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Release notes for 21.05
This commit is contained in:
mvdbeek
@@ -0,0 +1,803 @@
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.. to_doc
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21.05
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===============================
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.. announce_start
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||||
Enhancements
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||||
-------------------------------
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||||
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||||
.. major_feature
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||||
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||||
* Beta History scrolling behavior and polling efficiency tuning
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||||
`Pull Request 11693`_
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||||
|
||||
.. feature
|
||||
|
||||
* Add FastAPI routes for tours
|
||||
`Pull Request 11089`_
|
||||
* Add FastAPI routes for datatypes
|
||||
(thanks to `@davelopez <https://github.com/davelopez>`__).
|
||||
`Pull Request 11098`_
|
||||
* Add cache_dir to schema
|
||||
`Pull Request 11202`_
|
||||
* Allow requesting extra scopes
|
||||
(thanks to `@hexylena <https://github.com/hexylena>`__).
|
||||
`Pull Request 11561`_
|
||||
* Github workflow for updating dependencies
|
||||
`Pull Request 11570`_
|
||||
* Allow line break html tag in markdown pages
|
||||
`Pull Request 11592`_
|
||||
* Allow workflow imports in pages
|
||||
`Pull Request 11607`_
|
||||
* Add option to download collections in markdown pages
|
||||
`Pull Request 11676`_
|
||||
* Add the SimText shiny app as Interactive Tool
|
||||
(thanks to `@dlal-group <https://github.com/dlal-group>`__).
|
||||
`Pull Request 11680`_
|
||||
* Replace sqlalchemy-utilities with local implementation
|
||||
`Pull Request 11696`_
|
||||
* Circus + Celery - MVP
|
||||
`Pull Request 11720`_
|
||||
* Support role and group permissions in file sources plugins
|
||||
(thanks to `@davelopez <https://github.com/davelopez>`__).
|
||||
`Pull Request 11769`_
|
||||
* Add circus + gunicorn option when using run.sh
|
||||
`Pull Request 11772`_
|
||||
* Run history export setup via celery, if configured
|
||||
`Pull Request 11789`_
|
||||
* Allow importing histories through pages / reports
|
||||
`Pull Request 11863`_
|
||||
.. enhancement_tag_viz
|
||||
|
||||
* Migrate api/genomes to fastapi
|
||||
`Pull Request 11241`_
|
||||
.. enhancement_tag_datatypes
|
||||
|
||||
* Add FlowCytometry and MetaCyto datatypes
|
||||
(thanks to `@pcm32 <https://github.com/pcm32>`__).
|
||||
`Pull Request 9807`_
|
||||
* Add mrc datatype (and Python dependency)
|
||||
(thanks to `@gregvonkuster <https://github.com/gregvonkuster>`__).
|
||||
`Pull Request 11220`_
|
||||
* Add HHR datatype
|
||||
(thanks to `@bgruening <https://github.com/bgruening>`__).
|
||||
`Pull Request 11661`_
|
||||
* add meryldb datatype
|
||||
(thanks to `@bgruening <https://github.com/bgruening>`__).
|
||||
`Pull Request 11694`_
|
||||
* Add datatype for PretextMap output
|
||||
`Pull Request 11747`_
|
||||
* add new datatype class for meryldb
|
||||
(thanks to `@bgruening <https://github.com/bgruening>`__).
|
||||
`Pull Request 11758`_
|
||||
* Make Avivator GEDA and sniffer for ome.tiff datatype
|
||||
(thanks to `@qiagu <https://github.com/qiagu>`__).
|
||||
`Pull Request 11801`_
|
||||
* jellyfish db datatype
|
||||
(thanks to `@astrovsky01 <https://github.com/astrovsky01>`__).
|
||||
`Pull Request 11802`_
|
||||
* add new datatype JPEG 2000 in Galaxy
|
||||
(thanks to `@annefou <https://github.com/annefou>`__).
|
||||
`Pull Request 11812`_
|
||||
* Make datatype h5_model for machine leaning models
|
||||
(thanks to `@qiagu <https://github.com/qiagu>`__).
|
||||
`Pull Request 11825`_
|
||||
* Add support for the Relion STAR data format
|
||||
(thanks to `@gregvonkuster <https://github.com/gregvonkuster>`__).
|
||||
`Pull Request 11831`_
|
||||
* add minerva display app for covid
|
||||
(thanks to `@hexylena <https://github.com/hexylena>`__).
|
||||
`Pull Request 11880`_
|
||||
* Add toml datatype
|
||||
(thanks to `@jj-umn <https://github.com/jj-umn>`__).
|
||||
`Pull Request 11909`_
|
||||
.. enhancement_tag_tools
|
||||
|
||||
* grep, tail, head: add option to keep header
|
||||
(thanks to `@bernt-matthias <https://github.com/bernt-matthias>`__).
|
||||
`Pull Request 11859`_
|
||||
* add a bit of docs to the add tags tool
|
||||
(thanks to `@bernt-matthias <https://github.com/bernt-matthias>`__).
|
||||
`Pull Request 11874`_
|
||||
.. enhancement_tag_workflows
|
||||
|
||||
* Selenium test case for invocation grid + display.
|
||||
`Pull Request 11160`_
|
||||
* be more verbose on output filter errors
|
||||
(thanks to `@bernt-matthias <https://github.com/bernt-matthias>`__).
|
||||
`Pull Request 11197`_
|
||||
* Add UpgradeAllSteps workflow refactor action
|
||||
(thanks to `@simonbray <https://github.com/simonbray>`__).
|
||||
`Pull Request 11429`_
|
||||
* Guess tool name when extracting workflows with imported datasets
|
||||
(thanks to `@davelopez <https://github.com/davelopez>`__).
|
||||
`Pull Request 11483`_
|
||||
* Avoid appending imported source on workflow name multiple times.
|
||||
(thanks to `@davelopez <https://github.com/davelopez>`__).
|
||||
`Pull Request 11671`_
|
||||
* Switch default handler assignment to skip locked or transaction isolation if possible
|
||||
`Pull Request 11792`_
|
||||
.. enhancement_tag_ui
|
||||
|
||||
* Client testing/linting updates and followup
|
||||
`Pull Request 11121`_
|
||||
* replaced global vue with test vue in unit tests
|
||||
`Pull Request 11138`_
|
||||
* Manage folder rewrite in Vue & VueRouter
|
||||
(thanks to `@OlegZharkov <https://github.com/OlegZharkov>`__).
|
||||
`Pull Request 11259`_
|
||||
* Copy to Clipboard button next to the tool id in job information
|
||||
(thanks to `@OlegZharkov <https://github.com/OlegZharkov>`__).
|
||||
`Pull Request 11478`_
|
||||
* Better webpack-dev-server handling.
|
||||
`Pull Request 11566`_
|
||||
* Speed up get history list
|
||||
`Pull Request 11883`_
|
||||
* Implement switch to history modal for beta history panel
|
||||
`Pull Request 11895`_
|
||||
.. enhancement_tag_jobs
|
||||
|
||||
* Store job_id on Dataset table.
|
||||
`Pull Request 10222`_
|
||||
* Handle unschedulable jobs in k8s runner
|
||||
(thanks to `@almahmoud <https://github.com/almahmoud>`__).
|
||||
`Pull Request 10496`_
|
||||
* Establish a best practice for trans dependency management.
|
||||
`Pull Request 11113`_
|
||||
* Adding GALAXY_MEMORY_MB_PER_SLOT to k8s runner
|
||||
(thanks to `@almahmoud <https://github.com/almahmoud>`__).
|
||||
`Pull Request 11227`_
|
||||
* add reworked chronos job runner
|
||||
(thanks to `@mtangaro <https://github.com/mtangaro>`__).
|
||||
`Pull Request 11228`_
|
||||
* Generalise rule helper to detect whether tools can use any container
|
||||
(thanks to `@pcm32 <https://github.com/pcm32>`__).
|
||||
`Pull Request 11274`_
|
||||
* Only return a subset of jobs ready to run per user when querying for jobs ready to run
|
||||
`Pull Request 11358`_
|
||||
* ITs on Kubernetes
|
||||
(thanks to `@almahmoud <https://github.com/almahmoud>`__).
|
||||
`Pull Request 11383`_
|
||||
* Read cgroups from cgroup filesystem mount rather than cgget, which is not always installed
|
||||
`Pull Request 11393`_
|
||||
* SLURM: stop editing job stderr file
|
||||
(thanks to `@bernt-matthias <https://github.com/bernt-matthias>`__).
|
||||
`Pull Request 11575`_
|
||||
* Fixes for extended metadata working with Pulsar.
|
||||
`Pull Request 11788`_
|
||||
* Fix collection state updates by setting collection update time
|
||||
`Pull Request 11849`_
|
||||
* Test a better Pulsar configuration for extended metadata.
|
||||
`Pull Request 11852`_
|
||||
* Add handler column in admin jobs, remove webcontroller
|
||||
`Pull Request 11868`_
|
||||
* improve three debug messages
|
||||
(thanks to `@bernt-matthias <https://github.com/bernt-matthias>`__).
|
||||
`Pull Request 11908`_
|
||||
.. enhancement_tag_admin
|
||||
|
||||
* Add documentation on how to setup Pulsar's two-container job runner
|
||||
`Pull Request 11557`_
|
||||
* sortable columns in Admin->Users
|
||||
(thanks to `@OlegZharkov <https://github.com/OlegZharkov>`__).
|
||||
`Pull Request 11665`_
|
||||
* Create install database with create_db.sh
|
||||
`Pull Request 11753`_
|
||||
.. enhancement
|
||||
|
||||
* Performance testing infrastructure.
|
||||
`Pull Request 10117`_
|
||||
* Stub MQ docs
|
||||
(thanks to `@brinkmanlab <https://github.com/brinkmanlab>`__).
|
||||
`Pull Request 10347`_
|
||||
* Implement read-only conda resolver.
|
||||
`Pull Request 10810`_
|
||||
* really test variables in conditionals
|
||||
(thanks to `@bernt-matthias <https://github.com/bernt-matthias>`__).
|
||||
`Pull Request 11111`_
|
||||
* Updated API Design Guidelines
|
||||
`Pull Request 11115`_
|
||||
* uvicorn-compatible factory function for fastapi.
|
||||
`Pull Request 11116`_
|
||||
* Dynamic discovery of FastAPI routers.
