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Removed testing using 'containsh5keys' attribute

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msauria
2019-05-17 10:02:43 -04:00
parent 1ad49039a4
commit 9da400a5dd
2 changed files with 2 additions and 15 deletions
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lib/galaxy/tools/xsd/galaxy.xsd
+1 -13
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@@ -1652,8 +1652,6 @@ module.
</xs:element>
<xs:element name="has_h5_keys" type="AssertHasH5Keys">
</xs:element>
<xs:element name="contains_h5_keys" type="AssertContainsH5Keys">
</xs:element>
<xs:element name="has_h5_attribute" type="AssertHasH5Attribute">
</xs:element>
<xs:element name="has_archive_member" type="AssertHasArchiveMember">
@@ -1662,17 +1660,7 @@ module.
</xs:group>
<xs:complexType name="AssertHasH5Keys">
<xs:annotation>
<xs:documentation xml:lang="en"><![CDATA[Asserts HDF5 output has a set of attributes (``keys``), specified as a comma-separated list (e.g. ``<has_h5_keys keys="bins,chroms,indexes,pixels" />``).]]></xs:documentation>
</xs:annotation>
<xs:attribute name="keys" type="xs:string">
<xs:annotation>
<xs:documentation xml:lang="en">Comma-separated list of HDF5 attributes to check for.</xs:documentation>
</xs:annotation>
</xs:attribute>
</xs:complexType>
<xs:complexType name="AssertContainsH5Keys">
<xs:annotation>
<xs:documentation xml:lang="en"><![CDATA[Asserts HDF5 output includes a set of attributes (``keys``) including nested attributes, specified as a comma-separated list (e.g. ``<contains_h5_keys keys="bins,resolution/chroms,indexes,pixels" />``).]]></xs:documentation>
<xs:documentation xml:lang="en"><![CDATA[Asserts HDF5 output has a set of attributes (``keys``), specified as a comma-separated list (e.g. ``<has_h5_keys keys="bins,chroms,indexes,pixels,chroms/lengths" />``).]]></xs:documentation>
</xs:annotation>
<xs:attribute name="keys" type="xs:string">
<xs:annotation>
test/functional/tools/validation_hdf5.xml
+1 -2
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@@ -13,8 +13,7 @@
<param name="input" value="matrix.cool" />
<output name="output">
<assert_contents>
<has_h5_keys keys="bins, chroms,indexes,pixels" />
<contains_h5_keys keys="bins,chroms/length,chroms,name" />
<has_h5_keys keys="bins, chroms,indexes,pixels,chroms/length" />
<has_h5_attribute key="nbins" value="33754" />
<has_h5_attribute key="nchroms" value="15" />
</assert_contents>