sh -with_framework_test_tools -api``.
|
||||
(Thanks to `@nsoranzo <https://github.com/nsoranzo>`__.)
|
||||
`Pull Request 800`_
|
||||
* Tweak password reset email template to truly be plain text.
|
||||
`Pull Request 812`_
|
||||
* Fix returned tuple from ``creating_job``.
|
||||
`Pull Request 817`_
|
||||
* Fix database initialization when ``galaxy.ini`` doesn't exist.
|
||||
`Pull Request 822`_
|
||||
* Fix default value for optional select fields.
|
||||
`Pull Request 826`_
|
||||
* Use dependency handling in ``lib/galaxy/datatypes/``.
|
||||
(Thanks to `@nsoranzo <https://github.com/nsoranzo>`__.)
|
||||
`Pull Request 838`_
|
||||
* Expose all API keys to admins under ``REMOTE_USER``.
|
||||
(Thanks to `@erasche <https://github.com/erasche>`__.)
|
||||
`Pull Request 873`_
|
||||
* Various fixes for data libraries.
|
||||
`Pull Request 878`_
|
||||
* Minor fixes to the history UI.
|
||||
`Pull Request 910`_
|
||||
* Fix command quoting and remove size from text input for Cut tool.
|
||||
`Pull Request 913`_
|
||||
|
||||
.. github_links
|
||||
.. _Pull Request 370: https://github.com/galaxyproject/galaxy/pull/370
|
||||
.. _Pull Request 410: https://github.com/galaxyproject/galaxy/pull/410
|
||||
.. _Pull Request 457: https://github.com/galaxyproject/galaxy/pull/457
|
||||
.. _Pull Request 462: https://github.com/galaxyproject/galaxy/pull/462
|
||||
.. _Pull Request 472: https://github.com/galaxyproject/galaxy/pull/472
|
||||
.. _Pull Request 473: https://github.com/galaxyproject/galaxy/pull/473
|
||||
.. _Pull Request 478: https://github.com/galaxyproject/galaxy/pull/478
|
||||
.. _Pull Request 479: https://github.com/galaxyproject/galaxy/pull/479
|
||||
.. _Pull Request 480: https://github.com/galaxyproject/galaxy/pull/480
|
||||
.. _Pull Request 481: https://github.com/galaxyproject/galaxy/pull/481
|
||||
.. _Pull Request 482: https://github.com/galaxyproject/galaxy/pull/482
|
||||
.. _Pull Request 484: https://github.com/galaxyproject/galaxy/pull/484
|
||||
.. _Pull Request 485: https://github.com/galaxyproject/galaxy/pull/485
|
||||
.. _Pull Request 486: https://github.com/galaxyproject/galaxy/pull/486
|
||||
.. _Pull Request 487: https://github.com/galaxyproject/galaxy/pull/487
|
||||
.. _Pull Request 488: https://github.com/galaxyproject/galaxy/pull/488
|
||||
.. _Pull Request 491: https://github.com/galaxyproject/galaxy/pull/491
|
||||
.. _Pull Request 492: https://github.com/galaxyproject/galaxy/pull/492
|
||||
.. _Pull Request 493: https://github.com/galaxyproject/galaxy/pull/493
|
||||
.. _Pull Request 494: https://github.com/galaxyproject/galaxy/pull/494
|
||||
.. _Pull Request 495: https://github.com/galaxyproject/galaxy/pull/495
|
||||
.. _Pull Request 496: https://github.com/galaxyproject/galaxy/pull/496
|
||||
.. _Pull Request 499: https://github.com/galaxyproject/galaxy/pull/499
|
||||
.. _Pull Request 500: https://github.com/galaxyproject/galaxy/pull/500
|
||||
.. _Pull Request 509: https://github.com/galaxyproject/galaxy/pull/509
|
||||
.. _Pull Request 510: https://github.com/galaxyproject/galaxy/pull/510
|
||||
.. _Pull Request 511: https://github.com/galaxyproject/galaxy/pull/511
|
||||
.. _Pull Request 512: https://github.com/galaxyproject/galaxy/pull/512
|
||||
.. _Pull Request 514: https://github.com/galaxyproject/galaxy/pull/514
|
||||
.. _Pull Request 515: https://github.com/galaxyproject/galaxy/pull/515
|
||||
.. _Pull Request 516: https://github.com/galaxyproject/galaxy/pull/516
|
||||
.. _Pull Request 517: https://github.com/galaxyproject/galaxy/pull/517