|
||||
`Pull Request 11124`_
|
||||
* FastAPI routes for configuration
|
||||
`Pull Request 11126`_
|
||||
* Start type signature for UniverseApplication.
|
||||
`Pull Request 11142`_
|
||||
* Various testing framework cleanups.
|
||||
`Pull Request 11156`_
|
||||
* FastAPI routes for tool data tables
|
||||
(thanks to `@davelopez <https://github.com/davelopez>`__).
|
||||
`Pull Request 11167`_
|
||||
* Recommend 2FA and commit signing
|
||||
(thanks to `@nsoranzo <https://github.com/nsoranzo>`__).
|
||||
`Pull Request 11173`_
|
||||
* Warns that build_mulled_singularity requires docker
|
||||
(thanks to `@pcm32 <https://github.com/pcm32>`__).
|
||||
`Pull Request 11176`_
|
||||
* Documentation and helpers for using galaxy-selenium package within Jupyter
|
||||
`Pull Request 11177`_
|
||||
* History beta poll decay time reset
|
||||
`Pull Request 11178`_
|
||||
* Holistic approach to dependency injection.
|
||||
`Pull Request 11180`_
|
||||
* Selenium test for ``library_import_dir``
|
||||
(thanks to `@OlegZharkov <https://github.com/OlegZharkov>`__).
|
||||
`Pull Request 11188`_
|
||||
* Replace pipenv with poetry. Update all dependencies
|
||||
(thanks to `@nsoranzo <https://github.com/nsoranzo>`__).
|
||||
`Pull Request 11192`_
|
||||
* Add missing xml:lang attribute to documentation annotations
|
||||
(thanks to `@davelopez <https://github.com/davelopez>`__).
|
||||
`Pull Request 11198`_
|
||||
* Selenium tests for user library import dir
|
||||
(thanks to `@OlegZharkov <https://github.com/OlegZharkov>`__).
|
||||
`Pull Request 11203`_
|
||||
* FastAPI route for remote files
|
||||
(thanks to `@davelopez <https://github.com/davelopez>`__).
|
||||
`Pull Request 11211`_
|
||||
* More debug info for failed integration selenium tests during CI.
|
||||
`Pull Request 11217`_
|
||||
* Implement abstraction around InferringApiRouter tailored to typical Galaxy usage.
|
||||
`Pull Request 11219`_
|
||||
* FastAPI route for tags (Disabled)
|
||||
(thanks to `@davelopez <https://github.com/davelopez>`__).
|
||||
`Pull Request 11224`_
|
||||
* Remove `folder_up` button from data folder
|
||||
(thanks to `@OlegZharkov <https://github.com/OlegZharkov>`__).
|
||||
`Pull Request 11230`_
|
||||
* add ActionChains example in documentation of galaxy-selenium package within Jupyter
|
||||
(thanks to `@OlegZharkov <https://github.com/OlegZharkov>`__).
|
||||
`Pull Request 11232`_
|
||||
* Sync x-frame-options handling across frameworks and test.
|
||||
`Pull Request 11235`_
|
||||
* FastAPI/ASGI CORS handling.
|
||||
`Pull Request 11240`_
|
||||
* FastAPI routes for Pages (Disabled)
|
||||
(thanks to `@davelopez <https://github.com/davelopez>`__).
|
||||
`Pull Request 11262`_
|
||||
* Don't fail silently in `User.system_user_pwent()`
|
||||
(thanks to `@nsoranzo <https://github.com/nsoranzo>`__).
|
||||
`Pull Request 11272`_
|
||||
* Move docstring linting to GitHub workflows
|
||||
(thanks to `@nsoranzo <https://github.com/nsoranzo>`__).
|
||||
`Pull Request 11300`_
|
||||
* Add Nuwan Goonasekera to the committers group
|
||||
`Pull Request 11304`_
|
||||
* ignore subdirectories if recurse is false
|
||||
(thanks to `@bernt-matthias <https://github.com/bernt-matthias>`__).
|
||||
`Pull Request 11307`_
|
||||
* Fix transiently failing roles API test.
|
||||
`Pull Request 11319`_
|
||||
* Allow `GET /api/dataset_collections/{hdca_id}` without specifying `instance_type`
|
||||
(thanks to `@nsoranzo <https://github.com/nsoranzo>`__).
|
||||
`Pull Request 11346`_
|
||||
* Add support for Plausible analytics and Matomo analytics
|
||||
(thanks to `@selten <https://github.com/selten>`__).
|
||||
`Pull Request 11351`_
|
||||
* Lint for optional or multiple selects with radio display
|
||||
(thanks to `@bernt-matthias <https://github.com/bernt-matthias>`__).
|
||||
`Pull Request 11385`_
|
||||
* Test library dataset permissions
|
||||
(thanks to `@OlegZharkov <https://github.com/OlegZharkov>`__).
|
||||
`Pull Request 11402`_
|
||||
* Use request id middleware to scope session
|
||||
`Pull Request 11411`_
|
||||
* Move unit tests to GitHub workflows, test also under Python 3.9
|
||||
(thanks to `@nsoranzo <https://github.com/nsoranzo>`__).
|
||||
`Pull Request 11452`_
|
||||
* Allow anonymous access to S3 buckets via file sources plugins.
|
||||
`Pull Request 11458`_
|
||||
* add copy tooldID btn
|
||||
(thanks to `@OlegZharkov <https://github.com/OlegZharkov>`__).
|
||||
`Pull Request 11477`_
|
||||
* Libraries rewrite
|
||||
(thanks to `@OlegZharkov <https://github.com/OlegZharkov>`__).
|
||||
`Pull Request 11485`_
|
||||
* adding nameSuggestion to PairCollectionCreator
|
||||
(thanks to `@assuntad23 <https://github.com/assuntad23>`__).
|
||||
`Pull Request 11489`_
|
||||
* xsd: use validator as child of param
|
||||
(thanks to `@bernt-matthias <https://github.com/bernt-matthias>`__).
|
||||
`Pull Request 11497`_
|
||||
* add sshfs plugin to the new file infrastructure
|
||||
(thanks to `@bgruening <https://github.com/bgruening>`__).
|
||||
`Pull Request 11507`_
|
||||
* add ftp files.plugin
|
||||
(thanks to `@bgruening <https://github.com/bgruening>`__).
|
||||
`Pull Request 11508`_
|
||||
* Add ready-to-go gitpod config
|
||||
`Pull Request 11509`_
|
||||
* Create pull_request_template.md
|
||||
(thanks to `@assuntad23 <https://github.com/assuntad23>`__).
|
||||
`Pull Request 11530`_
|
||||
* Add more filtering options to api/jobs endpoint
|
||||
(thanks to `@rikeshi <https://github.com/rikeshi>`__).
|
||||
`Pull Request 11560`_
|
||||
* Migrate metrics API to FastAPI
|
||||
(thanks to `@davelopez <https://github.com/davelopez>`__).
|
||||
`Pull Request 11568`_
|
||||
* Sample conf for dropbox and owncloud file sources
|
||||
(thanks to `@abretaud <https://github.com/abretaud>`__).
|
||||
`Pull Request 11580`_
|
||||
* An attempt to improve dependency management
|
||||
`Pull Request 11619`_
|
||||
* Overhaul make-based release process
|
||||
`Pull Request 11641`_
|
||||
* Pin fs.webdavfs requirement to latest version
|
||||
(thanks to `@abretaud <https://github.com/abretaud>`__).
|
||||
`Pull Request 11648`_
|
||||
* Update all Python dependencies
|
||||
(thanks to `@nsoranzo <https://github.com/nsoranzo>`__).
|
||||
`Pull Request 11649`_
|
||||
* update to cope with impending changes to cwltool internals
|
||||
(thanks to `@rupertnash <https://github.com/rupertnash>`__).
|
||||
`Pull Request 11655`_
|
||||
* Lint for duplicated options
|
||||
(thanks to `@bernt-matthias <https://github.com/bernt-matthias>`__).
|
||||
`Pull Request 11662`_
|
||||
* Single User Mode - Disable irrelevant and broken options
|
||||
`Pull Request 11669`_
|
||||
* Swap 'Analyze Data' to home icon
|
||||
`Pull Request 11674`_
|
||||
* Bugfix/11476/disabled upload button explanation
|
||||
(thanks to `@assuntad23 <https://github.com/assuntad23>`__).
|
||||
`Pull Request 11682`_
|
||||
* Break up dynamic dataset collection into chunks
|
||||
`Pull Request 11697`_
|
||||
* enable the S3 plugin to use non-AWS resrouces
|
||||
(thanks to `@bgruening <https://github.com/bgruening>`__).
|
||||
`Pull Request 11703`_
|
||||
* Implement selenium tests for exporting library datasets to history collections.
|
||||
(thanks to `@OlegZharkov <https://github.com/OlegZharkov>`__).
|
||||
`Pull Request 11716`_
|
||||
* lint for checkboxes select
|
||||
(thanks to `@bernt-matthias <https://github.com/bernt-matthias>`__).
|
||||
`Pull Request 11727`_
|
||||
* Refactor stdout/stderr in Job Information
|
||||
(thanks to `@OlegZharkov <https://github.com/OlegZharkov>`__).
|
||||
`Pull Request 11731`_
|
||||
* Copy collections dbkey
|
||||
(thanks to `@assuntad23 <https://github.com/assuntad23>`__).
|
||||
`Pull Request 11732`_
|
||||
* Fix CI docs build for feature branches
|
||||
(thanks to `@nsoranzo <https://github.com/nsoranzo>`__).
|
||||
`Pull Request 11740`_
|
||||
* Updated Code of Conduct to point to the exact copy of this CoC on the hub.
|
||||
`Pull Request 11750`_
|
||||
* Allow AWS s3 access for ec2 instances without hardcoding credentials
|
||||
(thanks to `@crashGoBoom <https://github.com/crashGoBoom>`__).
|
||||
`Pull Request 11757`_
|
||||
* Add an explicit statement of assent to licensing to the pull request template
|
||||
`Pull Request 11777`_
|
||||
* Fixes for installed Galaxy
|
||||
`Pull Request 11779`_
|
||||
* Update Python dependencies
|
||||
`Pull Request 11782`_
|
||||
* Handle deprecated postgresql db urls; update postgres version in ci
|
||||
`Pull Request 11790`_
|
||||
* Update localisation options to include Español
|
||||
(thanks to `@hexylena <https://github.com/hexylena>`__).
