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Update dependencies

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mvdbeek
2024-01-08 11:33:41 +01:00
parent 7c8eecc63a
commit 9dfdd7dcba
4 changed files with 7 additions and 8 deletions
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lib/galaxy/dependencies/pinned-requirements.txt
+4 -4
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@@ -64,7 +64,7 @@ ecdsa==0.18.0 ; python_version >= "3.8" and python_version < "3.12"
edam-ontology==1.25.2 ; python_version >= "3.8" and python_version < "3.12"
email-validator==2.1.0.post1 ; python_version >= "3.8" and python_version < "3.12"
exceptiongroup==1.2.0 ; python_version >= "3.8" and python_version < "3.11"
fastapi==0.98.0 ; python_version >= "3.8" and python_version < "3.12"
fastapi==0.108.0 ; python_version >= "3.8" and python_version < "3.12"
filelock==3.13.1 ; python_version >= "3.8" and python_version < "3.12"
frozenlist==1.4.1 ; python_version >= "3.8" and python_version < "3.12"
fs==2.4.16 ; python_version >= "3.8" and python_version < "3.12"
@@ -132,8 +132,8 @@ pyasn1==0.5.1 ; python_version >= "3.8" and python_version < "3.12"
pycparser==2.21 ; python_version >= "3.8" and python_version < "3.12"
pycryptodome==3.19.1 ; python_version >= "3.8" and python_version < "3.12"
pydantic-tes==0.1.5 ; python_version >= "3.8" and python_version < "3.12"
pydantic==1.10.13 ; python_version >= "3.8" and python_version < "3.12"
pydantic[email]==1.10.13 ; python_version >= "3.8" and python_version < "3.12"
pydantic==2.5.3 ; python_version >= "3.8" and python_version < "3.12"
pydantic[email]==2.5.3 ; python_version >= "3.8" and python_version < "3.12"
pydot==1.4.2 ; python_version >= "3.8" and python_version < "3.12"
pyeventsystem==0.1.0 ; python_version >= "3.8" and python_version < "3.12"
pyfaidx==0.7.2.2 ; python_version >= "3.8" and python_version < "3.12"
@@ -185,7 +185,7 @@ sqlitedict==2.1.0 ; python_version >= "3.8" and python_version < "3.12"
sqlparse==0.4.4 ; python_version >= "3.8" and python_version < "3.12"
starlette-context==0.3.6 ; python_version >= "3.8" and python_version < "3.12"
starlette-graphene3==0.6.0 ; python_version >= "3.8" and python_version < "3.12"
starlette==0.27.0 ; python_version >= "3.8" and python_version < "3.12"
starlette==0.32.0.post1 ; python_version >= "3.8" and python_version < "3.12"
supervisor==4.2.5 ; python_version >= "3.8" and python_version < "3.12"
svgwrite==1.4.3 ; python_version >= "3.8" and python_version < "3.12"
tenacity==8.2.3 ; python_version >= "3.8" and python_version < "3.12"
lib/galaxy/dependencies/pinned-typecheck-requirements.txt
+1 -1
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@@ -3,7 +3,7 @@ cryptography==41.0.7 ; python_version >= "3.8" and python_version < "3.12"
mypy-extensions==1.0.0 ; python_version >= "3.8" and python_version < "3.12"
mypy==1.8.0 ; python_version >= "3.8" and python_version < "3.12"
pycparser==2.21 ; python_version >= "3.8" and python_version < "3.12"
pydantic==1.10.13 ; python_version >= "3.8" and python_version < "3.12"
pydantic==2.5.3 ; python_version >= "3.8" and python_version < "3.12"
tomli==2.0.1 ; python_version >= "3.8" and python_version < "3.11"
types-bleach==6.1.0.1 ; python_version >= "3.8" and python_version < "3.12"
types-boto==2.49.18.9 ; python_version >= "3.8" and python_version < "3.12"
packages/web_apps/setup.cfg
-1
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@@ -43,7 +43,6 @@ install_requires =
Babel
Cheetah3
fastapi>=0.101.0
fastapi-utils @ https://github.com/mvdbeek/fastapi-utils/archive/refs/heads/pydantic-2.zip
gunicorn
gxformat2
importlib_resources
pyproject.toml
+2 -2
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@@ -57,7 +57,7 @@ dnspython = "*"
docutils = "!=0.17, !=0.17.1"
dparse = "*"
edam-ontology = "*"
fastapi = ">=0.71.0, !=0.89.0, <0.99" # https://github.com/tiangolo/fastapi/issues/4041 https://github.com/tiangolo/fastapi/issues/5861
fastapi = ">=0.108"
fs = "*"
future = "*"
galaxy_sequence_utils = "*"
@@ -87,7 +87,7 @@ pebble = "*"
psutil = "*"
pulsar-galaxy-lib = ">=0.15.0.dev0"
pycryptodome = "*"
pydantic = {version = "<2", extras = ["email"]}
pydantic = {version = ">=2", extras = ["email"]}
PyJWT = "*"
pykwalify = "*"
pylibmagic = "*"