|
||||
.. _Pull Request 526: https://github.com/galaxyproject/galaxy/pull/526
|
||||
.. _Pull Request 527: https://github.com/galaxyproject/galaxy/pull/527
|
||||
.. _Pull Request 529: https://github.com/galaxyproject/galaxy/pull/529
|
||||
.. _Pull Request 530: https://github.com/galaxyproject/galaxy/pull/530
|
||||
.. _Pull Request 532: https://github.com/galaxyproject/galaxy/pull/532
|
||||
.. _Pull Request 533: https://github.com/galaxyproject/galaxy/pull/533
|
||||
.. _Pull Request 536: https://github.com/galaxyproject/galaxy/pull/536
|
||||
.. _Pull Request 537: https://github.com/galaxyproject/galaxy/pull/537
|
||||
.. _Pull Request 538: https://github.com/galaxyproject/galaxy/pull/538
|
||||
.. _Pull Request 539: https://github.com/galaxyproject/galaxy/pull/539
|
||||
.. _Pull Request 540: https://github.com/galaxyproject/galaxy/pull/540
|
||||
.. _Pull Request 543: https://github.com/galaxyproject/galaxy/pull/543
|
||||
.. _Pull Request 544: https://github.com/galaxyproject/galaxy/pull/544
|
||||
.. _Pull Request 545: https://github.com/galaxyproject/galaxy/pull/545
|
||||
.. _Pull Request 546: https://github.com/galaxyproject/galaxy/pull/546
|
||||
.. _Pull Request 550: https://github.com/galaxyproject/galaxy/pull/550
|
||||
.. _Pull Request 553: https://github.com/galaxyproject/galaxy/pull/553
|
||||
.. _Pull Request 556: https://github.com/galaxyproject/galaxy/pull/556
|
||||
.. _Pull Request 561: https://github.com/galaxyproject/galaxy/pull/561
|
||||
.. _Pull Request 565: https://github.com/galaxyproject/galaxy/pull/565
|
||||
.. _Pull Request 568: https://github.com/galaxyproject/galaxy/pull/568
|
||||
.. _Pull Request 569: https://github.com/galaxyproject/galaxy/pull/569
|
||||
.. _Pull Request 574: https://github.com/galaxyproject/galaxy/pull/574
|
||||
.. _Pull Request 575: https://github.com/galaxyproject/galaxy/pull/575
|
||||
.. _Pull Request 576: https://github.com/galaxyproject/galaxy/pull/576
|
||||
.. _Pull Request 577: https://github.com/galaxyproject/galaxy/pull/577
|
||||
.. _Pull Request 578: https://github.com/galaxyproject/galaxy/pull/578
|
||||
.. _Pull Request 581: https://github.com/galaxyproject/galaxy/pull/581
|
||||
.. _Pull Request 582: https://github.com/galaxyproject/galaxy/pull/582
|
||||
.. _Pull Request 583: https://github.com/galaxyproject/galaxy/pull/583
|
||||
.. _Pull Request 584: https://github.com/galaxyproject/galaxy/pull/584
|
||||
.. _Pull Request 585: https://github.com/galaxyproject/galaxy/pull/585
|
||||
.. _Pull Request 586: https://github.com/galaxyproject/galaxy/pull/586
|
||||
.. _Pull Request 587: https://github.com/galaxyproject/galaxy/pull/587
|
||||
.. _Pull Request 588: https://github.com/galaxyproject/galaxy/pull/588
|
||||
.. _Pull Request 589: https://github.com/galaxyproject/galaxy/pull/589
|
||||
.. _Pull Request 591: https://github.com/galaxyproject/galaxy/pull/591
|
||||
.. _Pull Request 592: https://github.com/galaxyproject/galaxy/pull/592
|
||||
.. _Pull Request 594: https://github.com/galaxyproject/galaxy/pull/594
|
||||
.. _Pull Request 596: https://github.com/galaxyproject/galaxy/pull/596
|
||||
.. _Pull Request 597: https://github.com/galaxyproject/galaxy/pull/597
|
||||
.. _Pull Request 601: https://github.com/galaxyproject/galaxy/pull/601
|
||||
.. _Pull Request 604: https://github.com/galaxyproject/galaxy/pull/604
|
||||
.. _Pull Request 605: https://github.com/galaxyproject/galaxy/pull/605
|
||||
.. _Pull Request 607: https://github.com/galaxyproject/galaxy/pull/607
|
||||