|
||||
`Pull Request 11791`_
|
||||
* Open update deps PRs from galaxybot's fork
|
||||
(thanks to `@nsoranzo <https://github.com/nsoranzo>`__).
|
||||
`Pull Request 11795`_
|
||||
* Make k8s container 39 MB smaller by using vim-tiny
|
||||
(thanks to `@rhpvorderman <https://github.com/rhpvorderman>`__).
|
||||
`Pull Request 11826`_
|
||||
* Make tool parameter options capable of referring to metadata file
|
||||
(thanks to `@qiagu <https://github.com/qiagu>`__).
|
||||
`Pull Request 11832`_
|
||||
* Restore triggers dropped in `#10821 <https://github.com/galaxyproject/galaxy/issues/10821>`__
|
||||
(thanks to `@nsoranzo <https://github.com/nsoranzo>`__).
|
||||
`Pull Request 11843`_
|
||||
* Do not invoke workflow if not all tools are available
|
||||
(thanks to `@simonbray <https://github.com/simonbray>`__).
|
||||
`Pull Request 11844`_
|
||||
* Improve error handling when creating a new History with the master API key
|
||||
(thanks to `@davelopez <https://github.com/davelopez>`__).
|
||||
`Pull Request 11846`_
|
||||
* Expose StoredWorkflowId in invocation API
|
||||
(thanks to `@simonbray <https://github.com/simonbray>`__).
|
||||
`Pull Request 11871`_
|
||||
* Create FastAPI entry points for Tool Shed and Reports
|
||||
(thanks to `@davelopez <https://github.com/davelopez>`__).
|
||||
`Pull Request 11872`_
|
||||
* Rev mypy.
|
||||
`Pull Request 11877`_
|
||||
* Backport `#11871 <https://github.com/galaxyproject/galaxy/issues/11871>`__
|
||||
(thanks to `@scholtalbers <https://github.com/scholtalbers>`__).
|
||||
`Pull Request 11881`_
|
||||
* Allow to filter /api/invocations by job_id
|
||||
(thanks to `@scholtalbers <https://github.com/scholtalbers>`__).
|
||||
`Pull Request 11882`_
|
||||
* Complete Spanish language version
|
||||
(thanks to `@nomadscientist <https://github.com/nomadscientist>`__).
|
||||
`Pull Request 11891`_
|
||||
* Add subpathing to k8s_persistent_volume_claims
|
||||
(thanks to `@anvilproject <https://github.com/anvilproject>`__).
|
||||
`Pull Request 11899`_
|
||||
* Make _metadata regular JSONType field
|
||||
`Pull Request 11902`_
|
||||
* Abstraction for fetching qualified app URL across webapp types
|
||||
`Pull Request 11904`_
|
||||
* Add ``delete account`` selenium test
|
||||
(thanks to `@OlegZharkov <https://github.com/OlegZharkov>`__).
|
||||
`Pull Request 11905`_
|
||||
* Update framework dependencies
|
||||
`Pull Request 11907`_
|
||||
* expose copied_from_ldda_id on dataset api endpoint
|
||||
(thanks to `@scholtalbers <https://github.com/scholtalbers>`__).
|
||||
`Pull Request 11922`_
|
||||
.. small_enhancement
|
||||
|
||||
* Fix remaining issues reported by bugbear; add it to flake8 reqs
|
||||
(thanks to `@nsoranzo <https://github.com/nsoranzo>`__).
|
||||
`Pull Request 11153`_
|
||||
* Fix all E203, E741 and W504 flake8 errors
|
||||
(thanks to `@nsoranzo <https://github.com/nsoranzo>`__).
|
||||
`Pull Request 11155`_
|
||||
* Remove unused TS methods.
|
||||
`Pull Request 11179`_
|
||||
* Remove some seemingly unused cruft in GalaxyWebTransaction
|
||||
`Pull Request 11234`_
|
||||
* Drop unused transfer_manager.py
|
||||
`Pull Request 11238`_
|
||||
* Get rid of legacy decorator in api/tours
|
||||
`Pull Request 11253`_
|
||||
* Update vscode dev instructions, drop helper script
|
||||
`Pull Request 11258`_
|
||||
* Replace $.isArray with Array prototype check
|
||||
`Pull Request 11264`_
|
||||
* Drop docker testing image
|
||||
`Pull Request 11329`_
|
||||
* Renamed virtualscroller since it is no longer virtual
|
||||
`Pull Request 11331`_
|
||||
* Dataset lib permissions Vue rewrite
|
||||
(thanks to `@OlegZharkov <https://github.com/OlegZharkov>`__).
|
||||
`Pull Request 11347`_
|
||||
* Refactor libraries API logic into LibrariesManager
|
||||
(thanks to `@davelopez <https://github.com/davelopez>`__).
|
||||
`Pull Request 11359`_
|
||||
* Refactor display_applications API logic into DisplayApplicationsManager
|
||||
(thanks to `@davelopez <https://github.com/davelopez>`__).
|
||||
`Pull Request 11386`_
|
||||
* Repair styleguide
|
||||
`Pull Request 11404`_
|
||||
* Refactor groups API logic into GroupsManager
|
||||
(thanks to `@davelopez <https://github.com/davelopez>`__).
|
||||
`Pull Request 11412`_
|
||||
* Refactor group_roles API logic into GroupRolesManager
|
||||
(thanks to `@davelopez <https://github.com/davelopez>`__).
|
||||
`Pull Request 11417`_
|
||||
* Refactor group_users API logic into GroupUsersManager
|
||||
(thanks to `@davelopez <https://github.com/davelopez>`__).
|
||||
`Pull Request 11418`_
|
||||
* Pin mypy to 0.790 to prevent linting errors when running v 0.8
|
||||
`Pull Request 11422`_
|
||||
* Use galaxy Router instead of InferringRouter
|
||||
(thanks to `@davelopez <https://github.com/davelopez>`__).
|
||||
`Pull Request 11591`_
|
||||
* Front-end Library Routing refactor
|
||||
(thanks to `@OlegZharkov <https://github.com/OlegZharkov>`__).
|
||||
`Pull Request 11614`_
|
||||
* Remove unused `TraceLogger` class
|
||||
(thanks to `@nsoranzo <https://github.com/nsoranzo>`__).
|
||||
`Pull Request 11616`_
|
||||
* Refactor library folder API logic into FoldersService
|
||||
(thanks to `@davelopez <https://github.com/davelopez>`__).
|
||||
`Pull Request 11631`_
|
||||
* Rewrite Library Permissions
|
||||
(thanks to `@OlegZharkov <https://github.com/OlegZharkov>`__).
|
||||
`Pull Request 11637`_
|
||||
* Fix prop mutation in FolderTopBar
|
||||
(thanks to `@OlegZharkov <https://github.com/OlegZharkov>`__).
|
||||
`Pull Request 11638`_
|
||||
* Refactor library folder contents api
|
||||
(thanks to `@davelopez <https://github.com/davelopez>`__).
|
||||
`Pull Request 11686`_
|
||||
* Update Python dependencies
|
||||
`Pull Request 11702`_
|
||||
* Partial refactor ShareableMixin into ShareableService
|
||||
(thanks to `@davelopez <https://github.com/davelopez>`__).
|
||||
`Pull Request 11712`_
|
||||
* Incorporate changes from Pulsar's copy of galaxy.jobs.runners.util
|
||||
`Pull Request 11810`_
|
||||
* Separate tests for "remote" and "remote + extended" metadata.
|
||||
`Pull Request 11840`_
|
||||
* Unify security decode id exceptions
|
||||
(thanks to `@davelopez <https://github.com/davelopez>`__).
|
||||
`Pull Request 11856`_
|
||||
* Optimized beta history polling by leveraging history.update_time + loading behavior bug fixes
|
||||
`Pull Request 11884`_
|
||||
* Eslint tweaks
|
||||
`Pull Request 11925`_
|
||||
|
||||
|
||||
Fixes
|
||||
-------------------------------
|
||||
|
||||
.. major_bug
|
||||
|
||||
|
||||
.. bug_tag_viz
|
||||
|
||||
* Shared visualization display fix
|
||||
`Pull Request 11906`_
|
||||
.. bug_tag_datatypes
|
||||
|
||||
* remove duplicated qcml from datatypes_conf sample
|
||||
(thanks to `@bernt-matthias <https://github.com/bernt-matthias>`__).
|
||||
`Pull Request 11378`_
|
||||
* Limit max column in tabular dataset preview
|
||||
`Pull Request 11901`_
|
||||
* Use keep_original in pysam.tabix_index to not remove original data
|
||||
`Pull Request 11913`_
|
||||
.. bug_tag_tools
|
||||
|
||||
* Resolve session problems, enabled pages and tags fastAPI routes
|
||||
`Pull Request 11342`_
|
||||
* Make filter work with file containing header
|
||||
(thanks to `@bernt-matthias <https://github.com/bernt-matthias>`__).
|
||||
`Pull Request 11365`_
|
||||
.. bug_tag_workflows
|
||||
|
||||
* Workflow editor null/zero fixes
|
||||
`Pull Request 11265`_
|
||||
* Fix reconnecting terminals
|
||||
`Pull Request 11660`_
|
||||
* Fix tags not included when importing shared workflow
|
||||
(thanks to `@davelopez <https://github.com/davelopez>`__).
|
||||
`Pull Request 11663`_
|
||||
* Fix workflow rename dropping metadata.
|
||||
`Pull Request 11670`_
|
||||
* Use Modal to show wrong RuntimeValue
|
||||
`Pull Request 11678`_
|
||||
* Ensure new outputs have correct mapOver state
|
||||
`Pull Request 11683`_
|
||||
* Redraw connections when adding or removing inputs
|
||||
`Pull Request 11684`_
|
||||
* Fix displaying data column parameters in workflow editor
|
||||
`Pull Request 11692`_
|
||||
* Fix workflow refactor schema parsing for pydantic 1.8.
|
||||
`Pull Request 11778`_
|
||||
.. bug_tag_ui
|
||||
|
||||
* Remove filter from list:paired element names when filter is not _1
|
||||
`Pull Request 11486`_
|
||||
* Beta history current history mismatch with legacy code.
