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Stronger assertion about link_data_only option in upload.py.

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This commit is contained in:
John Chilton
2018-03-08 10:32:19 -05:00
parent 306dded248
commit a45cbfeb8d
1 changed files with 4 additions and 1 deletions
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tools/data_source/upload.py
+4 -1
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@@ -83,7 +83,10 @@ def add_file(dataset, registry, json_file, output_path):
line_count = None
converted_path = None
stdout = None
link_data_only = dataset.get('link_data_only', 'copy_files') != 'copy_files'
link_data_only_str = dataset.get('link_data_only', 'copy_files')
if link_data_only_str not in ['link_data_only', 'copy_files']:
raise UploadProblemException("Invalid setting for option link_data_only - upload request misconfigured.")
link_data_only = link_data_only_str == 'link_data_only'
# run_as_real_user is estimated from galaxy config (external chmod indicated of inputs executed)
# If this is True we always purge supplied upload inputs so they are cleaned up and we reuse their