.. _Pull Request 609: https://github.com/galaxyproject/galaxy/pull/609
|
||||
.. _Pull Request 611: https://github.com/galaxyproject/galaxy/pull/611
|
||||
.. _Pull Request 612: https://github.com/galaxyproject/galaxy/pull/612
|
||||
.. _Pull Request 613: https://github.com/galaxyproject/galaxy/pull/613
|
||||
.. _Pull Request 614: https://github.com/galaxyproject/galaxy/pull/614
|
||||
.. _Pull Request 617: https://github.com/galaxyproject/galaxy/pull/617
|
||||
.. _Pull Request 619: https://github.com/galaxyproject/galaxy/pull/619
|
||||
.. _Pull Request 620: https://github.com/galaxyproject/galaxy/pull/620
|
||||
.. _Pull Request 626: https://github.com/galaxyproject/galaxy/pull/626
|
||||
.. _Pull Request 628: https://github.com/galaxyproject/galaxy/pull/628
|
||||
.. _Pull Request 632: https://github.com/galaxyproject/galaxy/pull/632
|
||||
.. _Pull Request 640: https://github.com/galaxyproject/galaxy/pull/640
|
||||
.. _Pull Request 646: https://github.com/galaxyproject/galaxy/pull/646
|
||||
.. _Pull Request 648: https://github.com/galaxyproject/galaxy/pull/648
|
||||
.. _Pull Request 650: https://github.com/galaxyproject/galaxy/pull/650
|
||||
.. _Pull Request 651: https://github.com/galaxyproject/galaxy/pull/651
|
||||
.. _Pull Request 652: https://github.com/galaxyproject/galaxy/pull/652
|
||||
.. _Pull Request 653: https://github.com/galaxyproject/galaxy/pull/653
|
||||
.. _Pull Request 654: https://github.com/galaxyproject/galaxy/pull/654
|
||||
.. _Pull Request 655: https://github.com/galaxyproject/galaxy/pull/655
|
||||
.. _Pull Request 656: https://github.com/galaxyproject/galaxy/pull/656
|
||||
.. _Pull Request 660: https://github.com/galaxyproject/galaxy/pull/660
|
||||
.. _Pull Request 661: https://github.com/galaxyproject/galaxy/pull/661
|
||||
.. _Pull Request 662: https://github.com/galaxyproject/galaxy/pull/662
|
||||
.. _Pull Request 665: https://github.com/galaxyproject/galaxy/pull/665
|
||||
.. _Pull Request 669: https://github.com/galaxyproject/galaxy/pull/669
|
||||
.. _Pull Request 671: https://github.com/galaxyproject/galaxy/pull/671
|
||||
.. _Pull Request 675: https://github.com/galaxyproject/galaxy/pull/675
|
||||
.. _Pull Request 676: https://github.com/galaxyproject/galaxy/pull/676
|
||||
.. _Pull Request 678: https://github.com/galaxyproject/galaxy/pull/678
|
||||
.. _Pull Request 681: https://github.com/galaxyproject/galaxy/pull/681
|
||||
.. _Pull Request 682: https://github.com/galaxyproject/galaxy/pull/682
|
||||
.. _Pull Request 684: https://github.com/galaxyproject/galaxy/pull/684
|
||||
.. _Pull Request 685: https://github.com/galaxyproject/galaxy/pull/685
|
||||
.. _Pull Request 688: https://github.com/galaxyproject/galaxy/pull/688
|
||||
.. _Pull Request 690: https://github.com/galaxyproject/galaxy/pull/690
|
||||
.. _Pull Request 693: https://github.com/galaxyproject/galaxy/pull/693
|
||||
.. _Pull Request 694: https://github.com/galaxyproject/galaxy/pull/694
|
||||
.. _Pull Request 695: https://github.com/galaxyproject/galaxy/pull/695
|
||||
.. _Pull Request 696: https://github.com/galaxyproject/galaxy/pull/696
|
||||
.. _Pull Request 698: https://github.com/galaxyproject/galaxy/pull/698
|
||||
.. _Pull Request 701: https://github.com/galaxyproject/galaxy/pull/701
|
||||
.. _Pull Request 702: https://github.com/galaxyproject/galaxy/pull/702
|
||||
.. _Pull Request 703: https://github.com/galaxyproject/galaxy/pull/703
|
||||
.. _Pull Request 705: https://github.com/galaxyproject/galaxy/pull/705
|
||||
.. _Pull Request 706: https://github.com/galaxyproject/galaxy/pull/706