|
||||
`Pull Request 11850`_
|
||||
* Reposition history scroller during new updates
|
||||
`Pull Request 11879`_
|
||||
.. bug_tag_jobs
|
||||
|
||||
* Fix mule job messaging
|
||||
`Pull Request 11148`_
|
||||
* Deal with empty claim names in k8s runner
|
||||
(thanks to `@nuwang <https://github.com/nuwang>`__).
|
||||
`Pull Request 11223`_
|
||||
* Fix SLURM runner for real user setups and avoid uneccesary chowns
|
||||
(thanks to `@bernt-matthias <https://github.com/bernt-matthias>`__).
|
||||
`Pull Request 11403`_
|
||||
* Prevent endless fail_job cycles
|
||||
`Pull Request 11673`_
|
||||
* Fix value of 'unknown_error' resubmit condition variable
|
||||
(thanks to `@brinkmanlab <https://github.com/brinkmanlab>`__).
|
||||
`Pull Request 11749`_
|
||||
* Pulsar: mark cancelled jobs as finished
|
||||
(thanks to `@abretaud <https://github.com/abretaud>`__).
|
||||
`Pull Request 11763`_
|
||||
* Lower tool id case while populating resource params
|
||||
(thanks to `@eancelet <https://github.com/eancelet>`__).
|
||||
`Pull Request 11793`_
|
||||
* Don't overwrite $GALAXY_MEMORY_MB if it's already set
|
||||
`Pull Request 11808`_
|
||||
* Transfer fewer unneeded files back to Galaxy when using remote extended metadata with Pulsar.
|
||||
`Pull Request 11814`_
|
||||
* Don't write job and job-related attributes when creating export model
|
||||
`Pull Request 11815`_
|
||||
* Handle resubmission before changing job state in CLI runner
|
||||
(thanks to `@pcm32 <https://github.com/pcm32>`__).
|
||||
`Pull Request 11886`_
|
||||
.. bug_tag_admin
|
||||
|
||||
* fix broken docs links
|
||||
`Pull Request 11384`_
|
||||
* Add missing ssl keyword in nginx example [docs]
|
||||
(thanks to `@rhpvorderman <https://github.com/rhpvorderman>`__).
|
||||
`Pull Request 11633`_
|
||||
.. bug
|
||||
|
||||
* Beta History: implement missing advanced search filters
|
||||
`Pull Request 10972`_
|
||||
* Fix mypy error with Union in response_model
|
||||
(thanks to `@davelopez <https://github.com/davelopez>`__).
|
||||
`Pull Request 11132`_
|
||||
* Minor spelling error fix
|
||||
(thanks to `@selten <https://github.com/selten>`__).
|
||||
`Pull Request 11135`_
|
||||
* Fix permission in user dir library import
|
||||
(thanks to `@OlegZharkov <https://github.com/OlegZharkov>`__).
|
||||
`Pull Request 11137`_
|
||||
* fix error message
|
||||
(thanks to `@bernt-matthias <https://github.com/bernt-matthias>`__).
|
||||
`Pull Request 11157`_
|
||||
* changing tooltip to match functionality
|
||||
(thanks to `@assuntad23 <https://github.com/assuntad23>`__).
|
||||
`Pull Request 11204`_
|
||||
* Copy only dataset tags in Extract Dataset tool
|
||||
(thanks to `@pvanheus <https://github.com/pvanheus>`__).
|
||||
`Pull Request 11206`_
|
||||
* Fix regression of 'disabled' masthead items.
|
||||
`Pull Request 11215`_
|
||||
* fix `test_user_library_import_dir_warning`
|
||||
(thanks to `@OlegZharkov <https://github.com/OlegZharkov>`__).
|
||||
`Pull Request 11226`_
|
||||
* Make OIDC email matching case-insensitive
|
||||
(thanks to `@selten <https://github.com/selten>`__).
|
||||
`Pull Request 11251`_
|
||||
* Tool XML container requirements: fix example
|
||||
(thanks to `@selten <https://github.com/selten>`__).
|
||||
`Pull Request 11271`_
|
||||
* Bugfix/8488/rule builder fails for one bad url
|
||||
(thanks to `@assuntad23 <https://github.com/assuntad23>`__).
|
||||
`Pull Request 11276`_
|
||||
* Fix printing non-dict output in api/display script
|
||||
`Pull Request 11278`_
|
||||
* Fix images in workflow PDF report
|
||||
(thanks to `@OlegZharkov <https://github.com/OlegZharkov>`__).
|
||||
`Pull Request 11296`_
|
||||
* consider collections in all tests
|
||||
(thanks to `@bernt-matthias <https://github.com/bernt-matthias>`__).
|
||||
`Pull Request 11313`_
|
||||
* Replace Query with Path
|
||||
`Pull Request 11320`_
|
||||
* Custos `aud` handling fix
|
||||
`Pull Request 11322`_
|
||||
* Get latest pull request labels in maintenance bot
|
||||
(thanks to `@nsoranzo <https://github.com/nsoranzo>`__).
|
||||
`Pull Request 11326`_
|
||||
* Update OIDC links
|
||||
(thanks to `@selten <https://github.com/selten>`__).
|
||||
`Pull Request 11362`_
|
||||
* fix profile logic for configfile generation
|
||||
(thanks to `@bernt-matthias <https://github.com/bernt-matthias>`__).
|
||||
`Pull Request 11380`_
|
||||
* Standardise tool param attribute docs
|
||||
(thanks to `@nsoranzo <https://github.com/nsoranzo>`__).
|
||||
`Pull Request 11390`_
|
||||
* Run maintainance bot on ready_for_review and edit
|
||||
`Pull Request 11400`_
|
||||
* Decrease verbosity of messages in poetry
|
||||
`Pull Request 11405`_
|
||||
* Rename fixtures to fix test database object name conflict
|
||||
`Pull Request 11424`_
|
||||
* Check for binary files at the middle of the file instead of at the beginning
|
||||
(thanks to `@pcm32 <https://github.com/pcm32>`__).
|
||||
`Pull Request 11425`_
|
||||
* Set default USE_UVICORN to true only on python >= 3.7
|
||||
`Pull Request 11454`_
|
||||
* Fix galaxy.files.sources plugin unit tests being missed by CI.
|
||||
`Pull Request 11469`_
|
||||
* Fix exception handling in datasets display API.
|
||||
`Pull Request 11482`_
|
||||
* Mark some tool reload tests as expected to fail
|
||||
(thanks to `@davelopez <https://github.com/davelopez>`__).
|
||||
`Pull Request 11496`_
|
||||
* Fix clearing of search inputs
|
||||
`Pull Request 11526`_
|
||||
* Fix bug with Pulsar and $__tool_directory__
|
||||
(thanks to `@abretaud <https://github.com/abretaud>`__).
|
||||
`Pull Request 11599`_
|
||||
* Allow any extra field in Pages API
|
||||
(thanks to `@davelopez <https://github.com/davelopez>`__).
|
||||
`Pull Request 11600`_
|
||||
* Fix workflow labelling
|
||||
`Pull Request 11604`_
|
||||
* Pin refgenconf to <0.10.0
|
||||
(thanks to `@nsoranzo <https://github.com/nsoranzo>`__).
|
||||
`Pull Request 11627`_
|
||||
* Pin SQAlchemy to <1.4.0
|
||||
`Pull Request 11629`_
|
||||
* Change Upload button tooltip position
|
||||
(thanks to `@OlegZharkov <https://github.com/OlegZharkov>`__).
|
||||
`Pull Request 11634`_
|
||||
* Set minimum requirements for starlette-context and fastapi
|
||||
`Pull Request 11643`_
|
||||
* Match environment variable set up by doc building workflow
|
||||
`Pull Request 11646`_
|
||||
* Don't check for missing `kind/` label for `minor` merged PRs
|
||||
(thanks to `@nsoranzo <https://github.com/nsoranzo>`__).
|
||||
`Pull Request 11647`_
|
||||
* Library folder_contents API tests + small fixes
|
||||
(thanks to `@davelopez <https://github.com/davelopez>`__).
|
||||
`Pull Request 11650`_
|
||||
* Refactor default mounting of $tmp_directory in containers
|
||||
(thanks to `@brinkmanlab <https://github.com/brinkmanlab>`__).
|
||||
`Pull Request 11654`_
|
||||
* Fix datatype defined column name display
|
||||
`Pull Request 11664`_
|
||||
* Expose command line if expose_dataset_path is set
|
||||
`Pull Request 11687`_
|
||||
* Hotfix/paired list builder from data library
|
||||
(thanks to `@assuntad23 <https://github.com/assuntad23>`__).
|
||||
`Pull Request 11700`_
|
||||
* Make extra user preferences behave like defaultdict
|
||||
`Pull Request 11708`_
|
||||
* Fix importing collections to new history and import correct elements
|
||||
`Pull Request 11718`_
|
||||
* Removedreference to remove-extensions
|
||||
(thanks to `@assuntad23 <https://github.com/assuntad23>`__).
|
||||
`Pull Request 11724`_
|
||||
* Refgenie table del
|
||||
(thanks to `@abretaud <https://github.com/abretaud>`__).
|
||||
`Pull Request 11728`_
|
||||
* Fix job filtering by `date_range_max` / `date_range_mix`
|
||||
(thanks to `@nsoranzo <https://github.com/nsoranzo>`__).
|
||||
`Pull Request 11736`_
|
||||
* Fix a bug when unzipping collections with nametags.
|
||||
`Pull Request 11741`_
|
||||
* Fix API job filtering by workflow or invocation
|
||||
(thanks to `@nsoranzo <https://github.com/nsoranzo>`__).
|
||||
`Pull Request 11751`_
|
||||
* Assorted tool shed fixes
|
||||
`Pull Request 11762`_
|
||||
* Fix format="input" with implicit conversions
|
||||
`Pull Request 11764`_
|
||||
* galaxy.webapps.tool_shed to webapp.tool_shed
|
||||
(thanks to `@almahmoud <https://github.com/almahmoud>`__).
|
||||
`Pull Request 11765`_
|
||||
* Fix auto-pair naming in list paired creator.
|
||||
`Pull Request 11773`_
|
||||
* Fix library scrolling
|
||||
`Pull Request 11776`_
|
||||
* Use `assertRaisesRegex()` to fix new B017 linting errors
|
||||
(thanks to `@nsoranzo <https://github.com/nsoranzo>`__).
