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Fix test

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This commit is contained in:
Nate Coraor
2025-02-19 13:09:00 -05:00
parent 6d4b345111
commit a987e3ddc6
1 changed files with 1 additions and 2 deletions
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test/unit/app/jobs/test_command_factory.py
+1 -2
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@@ -9,7 +9,6 @@ from typing import (
from galaxy.jobs.command_factory import (
build_command,
PREPARE_DIRS,
SETUP_GALAXY_FOR_METADATA,
)
from galaxy.tool_util.deps.container_classes import TRAP_KILL_CONTAINER
@@ -188,7 +187,7 @@ class TestCommandFactory(TestCase):
return build_command(**kwds)
def _surround_command(self, command, post_command=""):
command = f'''{PREPARE_DIRS};{self.TEE_LOG}{command} {self.CAPTURE_AND_REDIRECT}{post_command}; sh -c "exit $return_code"'''
command = f'''cd working;{self.TEE_LOG}{command} {self.CAPTURE_AND_REDIRECT}{post_command}; sh -c "exit $return_code"'''
return command.replace("galaxy_1.ec", os.path.join(self.job_wrapper.working_directory, "galaxy_1.ec"), 1)