|
||||
.. _Pull Request 708: https://github.com/galaxyproject/galaxy/pull/708
|
||||
.. _Pull Request 709: https://github.com/galaxyproject/galaxy/pull/709
|
||||
.. _Pull Request 710: https://github.com/galaxyproject/galaxy/pull/710
|
||||
.. _Pull Request 711: https://github.com/galaxyproject/galaxy/pull/711
|
||||
.. _Pull Request 712: https://github.com/galaxyproject/galaxy/pull/712
|
||||
.. _Pull Request 720: https://github.com/galaxyproject/galaxy/pull/720
|
||||
.. _Pull Request 721: https://github.com/galaxyproject/galaxy/pull/721
|
||||
.. _Pull Request 722: https://github.com/galaxyproject/galaxy/pull/722
|
||||
.. _Pull Request 725: https://github.com/galaxyproject/galaxy/pull/725
|
||||
.. _Pull Request 726: https://github.com/galaxyproject/galaxy/pull/726
|
||||
.. _Pull Request 727: https://github.com/galaxyproject/galaxy/pull/727
|
||||
.. _Pull Request 728: https://github.com/galaxyproject/galaxy/pull/728
|
||||
.. _Pull Request 729: https://github.com/galaxyproject/galaxy/pull/729
|
||||
.. _Pull Request 730: https://github.com/galaxyproject/galaxy/pull/730
|
||||
.. _Pull Request 731: https://github.com/galaxyproject/galaxy/pull/731
|
||||
.. _Pull Request 732: https://github.com/galaxyproject/galaxy/pull/732
|
||||
.. _Pull Request 735: https://github.com/galaxyproject/galaxy/pull/735
|
||||
.. _Pull Request 736: https://github.com/galaxyproject/galaxy/pull/736
|
||||
.. _Pull Request 738: https://github.com/galaxyproject/galaxy/pull/738
|
||||
.. _Pull Request 739: https://github.com/galaxyproject/galaxy/pull/739
|
||||
.. _Pull Request 741: https://github.com/galaxyproject/galaxy/pull/741
|
||||
.. _Pull Request 742: https://github.com/galaxyproject/galaxy/pull/742
|
||||
.. _Pull Request 748: https://github.com/galaxyproject/galaxy/pull/748
|
||||
.. _Pull Request 751: https://github.com/galaxyproject/galaxy/pull/751
|
||||
.. _Pull Request 752: https://github.com/galaxyproject/galaxy/pull/752
|
||||
.. _Pull Request 755: https://github.com/galaxyproject/galaxy/pull/755
|
||||
.. _Pull Request 757: https://github.com/galaxyproject/galaxy/pull/757
|
||||
.. _Pull Request 758: https://github.com/galaxyproject/galaxy/pull/758
|
||||
.. _Pull Request 759: https://github.com/galaxyproject/galaxy/pull/759
|
||||
.. _Pull Request 760: https://github.com/galaxyproject/galaxy/pull/760
|
||||
.. _Pull Request 761: https://github.com/galaxyproject/galaxy/pull/761
|
||||
.. _Pull Request 763: https://github.com/galaxyproject/galaxy/pull/763
|
||||
.. _Pull Request 764: https://github.com/galaxyproject/galaxy/pull/764
|
||||
.. _Pull Request 765: https://github.com/galaxyproject/galaxy/pull/765
|
||||
.. _Pull Request 766: https://github.com/galaxyproject/galaxy/pull/766
|
||||
.. _Pull Request 770: https://github.com/galaxyproject/galaxy/pull/770
|
||||
.. _Pull Request 771: https://github.com/galaxyproject/galaxy/pull/771
|
||||
.. _Pull Request 772: https://github.com/galaxyproject/galaxy/pull/772
|
||||
.. _Pull Request 775: https://github.com/galaxyproject/galaxy/pull/775
|
||||
.. _Pull Request 777: https://github.com/galaxyproject/galaxy/pull/777
|
||||
.. _Pull Request 778: https://github.com/galaxyproject/galaxy/pull/778
|
||||
.. _Pull Request 782: https://github.com/galaxyproject/galaxy/pull/782
|
||||
.. _Pull Request 784: https://github.com/galaxyproject/galaxy/pull/784
|
||||
.. _Pull Request 786: https://github.com/galaxyproject/galaxy/pull/786
|
||||
.. _Pull Request 790: https://github.com/galaxyproject/galaxy/pull/790
|
||||