|
||||
`Pull Request 11783`_
|
||||
* Fix typo in `upstream_mod_zip` admin docs
|
||||
(thanks to `@nsoranzo <https://github.com/nsoranzo>`__).
|
||||
`Pull Request 11794`_
|
||||
* Fix tool profile details in schema docs
|
||||
(thanks to `@nsoranzo <https://github.com/nsoranzo>`__).
|
||||
`Pull Request 11798`_
|
||||
* Activate virtualenv in `updateucsc.sh.sample`
|
||||
(thanks to `@nsoranzo <https://github.com/nsoranzo>`__).
|
||||
`Pull Request 11800`_
|
||||
* Backport `#11815 <https://github.com/galaxyproject/galaxy/issues/11815>`__: Don't write job and job-related attributes when creating export model
|
||||
`Pull Request 11816`_
|
||||
* do not chown pasted urls
|
||||
(thanks to `@bernt-matthias <https://github.com/bernt-matthias>`__).
|
||||
`Pull Request 11818`_
|
||||
* Fixed uploader link on tool list and legacy empty history message
|
||||
`Pull Request 11830`_
|
||||
* Join QueueWorker thread
|
||||
`Pull Request 11835`_
|
||||
* Patch to click the button which should be more stable
|
||||
(thanks to `@hexylena <https://github.com/hexylena>`__).
|
||||
`Pull Request 11838`_
|
||||
* fix data stickiness on folder change
|
||||
(thanks to `@OlegZharkov <https://github.com/OlegZharkov>`__).
|
||||
`Pull Request 11845`_
|
||||
* BUGFIX: Also check for boolean True, not just string 'True' when evaluating conditional dependencies.
|
||||
(thanks to `@rhpvorderman <https://github.com/rhpvorderman>`__).
|
||||
`Pull Request 11861`_
|
||||
* Fix ``Delete account`` visibility
|
||||
`Pull Request 11897`_
|
||||
* Fix S3 backend support in iRODS object store
|
||||
(thanks to `@kxk302 <https://github.com/kxk302>`__).
|
||||
`Pull Request 11910`_
|
||||
* fix GalaxyInteractorApi get_tool_tests
|
||||
(thanks to `@cat-bro <https://github.com/cat-bro>`__).
|
||||
`Pull Request 11911`_
|
||||
* Stabilize test_history_options selenium test
|
||||
`Pull Request 11918`_
|
||||
* update legacy_framework.grids.StateColumn (bug fix)
|
||||
(thanks to `@cat-bro <https://github.com/cat-bro>`__).
|
||||
`Pull Request 11923`_
|
||||
|
||||
.. include:: 21.05_prs.rst
|
||||
|
||||
@@ -0,0 +1,12 @@
|
||||
|
||||
:orphan:
|
||||
|
||||
===========================================================
|
||||
May 2021 Galaxy Release (v 21.05)
|
||||
===========================================================
|
||||
|
||||
|
||||
Schedule
|
||||
===========================================================
|
||||
* Planned Freeze Date: 2021-05-03
|
||||
* Planned Release Date: 2021-05-24
|
||||
@@ -0,0 +1,129 @@
|
||||
|
||||
===========================================================
|
||||
May 2021 Galaxy Release (v 21.05)
|
||||
===========================================================
|
||||
|
||||
.. include:: _header.rst
|
||||
|
||||
Highlights
|
||||
===========================================================
|
||||
|
||||
**Feature1**
|
||||
Feature description.
|
||||
|
||||
**Feature2**
|
||||
Feature description.
|
||||
|
||||
**Feature3**
|
||||
Feature description.
|
||||
|
||||
|
||||
New Visualizations
|
||||
===========================================================
|
||||
|
||||
.. visualizations
|
||||
* Migrate api/genomes to fastapi
|
||||
`Pull Request 11241`_
|
||||
* Shared visualization display fix
|
||||
`Pull Request 11906`_
|
||||
|
||||
New Datatypes
|
||||
===========================================================
|
||||
|
||||
.. datatypes
|
||||
* Add FlowCytometry and MetaCyto datatypes
|
||||
(thanks to `@pcm32 <https://github.com/pcm32>`__).
|
||||
`Pull Request 9807`_
|
||||
* Add FastAPI routes for datatypes
|
||||
(thanks to `@davelopez <https://github.com/davelopez>`__).
|
||||
`Pull Request 11098`_
|
||||
* Fix remaining issues reported by bugbear; add it to flake8 reqs
|
||||
(thanks to `@nsoranzo <https://github.com/nsoranzo>`__).
|
||||
`Pull Request 11153`_
|
||||
* Add mrc datatype (and Python dependency)
|
||||
(thanks to `@gregvonkuster <https://github.com/gregvonkuster>`__).
|
||||
`Pull Request 11220`_
|
||||
* remove duplicated qcml from datatypes_conf sample
|
||||
(thanks to `@bernt-matthias <https://github.com/bernt-matthias>`__).
|
||||
`Pull Request 11378`_
|
||||
* Refactor display_applications API logic into DisplayApplicationsManager
|
||||
(thanks to `@davelopez <https://github.com/davelopez>`__).
|
||||
`Pull Request 11386`_
|
||||
* Merge release_21.01 -> dev
|
||||
`Pull Request 11394`_
|
||||
* Add HHR datatype
|
||||
(thanks to `@bgruening <https://github.com/bgruening>`__).
|
||||
`Pull Request 11661`_
|
||||
* add meryldb datatype
|
||||
(thanks to `@bgruening <https://github.com/bgruening>`__).
|
||||
`Pull Request 11694`_
|
||||
* Merge 20.09 into dev
|
||||
`Pull Request 11711`_
|
||||
* Add datatype for PretextMap output
|
||||
`Pull Request 11747`_
|
||||
* add new datatype class for meryldb
|
||||
(thanks to `@bgruening <https://github.com/bgruening>`__).
|
||||
`Pull Request 11758`_
|
||||
* Make Avivator GEDA and sniffer for ome.tiff datatype
|
||||
(thanks to `@qiagu <https://github.com/qiagu>`__).
|
||||
`Pull Request 11801`_
|
||||
* jellyfish db datatype
|
||||
(thanks to `@astrovsky01 <https://github.com/astrovsky01>`__).
|
||||
`Pull Request 11802`_
|
||||
* add new datatype JPEG 2000 in Galaxy
|
||||
(thanks to `@annefou <https://github.com/annefou>`__).
|
||||
`Pull Request 11812`_
|
||||
* Make datatype h5_model for machine leaning models
|
||||
(thanks to `@qiagu <https://github.com/qiagu>`__).
|
||||
`Pull Request 11825`_
|
||||
* Add support for the Relion STAR data format
|
||||
(thanks to `@gregvonkuster <https://github.com/gregvonkuster>`__).
|
||||
`Pull Request 11831`_
|
||||
* add minerva display app for covid
|
||||
(thanks to `@hexylena <https://github.com/hexylena>`__).
|
||||
`Pull Request 11880`_
|
||||
* Limit max column in tabular dataset preview
|
||||
`Pull Request 11901`_
|
||||
* Add toml datatype
|
||||
(thanks to `@jj-umn <https://github.com/jj-umn>`__).
|
||||
`Pull Request 11909`_
|
||||
* Use keep_original in pysam.tabix_index to not remove original data
|
||||
`Pull Request 11913`_
|
||||
|
||||
Builtin Tool Updates
|
||||
===========================================================
|
||||
|
||||
.. tools
|
||||
* Fix remaining issues reported by bugbear; add it to flake8 reqs
|
||||
(thanks to `@nsoranzo <https://github.com/nsoranzo>`__).
|
||||
`Pull Request 11153`_
|
||||
* Resolve session problems, enabled pages and tags fastAPI routes
|
||||
`Pull Request 11342`_
|
||||
* Make filter work with file containing header
|
||||
(thanks to `@bernt-matthias <https://github.com/bernt-matthias>`__).
|
||||
`Pull Request 11365`_
|
||||
* Add the SimText shiny app as Interactive Tool
|
||||
(thanks to `@dlal-group <https://github.com/dlal-group>`__).
|
||||
`Pull Request 11680`_
|
||||
* grep, tail, head: add option to keep header
|
||||
(thanks to `@bernt-matthias <https://github.com/bernt-matthias>`__).
|
||||
`Pull Request 11859`_
|
||||
* add a bit of docs to the add tags tool
|
||||
(thanks to `@bernt-matthias <https://github.com/bernt-matthias>`__).
|
||||
`Pull Request 11874`_
|
||||
|
||||
Release Testing Team
|
||||
===========================================================
|
||||
|
||||
A special thanks to the release testing team for testing many of the new features and reporting many bugs:
|
||||
|
||||
<team members go here>
|
||||
|
||||
Release Notes
|
||||
===========================================================
|
||||
|
||||
Please see the `full release notes <21.05_announce.html>`_ for more details.