.. _Pull Request 791: https://github.com/galaxyproject/galaxy/pull/791
|
||||
.. _Pull Request 793: https://github.com/galaxyproject/galaxy/pull/793
|
||||
.. _Pull Request 796: https://github.com/galaxyproject/galaxy/pull/796
|
||||
.. _Pull Request 799: https://github.com/galaxyproject/galaxy/pull/799
|
||||
.. _Pull Request 800: https://github.com/galaxyproject/galaxy/pull/800
|
||||
.. _Pull Request 803: https://github.com/galaxyproject/galaxy/pull/803
|
||||
.. _Pull Request 806: https://github.com/galaxyproject/galaxy/pull/806
|
||||
.. _Pull Request 807: https://github.com/galaxyproject/galaxy/pull/807
|
||||
.. _Pull Request 812: https://github.com/galaxyproject/galaxy/pull/812
|
||||
.. _Pull Request 813: https://github.com/galaxyproject/galaxy/pull/813
|
||||
.. _Pull Request 817: https://github.com/galaxyproject/galaxy/pull/817
|
||||
.. _Pull Request 819: https://github.com/galaxyproject/galaxy/pull/819
|
||||
.. _Pull Request 820: https://github.com/galaxyproject/galaxy/pull/820
|
||||
.. _Pull Request 821: https://github.com/galaxyproject/galaxy/pull/821
|
||||
.. _Pull Request 822: https://github.com/galaxyproject/galaxy/pull/822
|
||||
.. _Pull Request 824: https://github.com/galaxyproject/galaxy/pull/824
|
||||
.. _Pull Request 825: https://github.com/galaxyproject/galaxy/pull/825
|
||||
.. _Pull Request 826: https://github.com/galaxyproject/galaxy/pull/826
|
||||
.. _Pull Request 828: https://github.com/galaxyproject/galaxy/pull/828
|
||||
.. _Pull Request 830: https://github.com/galaxyproject/galaxy/pull/830
|
||||
.. _Pull Request 838: https://github.com/galaxyproject/galaxy/pull/838
|
||||
.. _Pull Request 839: https://github.com/galaxyproject/galaxy/pull/839
|
||||
.. _Pull Request 840: https://github.com/galaxyproject/galaxy/pull/840
|
||||
.. _Pull Request 842: https://github.com/galaxyproject/galaxy/pull/842
|
||||
.. _Pull Request 843: https://github.com/galaxyproject/galaxy/pull/843
|
||||
.. _Pull Request 844: https://github.com/galaxyproject/galaxy/pull/844
|
||||
.. _Pull Request 846: https://github.com/galaxyproject/galaxy/pull/846
|
||||
.. _Pull Request 847: https://github.com/galaxyproject/galaxy/pull/847
|
||||
.. _Pull Request 848: https://github.com/galaxyproject/galaxy/pull/848
|
||||
.. _Pull Request 849: https://github.com/galaxyproject/galaxy/pull/849
|
||||
.. _Pull Request 854: https://github.com/galaxyproject/galaxy/pull/854
|
||||
.. _Pull Request 873: https://github.com/galaxyproject/galaxy/pull/873
|
||||
.. _Pull Request 878: https://github.com/galaxyproject/galaxy/pull/878
|
||||
.. _Pull Request 879: https://github.com/galaxyproject/galaxy/pull/879
|
||||
.. _Pull Request 910: https://github.com/galaxyproject/galaxy/pull/910
|
||||
.. _Pull Request 913: https://github.com/galaxyproject/galaxy/pull/913
|
||||
@@ -1,9 +1,81 @@
|
||||
|
||||
===========================================================
|
||||
October 2015 Galaxy Release (v 15.10)
|
||||
===========================================================
|
||||
|
||||
.. include:: _header.rst
|
||||
|
||||
Schedule
|
||||
Highlights
|
||||
===========================================================
|
||||
* Planned Freeze Date: October 5, 2015
|
||||
* Planned Release Date: October 26, 2015
|
||||
|
||||
**Reports Application**
|
||||
The reports web application has been greatly enhanced - including
|
||||
improved styling, new landing page, more reports, pagination, and
|
||||
sparklines. Huge thanks to Daniel Bouchard
|
||||
(`@Airistotal <https://github.com/Airistotal>`__) for these
|
||||
enhancements.