|
||||
|
||||
.. include:: 21.05_prs.rst
|
||||
|
||||
.. include:: _thanks.rst
|
||||
@@ -0,0 +1,319 @@
|
||||
|
||||
.. github_links
|
||||
.. _Pull Request 9807: https://github.com/galaxyproject/galaxy/pull/9807
|
||||
.. _Pull Request 10117: https://github.com/galaxyproject/galaxy/pull/10117
|
||||
.. _Pull Request 10222: https://github.com/galaxyproject/galaxy/pull/10222
|
||||
.. _Pull Request 10347: https://github.com/galaxyproject/galaxy/pull/10347
|
||||
.. _Pull Request 10496: https://github.com/galaxyproject/galaxy/pull/10496
|
||||
.. _Pull Request 10810: https://github.com/galaxyproject/galaxy/pull/10810
|
||||
.. _Pull Request 10972: https://github.com/galaxyproject/galaxy/pull/10972
|
||||
.. _Pull Request 11089: https://github.com/galaxyproject/galaxy/pull/11089
|
||||
.. _Pull Request 11098: https://github.com/galaxyproject/galaxy/pull/11098
|
||||
.. _Pull Request 11107: https://github.com/galaxyproject/galaxy/pull/11107
|
||||
.. _Pull Request 11111: https://github.com/galaxyproject/galaxy/pull/11111
|
||||
.. _Pull Request 11113: https://github.com/galaxyproject/galaxy/pull/11113
|
||||
.. _Pull Request 11115: https://github.com/galaxyproject/galaxy/pull/11115
|
||||
.. _Pull Request 11116: https://github.com/galaxyproject/galaxy/pull/11116
|
||||
.. _Pull Request 11121: https://github.com/galaxyproject/galaxy/pull/11121
|
||||
.. _Pull Request 11122: https://github.com/galaxyproject/galaxy/pull/11122
|
||||
.. _Pull Request 11124: https://github.com/galaxyproject/galaxy/pull/11124
|
||||
.. _Pull Request 11126: https://github.com/galaxyproject/galaxy/pull/11126
|
||||
.. _Pull Request 11128: https://github.com/galaxyproject/galaxy/pull/11128
|
||||
.. _Pull Request 11132: https://github.com/galaxyproject/galaxy/pull/11132
|
||||
.. _Pull Request 11135: https://github.com/galaxyproject/galaxy/pull/11135
|
||||
.. _Pull Request 11137: https://github.com/galaxyproject/galaxy/pull/11137
|
||||
.. _Pull Request 11138: https://github.com/galaxyproject/galaxy/pull/11138
|
||||
.. _Pull Request 11142: https://github.com/galaxyproject/galaxy/pull/11142
|
||||
.. _Pull Request 11148: https://github.com/galaxyproject/galaxy/pull/11148
|
||||
.. _Pull Request 11153: https://github.com/galaxyproject/galaxy/pull/11153
|
||||
.. _Pull Request 11155: https://github.com/galaxyproject/galaxy/pull/11155
|
||||
.. _Pull Request 11156: https://github.com/galaxyproject/galaxy/pull/11156
|
||||
.. _Pull Request 11157: https://github.com/galaxyproject/galaxy/pull/11157
|
||||
.. _Pull Request 11160: https://github.com/galaxyproject/galaxy/pull/11160
|
||||
.. _Pull Request 11167: https://github.com/galaxyproject/galaxy/pull/11167
|
||||
.. _Pull Request 11173: https://github.com/galaxyproject/galaxy/pull/11173
|
||||
.. _Pull Request 11176: https://github.com/galaxyproject/galaxy/pull/11176
|
||||
.. _Pull Request 11177: https://github.com/galaxyproject/galaxy/pull/11177
|
||||
.. _Pull Request 11178: https://github.com/galaxyproject/galaxy/pull/11178
|
||||
.. _Pull Request 11179: https://github.com/galaxyproject/galaxy/pull/11179
|
||||
.. _Pull Request 11180: https://github.com/galaxyproject/galaxy/pull/11180
|
||||
.. _Pull Request 11188: https://github.com/galaxyproject/galaxy/pull/11188
|
||||
.. _Pull Request 11192: https://github.com/galaxyproject/galaxy/pull/11192
|
||||
.. _Pull Request 11197: https://github.com/galaxyproject/galaxy/pull/11197
|
||||
.. _Pull Request 11198: https://github.com/galaxyproject/galaxy/pull/11198
|
||||
.. _Pull Request 11202: https://github.com/galaxyproject/galaxy/pull/11202
|
||||
.. _Pull Request 11203: https://github.com/galaxyproject/galaxy/pull/11203
|
||||
.. _Pull Request 11204: https://github.com/galaxyproject/galaxy/pull/11204
|
||||
.. _Pull Request 11206: https://github.com/galaxyproject/galaxy/pull/11206
|
||||
.. _Pull Request 11211: https://github.com/galaxyproject/galaxy/pull/11211
|
||||
.. _Pull Request 11214: https://github.com/galaxyproject/galaxy/pull/11214
|
||||
.. _Pull Request 11215: https://github.com/galaxyproject/galaxy/pull/11215
|
||||
.. _Pull Request 11217: https://github.com/galaxyproject/galaxy/pull/11217
|
||||
.. _Pull Request 11219: https://github.com/galaxyproject/galaxy/pull/11219
|
||||
.. _Pull Request 11220: https://github.com/galaxyproject/galaxy/pull/11220
|
||||
.. _Pull Request 11223: https://github.com/galaxyproject/galaxy/pull/11223
|
||||
.. _Pull Request 11224: https://github.com/galaxyproject/galaxy/pull/11224
|
||||
.. _Pull Request 11226: https://github.com/galaxyproject/galaxy/pull/11226
|
||||
.. _Pull Request 11227: https://github.com/galaxyproject/galaxy/pull/11227
|
||||
.. _Pull Request 11228: https://github.com/galaxyproject/galaxy/pull/11228
|
||||
.. _Pull Request 11230: https://github.com/galaxyproject/galaxy/pull/11230
|
||||
.. _Pull Request 11232: https://github.com/galaxyproject/galaxy/pull/11232
|
||||
.. _Pull Request 11234: https://github.com/galaxyproject/galaxy/pull/11234
|
||||
.. _Pull Request 11235: https://github.com/galaxyproject/galaxy/pull/11235
|
||||
.. _Pull Request 11238: https://github.com/galaxyproject/galaxy/pull/11238
|
||||
.. _Pull Request 11240: https://github.com/galaxyproject/galaxy/pull/11240
|
||||
.. _Pull Request 11241: https://github.com/galaxyproject/galaxy/pull/11241
|
||||
.. _Pull Request 11251: https://github.com/galaxyproject/galaxy/pull/11251
|
||||
.. _Pull Request 11253: https://github.com/galaxyproject/galaxy/pull/11253
|
||||
.. _Pull Request 11258: https://github.com/galaxyproject/galaxy/pull/11258
|
||||
.. _Pull Request 11259: https://github.com/galaxyproject/galaxy/pull/11259
|
||||
.. _Pull Request 11262: https://github.com/galaxyproject/galaxy/pull/11262
|
||||
.. _Pull Request 11264: https://github.com/galaxyproject/galaxy/pull/11264
|
||||
.. _Pull Request 11265: https://github.com/galaxyproject/galaxy/pull/11265
|
||||
.. _Pull Request 11267: https://github.com/galaxyproject/galaxy/pull/11267
|
||||
.. _Pull Request 11271: https://github.com/galaxyproject/galaxy/pull/11271
|
||||
.. _Pull Request 11272: https://github.com/galaxyproject/galaxy/pull/11272
|
||||
.. _Pull Request 11274: https://github.com/galaxyproject/galaxy/pull/11274
|
||||
.. _Pull Request 11276: https://github.com/galaxyproject/galaxy/pull/11276
|
||||
.. _Pull Request 11278: https://github.com/galaxyproject/galaxy/pull/11278
|
||||
.. _Pull Request 11292: https://github.com/galaxyproject/galaxy/pull/11292
|
||||
.. _Pull Request 11296: https://github.com/galaxyproject/galaxy/pull/11296
|
||||
.. _Pull Request 11300: https://github.com/galaxyproject/galaxy/pull/11300
|
||||
.. _Pull Request 11304: https://github.com/galaxyproject/galaxy/pull/11304
|
||||
.. _Pull Request 11307: https://github.com/galaxyproject/galaxy/pull/11307
|
||||
.. _Pull Request 11313: https://github.com/galaxyproject/galaxy/pull/11313
|
||||
.. _Pull Request 11319: https://github.com/galaxyproject/galaxy/pull/11319
|
||||
.. _Pull Request 11320: https://github.com/galaxyproject/galaxy/pull/11320
|
||||
.. _Pull Request 11322: https://github.com/galaxyproject/galaxy/pull/11322
|
||||
.. _Pull Request 11326: https://github.com/galaxyproject/galaxy/pull/11326
|
||||
.. _Pull Request 11329: https://github.com/galaxyproject/galaxy/pull/11329
|
||||
.. _Pull Request 11331: https://github.com/galaxyproject/galaxy/pull/11331
|
||||
.. _Pull Request 11342: https://github.com/galaxyproject/galaxy/pull/11342
|
||||
.. _Pull Request 11346: https://github.com/galaxyproject/galaxy/pull/11346
|
||||
.. _Pull Request 11347: https://github.com/galaxyproject/galaxy/pull/11347
|
||||
.. _Pull Request 11351: https://github.com/galaxyproject/galaxy/pull/11351
|
||||
.. _Pull Request 11358: https://github.com/galaxyproject/galaxy/pull/11358
|
||||
.. _Pull Request 11359: https://github.com/galaxyproject/galaxy/pull/11359
|
||||
.. _Pull Request 11362: https://github.com/galaxyproject/galaxy/pull/11362
|
||||
.. _Pull Request 11365: https://github.com/galaxyproject/galaxy/pull/11365
|
||||
.. _Pull Request 11378: https://github.com/galaxyproject/galaxy/pull/11378
|
||||
.. _Pull Request 11380: https://github.com/galaxyproject/galaxy/pull/11380
|
||||
.. _Pull Request 11383: https://github.com/galaxyproject/galaxy/pull/11383
|
||||
.. _Pull Request 11384: https://github.com/galaxyproject/galaxy/pull/11384
|
||||
.. _Pull Request 11385: https://github.com/galaxyproject/galaxy/pull/11385
|
||||
.. _Pull Request 11386: https://github.com/galaxyproject/galaxy/pull/11386
|
||||
.. _Pull Request 11390: https://github.com/galaxyproject/galaxy/pull/11390
|
||||
.. _Pull Request 11393: https://github.com/galaxyproject/galaxy/pull/11393
|
||||
.. _Pull Request 11394: https://github.com/galaxyproject/galaxy/pull/11394