|
||||
|
||||
**Upload**
|
||||
The Galaxy upload widget now features support for composite datatypes and
|
||||
improved styling.
|
||||
|
||||
**Data Libraries**
|
||||
Improved API and UI for data libraries - including support for library
|
||||
folder management and search.
|
||||
|
||||
`Github <https://github.com/galaxyproject/galaxy>`__
|
||||
===========================================================
|
||||
|
||||
New
|
||||
.. code-block:: shell
|
||||
|
||||
% git clone -b master https://github.com/galaxyproject/galaxy.git
|
||||
|
||||
Update to latest stable release
|
||||
.. code-block:: shell
|
||||
|
||||
% git checkout master && pull --ff-only origin master
|
||||
|
||||
Update to exact version
|
||||
.. code-block:: shell
|
||||
|
||||
% git checkout v15.10
|
||||
|
||||
|
||||
`BitBucket <https://bitbucket.org/galaxy/galaxy-dist>`__
|
||||
===========================================================
|
||||
|
||||
Upgrade
|
||||
.. code-block:: shell
|
||||
|
||||
% hg pull
|
||||
% hg update latest_15.10
|
||||
|
||||
|
||||
See `our wiki <https://wiki.galaxyproject.org/Develop/SourceCode>`__ for additional details regarding the source code locations.
|
||||
|
||||
|
||||
Deprecation Notices
|
||||
===========================================================
|
||||
|
||||
The Mercurial repository at https://bitbucket.org/galaxy/galaxy-dist is deprecated.
|
||||
**We recommend deployers to switch their instances to git** and follow the `master`
|
||||
branch of GitHub repository https://github.com/galaxyproject/galaxy
|
||||
Details are available at https://wiki.galaxyproject.org/Develop/SourceCode
|
||||
*The Mercurial repository will be kept up to date for next few releases.*
|
||||
|
||||
The **old UI of Data Libraries is deprecated** and will be removed in the
|
||||
next release of Galaxy. The current Data Libraries Beta will replace it.
|
||||
The Data Library menu items were renamed accordingly.
|
||||
|
||||
The **graphview visualization is deprecated** and will be replaced in the next
|
||||
release of Galaxy.
|
||||
|
||||
|
||||
Release Notes
|
||||
===========================================================
|
||||
|
||||
.. include:: 15.10.rst
|
||||
:start-after: enhancements
|
||||
|
||||
.. include:: _thanks.rst
|
||||
|
||||
@@ -0,0 +1,10 @@
|
||||
|
||||
===========================================================
|
||||
January 2016 Galaxy Release (v 16.01)