|
||||
.. _Pull Request 11400: https://github.com/galaxyproject/galaxy/pull/11400
|
||||
.. _Pull Request 11402: https://github.com/galaxyproject/galaxy/pull/11402
|
||||
.. _Pull Request 11403: https://github.com/galaxyproject/galaxy/pull/11403
|
||||
.. _Pull Request 11404: https://github.com/galaxyproject/galaxy/pull/11404
|
||||
.. _Pull Request 11405: https://github.com/galaxyproject/galaxy/pull/11405
|
||||
.. _Pull Request 11411: https://github.com/galaxyproject/galaxy/pull/11411
|
||||
.. _Pull Request 11412: https://github.com/galaxyproject/galaxy/pull/11412
|
||||
.. _Pull Request 11417: https://github.com/galaxyproject/galaxy/pull/11417
|
||||
.. _Pull Request 11418: https://github.com/galaxyproject/galaxy/pull/11418
|
||||
.. _Pull Request 11422: https://github.com/galaxyproject/galaxy/pull/11422
|
||||
.. _Pull Request 11424: https://github.com/galaxyproject/galaxy/pull/11424
|
||||
.. _Pull Request 11425: https://github.com/galaxyproject/galaxy/pull/11425
|
||||
.. _Pull Request 11429: https://github.com/galaxyproject/galaxy/pull/11429
|
||||
.. _Pull Request 11452: https://github.com/galaxyproject/galaxy/pull/11452
|
||||
.. _Pull Request 11454: https://github.com/galaxyproject/galaxy/pull/11454
|
||||
.. _Pull Request 11458: https://github.com/galaxyproject/galaxy/pull/11458
|
||||
.. _Pull Request 11467: https://github.com/galaxyproject/galaxy/pull/11467
|
||||
.. _Pull Request 11469: https://github.com/galaxyproject/galaxy/pull/11469
|
||||
.. _Pull Request 11477: https://github.com/galaxyproject/galaxy/pull/11477
|
||||
.. _Pull Request 11478: https://github.com/galaxyproject/galaxy/pull/11478
|
||||
.. _Pull Request 11482: https://github.com/galaxyproject/galaxy/pull/11482
|
||||
.. _Pull Request 11483: https://github.com/galaxyproject/galaxy/pull/11483
|
||||
.. _Pull Request 11485: https://github.com/galaxyproject/galaxy/pull/11485
|
||||
.. _Pull Request 11486: https://github.com/galaxyproject/galaxy/pull/11486
|
||||
.. _Pull Request 11489: https://github.com/galaxyproject/galaxy/pull/11489
|
||||
.. _Pull Request 11496: https://github.com/galaxyproject/galaxy/pull/11496
|
||||
.. _Pull Request 11497: https://github.com/galaxyproject/galaxy/pull/11497
|
||||
.. _Pull Request 11507: https://github.com/galaxyproject/galaxy/pull/11507
|
||||
.. _Pull Request 11508: https://github.com/galaxyproject/galaxy/pull/11508
|
||||
.. _Pull Request 11509: https://github.com/galaxyproject/galaxy/pull/11509
|
||||
.. _Pull Request 11526: https://github.com/galaxyproject/galaxy/pull/11526
|
||||
.. _Pull Request 11530: https://github.com/galaxyproject/galaxy/pull/11530
|
||||
.. _Pull Request 11539: https://github.com/galaxyproject/galaxy/pull/11539
|
||||
.. _Pull Request 11552: https://github.com/galaxyproject/galaxy/pull/11552
|
||||
.. _Pull Request 11557: https://github.com/galaxyproject/galaxy/pull/11557
|
||||
.. _Pull Request 11560: https://github.com/galaxyproject/galaxy/pull/11560
|
||||
.. _Pull Request 11561: https://github.com/galaxyproject/galaxy/pull/11561
|
||||
.. _Pull Request 11566: https://github.com/galaxyproject/galaxy/pull/11566
|
||||
.. _Pull Request 11568: https://github.com/galaxyproject/galaxy/pull/11568
|
||||
.. _Pull Request 11570: https://github.com/galaxyproject/galaxy/pull/11570
|
||||
.. _Pull Request 11575: https://github.com/galaxyproject/galaxy/pull/11575
|
||||
.. _Pull Request 11580: https://github.com/galaxyproject/galaxy/pull/11580
|
||||
.. _Pull Request 11588: https://github.com/galaxyproject/galaxy/pull/11588
|
||||
.. _Pull Request 11589: https://github.com/galaxyproject/galaxy/pull/11589
|
||||
.. _Pull Request 11590: https://github.com/galaxyproject/galaxy/pull/11590
|
||||
.. _Pull Request 11591: https://github.com/galaxyproject/galaxy/pull/11591
|
||||
.. _Pull Request 11592: https://github.com/galaxyproject/galaxy/pull/11592
|
||||
.. _Pull Request 11599: https://github.com/galaxyproject/galaxy/pull/11599
|
||||
.. _Pull Request 11600: https://github.com/galaxyproject/galaxy/pull/11600
|
||||
.. _Pull Request 11604: https://github.com/galaxyproject/galaxy/pull/11604
|
||||
.. _Pull Request 11607: https://github.com/galaxyproject/galaxy/pull/11607
|
||||
.. _Pull Request 11614: https://github.com/galaxyproject/galaxy/pull/11614
|
||||
.. _Pull Request 11616: https://github.com/galaxyproject/galaxy/pull/11616
|
||||
.. _Pull Request 11619: https://github.com/galaxyproject/galaxy/pull/11619
|
||||
.. _Pull Request 11627: https://github.com/galaxyproject/galaxy/pull/11627
|
||||
.. _Pull Request 11629: https://github.com/galaxyproject/galaxy/pull/11629
|
||||
.. _Pull Request 11631: https://github.com/galaxyproject/galaxy/pull/11631
|
||||
.. _Pull Request 11633: https://github.com/galaxyproject/galaxy/pull/11633
|
||||
.. _Pull Request 11634: https://github.com/galaxyproject/galaxy/pull/11634
|
||||
.. _Pull Request 11637: https://github.com/galaxyproject/galaxy/pull/11637
|
||||
.. _Pull Request 11638: https://github.com/galaxyproject/galaxy/pull/11638
|
||||
.. _Pull Request 11639: https://github.com/galaxyproject/galaxy/pull/11639
|
||||
.. _Pull Request 11640: https://github.com/galaxyproject/galaxy/pull/11640
|
||||
.. _Pull Request 11641: https://github.com/galaxyproject/galaxy/pull/11641
|
||||
.. _Pull Request 11643: https://github.com/galaxyproject/galaxy/pull/11643
|
||||
.. _Pull Request 11646: https://github.com/galaxyproject/galaxy/pull/11646
|
||||
.. _Pull Request 11647: https://github.com/galaxyproject/galaxy/pull/11647
|
||||
.. _Pull Request 11648: https://github.com/galaxyproject/galaxy/pull/11648
|
||||
.. _Pull Request 11649: https://github.com/galaxyproject/galaxy/pull/11649
|
||||
.. _Pull Request 11650: https://github.com/galaxyproject/galaxy/pull/11650
|
||||
.. _Pull Request 11654: https://github.com/galaxyproject/galaxy/pull/11654
|
||||
.. _Pull Request 11655: https://github.com/galaxyproject/galaxy/pull/11655
|
||||
.. _Pull Request 11660: https://github.com/galaxyproject/galaxy/pull/11660
|
||||
.. _Pull Request 11661: https://github.com/galaxyproject/galaxy/pull/11661
|
||||
.. _Pull Request 11662: https://github.com/galaxyproject/galaxy/pull/11662
|
||||
.. _Pull Request 11663: https://github.com/galaxyproject/galaxy/pull/11663
|
||||
.. _Pull Request 11664: https://github.com/galaxyproject/galaxy/pull/11664
|
||||
.. _Pull Request 11665: https://github.com/galaxyproject/galaxy/pull/11665
|
||||
.. _Pull Request 11669: https://github.com/galaxyproject/galaxy/pull/11669
|
||||
.. _Pull Request 11670: https://github.com/galaxyproject/galaxy/pull/11670
|
||||
.. _Pull Request 11671: https://github.com/galaxyproject/galaxy/pull/11671
|
||||
.. _Pull Request 11673: https://github.com/galaxyproject/galaxy/pull/11673
|
||||
.. _Pull Request 11674: https://github.com/galaxyproject/galaxy/pull/11674
|
||||
.. _Pull Request 11676: https://github.com/galaxyproject/galaxy/pull/11676
|
||||
.. _Pull Request 11678: https://github.com/galaxyproject/galaxy/pull/11678
|
||||
.. _Pull Request 11680: https://github.com/galaxyproject/galaxy/pull/11680
|
||||
.. _Pull Request 11682: https://github.com/galaxyproject/galaxy/pull/11682
|
||||
.. _Pull Request 11683: https://github.com/galaxyproject/galaxy/pull/11683
|
||||
.. _Pull Request 11684: https://github.com/galaxyproject/galaxy/pull/11684
|
||||
.. _Pull Request 11686: https://github.com/galaxyproject/galaxy/pull/11686
|
||||
.. _Pull Request 11687: https://github.com/galaxyproject/galaxy/pull/11687
|
||||
.. _Pull Request 11692: https://github.com/galaxyproject/galaxy/pull/11692
|
||||
.. _Pull Request 11693: https://github.com/galaxyproject/galaxy/pull/11693
|
||||
.. _Pull Request 11694: https://github.com/galaxyproject/galaxy/pull/11694
|
||||
.. _Pull Request 11696: https://github.com/galaxyproject/galaxy/pull/11696
|
||||
.. _Pull Request 11697: https://github.com/galaxyproject/galaxy/pull/11697
|
||||
.. _Pull Request 11700: https://github.com/galaxyproject/galaxy/pull/11700
|
||||
.. _Pull Request 11702: https://github.com/galaxyproject/galaxy/pull/11702
|
||||
.. _Pull Request 11703: https://github.com/galaxyproject/galaxy/pull/11703
|
||||
.. _Pull Request 11708: https://github.com/galaxyproject/galaxy/pull/11708
|
||||
.. _Pull Request 11711: https://github.com/galaxyproject/galaxy/pull/11711
|
||||
.. _Pull Request 11712: https://github.com/galaxyproject/galaxy/pull/11712
|
||||
.. _Pull Request 11716: https://github.com/galaxyproject/galaxy/pull/11716
|
||||
.. _Pull Request 11718: https://github.com/galaxyproject/galaxy/pull/11718
|
||||
.. _Pull Request 11720: https://github.com/galaxyproject/galaxy/pull/11720
|
||||
.. _Pull Request 11724: https://github.com/galaxyproject/galaxy/pull/11724
|
||||