|
||||
===========================================================
|
||||
|
||||
|
||||
Schedule
|
||||
===========================================================
|
||||
* Planned Freeze Date: 2016-01-04
|
||||
* Planned Release Date: 2016-01-25
|
||||
@@ -2,9 +2,11 @@
|
||||
# Little script to make HISTORY.rst more easy to format properly, lots TODO
|
||||
# pull message down and embed, use arg parse, handle multiple, etc...
|
||||
|
||||
import calendar
|
||||
import datetime
|
||||
import os
|
||||
import re
|
||||
import string
|
||||
import sys
|
||||
try:
|
||||
import requests
|
||||
@@ -28,7 +30,8 @@ PROJECT_API = "https://api.github.com/repos/%s/%s/" % (PROJECT_OWNER, PROJECT_NA
|
||||
RELEASES = [
|
||||
("15.05", "b16ac25cdc0f2b64d6af34ea1e6ff253d8a71ee4"),
|
||||
("15.07", "e44c8db9dea56b8d1a2f941ce572b0f14e999d4c"),
|
||||
("15.10", "d554136658e165c84a42b988f39009c185325919"),
|
||||
("15.10", "ef55279d58eced4b90632a572a8fc5a227ceefb9"),
|
||||
("16.01", "cc23adb0a962f1c9780b838604718319a0a71888"),
|
||||
]
|
||||
|
||||
# Uncredit pull requestors... kind of arbitrary at this point.
|
||||
@@ -58,9 +61,9 @@ Fixes
|
||||
"""
|
||||
|
||||
# TODO: for 15.10 use this template...
|
||||
ANNOUNCE_TEMPLATE = """
|
||||
ANNOUNCE_TEMPLATE = string.Template("""
|
||||
===========================================================
|
||||
TODO Galaxy Release (v %s)
|
||||
${month_name} 20${year} Galaxy Release (v ${release})
|
||||
===========================================================
|
||||
|
||||
.. include:: _header.rst
|
||||
@@ -93,7 +96,7 @@ Update to latest stable release
|
||||
Update to exact version
|
||||
.. code-block:: shell
|
||||
|
||||
% git checkout v%s
|
||||
% git checkout v${release}
|
||||
|
||||
|
||||
`BitBucket <https://bitbucket.org/galaxy/galaxy-dist>`__
|
||||
@@ -103,7 +106,7 @@ Upgrade
|
||||
.. code-block:: shell
|
||||
|
||||
% hg pull
|
||||
% hg update latest_%s
|
||||
% hg update latest_${release}
|
||||
|
||||
|
||||
See `our wiki <https://wiki.galaxyproject.org/Develop/SourceCode>`__ for additional details regarding the source code locations.
|
||||
@@ -111,12 +114,23 @@ See `our wiki <https://wiki.galaxyproject.org/Develop/SourceCode>`__ for additio
|
||||
Release Notes
|
||||
===========================================================
|
||||
|
||||
.. include:: %s.rst
|
||||
.. include:: ${release}.rst
|
||||
:start-after: enhancements
|
||||
|
||||
.. include:: _thanks.rst
|
||||
"""
|
||||
""")
|
||||
|
||||
NEXT_TEMPLATE = string.Template("""
|
||||
===========================================================
|
||||
${month_name} 20${year} Galaxy Release (v ${version})
|
||||
===========================================================
|
||||
|
||||
|
||||
Schedule
|
||||
===========================================================
|
||||
* Planned Freeze Date: ${freeze_date}
|
||||
* Planned Release Date: ${release_date}
|
||||
""")
|
||||
|
||||
# https://api.github.com/repos/galaxyproject/galaxy/pulls?base=dev&state=closed
|
||||
# https://api.github.com/repos/galaxyproject/galaxy/pulls?base=release_15.07&state=closed
|
||||
@@ -134,7 +148,39 @@ def do_release(argv):
|
||||
release_file = _release_file(release_name + ".rst")
|
||||
release_info = TEMPLATE % release_name
|
||||
open(release_file, "w").write(release_info.encode("utf-8"))
|
||||
print release_info
|
||||
month = int(release_name.split(".")[1])
|
||||
month_name = calendar.month_name[month]
|
||||
year = release_name.split(".")[0]
|
||||
|
||||
announce_info = ANNOUNCE_TEMPLATE.substitute(
|
||||
month_name=month_name,
|
||||
year=year,
|
||||
release=release_name
|
||||
)
|
||||