.. _Pull Request 11727: https://github.com/galaxyproject/galaxy/pull/11727
|
||||
.. _Pull Request 11728: https://github.com/galaxyproject/galaxy/pull/11728
|
||||
.. _Pull Request 11731: https://github.com/galaxyproject/galaxy/pull/11731
|
||||
.. _Pull Request 11732: https://github.com/galaxyproject/galaxy/pull/11732
|
||||
.. _Pull Request 11736: https://github.com/galaxyproject/galaxy/pull/11736
|
||||
.. _Pull Request 11740: https://github.com/galaxyproject/galaxy/pull/11740
|
||||
.. _Pull Request 11741: https://github.com/galaxyproject/galaxy/pull/11741
|
||||
.. _Pull Request 11747: https://github.com/galaxyproject/galaxy/pull/11747
|
||||
.. _Pull Request 11749: https://github.com/galaxyproject/galaxy/pull/11749
|
||||
.. _Pull Request 11750: https://github.com/galaxyproject/galaxy/pull/11750
|
||||
.. _Pull Request 11751: https://github.com/galaxyproject/galaxy/pull/11751
|
||||
.. _Pull Request 11753: https://github.com/galaxyproject/galaxy/pull/11753
|
||||
.. _Pull Request 11757: https://github.com/galaxyproject/galaxy/pull/11757
|
||||
.. _Pull Request 11758: https://github.com/galaxyproject/galaxy/pull/11758
|
||||
.. _Pull Request 11761: https://github.com/galaxyproject/galaxy/pull/11761
|
||||
.. _Pull Request 11762: https://github.com/galaxyproject/galaxy/pull/11762
|
||||
.. _Pull Request 11763: https://github.com/galaxyproject/galaxy/pull/11763
|
||||
.. _Pull Request 11764: https://github.com/galaxyproject/galaxy/pull/11764
|
||||
.. _Pull Request 11765: https://github.com/galaxyproject/galaxy/pull/11765
|
||||
.. _Pull Request 11769: https://github.com/galaxyproject/galaxy/pull/11769
|
||||
.. _Pull Request 11772: https://github.com/galaxyproject/galaxy/pull/11772
|
||||
.. _Pull Request 11773: https://github.com/galaxyproject/galaxy/pull/11773
|
||||
.. _Pull Request 11776: https://github.com/galaxyproject/galaxy/pull/11776
|
||||
.. _Pull Request 11777: https://github.com/galaxyproject/galaxy/pull/11777
|
||||
.. _Pull Request 11778: https://github.com/galaxyproject/galaxy/pull/11778
|
||||
.. _Pull Request 11779: https://github.com/galaxyproject/galaxy/pull/11779
|
||||
.. _Pull Request 11782: https://github.com/galaxyproject/galaxy/pull/11782
|
||||
.. _Pull Request 11783: https://github.com/galaxyproject/galaxy/pull/11783
|
||||
.. _Pull Request 11788: https://github.com/galaxyproject/galaxy/pull/11788
|
||||
.. _Pull Request 11789: https://github.com/galaxyproject/galaxy/pull/11789
|
||||
.. _Pull Request 11790: https://github.com/galaxyproject/galaxy/pull/11790
|
||||
.. _Pull Request 11791: https://github.com/galaxyproject/galaxy/pull/11791
|
||||
.. _Pull Request 11792: https://github.com/galaxyproject/galaxy/pull/11792
|
||||
.. _Pull Request 11793: https://github.com/galaxyproject/galaxy/pull/11793
|
||||
.. _Pull Request 11794: https://github.com/galaxyproject/galaxy/pull/11794
|
||||
.. _Pull Request 11795: https://github.com/galaxyproject/galaxy/pull/11795
|
||||
.. _Pull Request 11798: https://github.com/galaxyproject/galaxy/pull/11798
|
||||
.. _Pull Request 11800: https://github.com/galaxyproject/galaxy/pull/11800
|
||||
.. _Pull Request 11801: https://github.com/galaxyproject/galaxy/pull/11801
|
||||
.. _Pull Request 11802: https://github.com/galaxyproject/galaxy/pull/11802
|
||||
.. _Pull Request 11808: https://github.com/galaxyproject/galaxy/pull/11808
|
||||
.. _Pull Request 11810: https://github.com/galaxyproject/galaxy/pull/11810
|
||||
.. _Pull Request 11811: https://github.com/galaxyproject/galaxy/pull/11811
|
||||
.. _Pull Request 11812: https://github.com/galaxyproject/galaxy/pull/11812
|
||||
.. _Pull Request 11814: https://github.com/galaxyproject/galaxy/pull/11814
|
||||
.. _Pull Request 11815: https://github.com/galaxyproject/galaxy/pull/11815
|
||||
.. _Pull Request 11816: https://github.com/galaxyproject/galaxy/pull/11816
|
||||
.. _Pull Request 11818: https://github.com/galaxyproject/galaxy/pull/11818
|
||||
.. _Pull Request 11825: https://github.com/galaxyproject/galaxy/pull/11825
|
||||
.. _Pull Request 11826: https://github.com/galaxyproject/galaxy/pull/11826
|
||||
.. _Pull Request 11830: https://github.com/galaxyproject/galaxy/pull/11830
|
||||
.. _Pull Request 11831: https://github.com/galaxyproject/galaxy/pull/11831
|
||||
.. _Pull Request 11832: https://github.com/galaxyproject/galaxy/pull/11832
|
||||
.. _Pull Request 11835: https://github.com/galaxyproject/galaxy/pull/11835
|
||||
.. _Pull Request 11838: https://github.com/galaxyproject/galaxy/pull/11838
|
||||
.. _Pull Request 11839: https://github.com/galaxyproject/galaxy/pull/11839
|
||||
.. _Pull Request 11840: https://github.com/galaxyproject/galaxy/pull/11840
|
||||
.. _Pull Request 11843: https://github.com/galaxyproject/galaxy/pull/11843
|
||||
.. _Pull Request 11844: https://github.com/galaxyproject/galaxy/pull/11844
|
||||
.. _Pull Request 11845: https://github.com/galaxyproject/galaxy/pull/11845
|
||||
.. _Pull Request 11846: https://github.com/galaxyproject/galaxy/pull/11846
|
||||
.. _Pull Request 11847: https://github.com/galaxyproject/galaxy/pull/11847
|
||||
.. _Pull Request 11849: https://github.com/galaxyproject/galaxy/pull/11849
|
||||
.. _Pull Request 11850: https://github.com/galaxyproject/galaxy/pull/11850
|
||||
.. _Pull Request 11852: https://github.com/galaxyproject/galaxy/pull/11852
|
||||
.. _Pull Request 11856: https://github.com/galaxyproject/galaxy/pull/11856
|
||||
.. _Pull Request 11859: https://github.com/galaxyproject/galaxy/pull/11859
|
||||
.. _Pull Request 11861: https://github.com/galaxyproject/galaxy/pull/11861
|
||||
.. _Pull Request 11863: https://github.com/galaxyproject/galaxy/pull/11863
|
||||
.. _Pull Request 11868: https://github.com/galaxyproject/galaxy/pull/11868
|
||||
.. _Pull Request 11871: https://github.com/galaxyproject/galaxy/pull/11871
|
||||
.. _Pull Request 11872: https://github.com/galaxyproject/galaxy/pull/11872
|
||||
.. _Pull Request 11873: https://github.com/galaxyproject/galaxy/pull/11873
|
||||
.. _Pull Request 11874: https://github.com/galaxyproject/galaxy/pull/11874
|
||||
.. _Pull Request 11877: https://github.com/galaxyproject/galaxy/pull/11877
|
||||
.. _Pull Request 11878: https://github.com/galaxyproject/galaxy/pull/11878
|
||||
.. _Pull Request 11879: https://github.com/galaxyproject/galaxy/pull/11879
|
||||
.. _Pull Request 11880: https://github.com/galaxyproject/galaxy/pull/11880
|
||||
.. _Pull Request 11881: https://github.com/galaxyproject/galaxy/pull/11881
|
||||
.. _Pull Request 11882: https://github.com/galaxyproject/galaxy/pull/11882
|
||||
.. _Pull Request 11883: https://github.com/galaxyproject/galaxy/pull/11883
|
||||
.. _Pull Request 11884: https://github.com/galaxyproject/galaxy/pull/11884
|
||||
.. _Pull Request 11886: https://github.com/galaxyproject/galaxy/pull/11886
|
||||
.. _Pull Request 11891: https://github.com/galaxyproject/galaxy/pull/11891
|
||||
.. _Pull Request 11895: https://github.com/galaxyproject/galaxy/pull/11895
|
||||
.. _Pull Request 11897: https://github.com/galaxyproject/galaxy/pull/11897
|
||||
.. _Pull Request 11899: https://github.com/galaxyproject/galaxy/pull/11899
|
||||
.. _Pull Request 11900: https://github.com/galaxyproject/galaxy/pull/11900
|
||||
.. _Pull Request 11901: https://github.com/galaxyproject/galaxy/pull/11901
|
||||
.. _Pull Request 11902: https://github.com/galaxyproject/galaxy/pull/11902
|
||||
.. _Pull Request 11904: https://github.com/galaxyproject/galaxy/pull/11904
|
||||
.. _Pull Request 11905: https://github.com/galaxyproject/galaxy/pull/11905
|
||||
.. _Pull Request 11906: https://github.com/galaxyproject/galaxy/pull/11906
|
||||
.. _Pull Request 11907: https://github.com/galaxyproject/galaxy/pull/11907
|
||||
.. _Pull Request 11908: https://github.com/galaxyproject/galaxy/pull/11908
|
||||
.. _Pull Request 11909: https://github.com/galaxyproject/galaxy/pull/11909
|
||||
.. _Pull Request 11910: https://github.com/galaxyproject/galaxy/pull/11910
|
||||
.. _Pull Request 11911: https://github.com/galaxyproject/galaxy/pull/11911
|
||||
.. _Pull Request 11912: https://github.com/galaxyproject/galaxy/pull/11912
|
||||
.. _Pull Request 11913: https://github.com/galaxyproject/galaxy/pull/11913
|
||||
.. _Pull Request 11918: https://github.com/galaxyproject/galaxy/pull/11918
|
||||
.. _Pull Request 11922: https://github.com/galaxyproject/galaxy/pull/11922
|
||||
.. _Pull Request 11923: https://github.com/galaxyproject/galaxy/pull/11923
|
||||
.. _Pull Request 11925: https://github.com/galaxyproject/galaxy/pull/11925
|
||||
.. _Pull Request 11928: https://github.com/galaxyproject/galaxy/pull/11928
|
||||
.. _Pull Request 11929: https://github.com/galaxyproject/galaxy/pull/11929
|
||||
Reference in New Issue
Block a user