announce_file = _release_file(release_name + "_announce.rst")
|
||||
open(announce_file, "w").write(announce_info.encode("utf-8"))
|
||||
|
||||
next_month = (((month - 1) + 3) % 12) + 1
|
||||
next_month_name = calendar.month_name[next_month]
|
||||
if next_month < 3:
|
||||
next_year = int(year) + 1
|
||||
else:
|
||||
next_year = year
|
||||
next_version = "%s.%02d" % (next_year, next_month)
|
||||
first_of_next_month = datetime.date(next_year + 2000, next_month, 1)
|
||||
freeze_date = next_weekday(first_of_next_month, 0)
|
||||
release_date = next_weekday(first_of_next_month, 0) + datetime.timedelta(21)
|
||||
|
||||
next_release_file = _release_file(next_version + "_announce.rst")
|
||||
next_announce = NEXT_TEMPLATE.substitute(
|
||||
version=next_version,
|
||||
year=next_year,
|
||||
month_name=next_month_name,
|
||||
freeze_date=freeze_date,
|
||||
release_date=release_date,
|
||||
)
|
||||
open(next_release_file, "w").write(next_announce.encode("utf-8"))
|
||||
|
||||
release_commit_start = None
|
||||
release_commit_end = None
|
||||
|
||||
@@ -180,6 +226,8 @@ def _get_prs():
|
||||
|
||||
|
||||
def main(argv):
|
||||
if requests is None:
|
||||
raise Exception("Requests library not found, please pip install requests")
|
||||
github = _github_client()
|
||||
newest_release = None
|
||||
|
||||
@@ -247,27 +295,32 @@ def main(argv):
|
||||
text = ".. _Pull Request {0}: {1}/pull/{0}".format(pull_request, PROJECT_URL)
|
||||
history = extend(".. github_links", text)
|
||||
if owner:
|
||||
to_doc += "(Thanks to `@%s <https://github.com/%s>`__.) " % (
|
||||
to_doc += "\n(Thanks to `@%s <https://github.com/%s>`__.)" % (
|
||||
owner, owner,
|
||||
)
|
||||
to_doc += "`Pull Request {0}`_".format(pull_request)
|
||||
to_doc += "\n`Pull Request {0}`_".format(pull_request)
|
||||
if github:
|
||||
labels = []
|
||||
try:
|
||||
labels = github.issues.labels.list_by_issue(int(pull_request), user=PROJECT_OWNER, repo=PROJECT_NAME)
|
||||
except:
|
||||
except Exception:
|
||||
pass
|
||||
is_bug = is_enhancement = False
|
||||
is_bug = is_enhancement = is_minor = False
|
||||
for label in labels:
|
||||
if label.name == "bug":
|
||||
if label.name.lower() == "minor":
|
||||
is_minor = True
|
||||
if label.name.lower() == "bug":
|
||||
is_bug = True
|
||||
if label.name == "enhancement":
|
||||
if label.name.lower() == "enhancement":
|
||||
is_enhancement = True
|
||||
if is_minor:
|
||||
return
|
||||
if is_enhancement:
|
||||
text_target = "enhancements"
|
||||
elif is_bug:
|
||||
text_target = "fixes"
|
||||
else:
|
||||
print "Problem not label for %s" % pull_request
|
||||
text_target = None
|
||||
elif ident.startswith("issue"):
|
||||
issue = ident[len("issue"):]
|
||||
@@ -321,7 +374,20 @@ def wrap(message):
|
||||
wrapper = textwrap.TextWrapper(initial_indent="* ")
|
||||
wrapper.subsequent_indent = ' '
|
||||
wrapper.width = 78
|
||||
return "\n".join(wrapper.wrap(message))
|
||||
message_lines = message.splitlines()
|
||||
first_lines = "\n".join(wrapper.wrap(message_lines[0]))
|
||||
wrapper.initial_indent = " "
|
||||
rest_lines = "\n".join(["\n".join(wrapper.wrap(m)) for m in message_lines[1:]])
|
||||
return first_lines + ("\n" + rest_lines if rest_lines else "")
|
||||
|
||||
|
||||
def next_weekday(d, weekday):
|
||||
""" Return the next week day (0 for Monday, 6 for Sunday) starting from ``d``. """
|
||||
days_ahead = weekday - d.weekday()
|
||||
if days_ahead <= 0: # Target day already happened this week
|
||||
days_ahead += 7
|
||||
return d + datetime.timedelta(days_ahead)
|
||||
|
||||
|
||||
if __name__ == "__main__":
|
||||
main(sys.argv)
|
||||
|
||||
Reference in New Issue
Block a user