mirror of
https://github.com/galaxyproject/galaxy.git
synced 2026-08-30 16:58:03 +08:00
Add galaxy-web-stack and galaxy-web-framework packages.
This commit is contained in:
John Chilton
@@ -1,5 +1,10 @@
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"""For backward compatibility only, pulls app_factor from galaxy.webapps.main"""
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from galaxy.webapps.galaxy.buildapp import app_factory
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try:
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from galaxy.webapps.galaxy.buildapp import app_factory
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except ImportError:
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# when installed as a library, galaxy-web-apps may not be available - this
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# is fine - we shouldn't be using this entry point anyway.
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app_factory = None
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__all__ = ('app_factory', )
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@@ -1,3 +1,4 @@
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galaxy-auth
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galaxy-job-execution
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galaxy-web-framework
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galaxy-web-stack
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+3
-1
@@ -24,11 +24,13 @@ PACKAGE_DIRS=(
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job_execution
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auth
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authnz
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web_stack
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web_framework
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app
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)
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# containers has no tests, tool_util not yet working 100%,
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# data has many problems quota, tool shed install database, etc..
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RUN_TESTS=(1 1 1 0 1 0 1 0 1 0)
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RUN_TESTS=(1 1 1 0 1 0 1 0 1 0 0 0)
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for ((i=0; i<${#PACKAGE_DIRS[@]}; i++)); do
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package_dir=${PACKAGE_DIRS[$i]}
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@@ -0,0 +1,12 @@
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.. :changelog:
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History
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-------
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.. to_doc
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---------------------
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19.9.0.dev0
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---------------------
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* Initial import from dev branch of Galaxy during 19.09 development cycle.
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Symlink
+1
@@ -0,0 +1 @@
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../../LICENSE.txt
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@@ -0,0 +1 @@
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include *.rst LICENSE
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Symlink
+1
@@ -0,0 +1 @@
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../package.Makefile
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@@ -0,0 +1,14 @@
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.. image:: https://badge.fury.io/py/galaxy-web-framework.svg
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:target: https://pypi.org/project/galaxy-web-framework/
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Overview
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--------
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The Galaxy_ web framework.
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* Free software: Academic Free License version 3.0
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* Code: https://github.com/galaxyproject/galaxy
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.. _Galaxy: http://galaxyproject.org/
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@@ -0,0 +1 @@
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../package-dev-requirements.txt
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@@ -0,0 +1 @@
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__path__ = __import__('pkgutil').extend_path(__path__, __name__)
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@@ -0,0 +1,13 @@
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# -*- coding: utf-8 -*-
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__version__ = '19.9.0.dev0'
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PROJECT_NAME = "galaxy-web-framework"
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PROJECT_OWNER = PROJECT_USERAME = "galaxyproject"
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PROJECT_URL = "https://github.com/galaxyproject/galaxy"
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PROJECT_AUTHOR = 'Galaxy Project and Community'
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PROJECT_DESCRIPTION = 'Galaxy Web Framework'
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PROJECT_EMAIL = 'galaxy-committers@lists.galaxyproject.org'
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RAW_CONTENT_URL = "https://raw.github.com/%s/%s/master/" % (
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PROJECT_USERAME, PROJECT_NAME
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)
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+1
@@ -0,0 +1 @@
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../../../lib/galaxy/web
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@@ -0,0 +1 @@
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galaxy-data
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Symlink
+1
@@ -0,0 +1 @@
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../build_scripts
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Symlink
+1
@@ -0,0 +1 @@
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../../setup.cfg
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@@ -0,0 +1,104 @@
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#!/usr/bin/env python
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# -*- coding: utf-8 -*-
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import ast
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import os
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import re
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try:
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from setuptools import setup
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except ImportError:
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from distutils.core import setup
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SOURCE_DIR = "galaxy"
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_version_re = re.compile(r'__version__\s+=\s+(.*)')
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project_short_name = os.path.basename(os.path.dirname(os.path.realpath(__file__)))
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with open('%s/project_galaxy_%s.py' % (SOURCE_DIR, project_short_name), 'rb') as f:
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init_contents = f.read().decode('utf-8')
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def get_var(var_name):
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pattern = re.compile(r'%s\s+=\s+(.*)' % var_name)
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match = pattern.search(init_contents).group(1)
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return str(ast.literal_eval(match))
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version = get_var("__version__")
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PROJECT_NAME = get_var("PROJECT_NAME")
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PROJECT_URL = get_var("PROJECT_URL")
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PROJECT_AUTHOR = get_var("PROJECT_AUTHOR")
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PROJECT_EMAIL = get_var("PROJECT_EMAIL")
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PROJECT_DESCRIPTION = get_var("PROJECT_DESCRIPTION")
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TEST_DIR = 'tests'
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PACKAGES = [
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'galaxy',
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'galaxy.web',
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'galaxy.web.framework',
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'galaxy.web.framework.helpers',
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'galaxy.web.framework.middleware',
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'galaxy.web.proxy',
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]
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ENTRY_POINTS = '''
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[console_scripts]
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'''
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PACKAGE_DATA = {
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# Be sure to update MANIFEST.in for source dist.
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'galaxy': [
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],
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}
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PACKAGE_DIR = {
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SOURCE_DIR: SOURCE_DIR,
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}
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readme = open('README.rst').read()
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history = open('HISTORY.rst').read().replace('.. :changelog:', '')
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if os.path.exists("requirements.txt"):
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requirements = open("requirements.txt").read().split("\n")
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else:
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# In tox, it will cover them anyway.
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requirements = []
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test_requirements = [
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# TODO: put package test requirements here
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]
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setup(
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name=PROJECT_NAME,
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version=version,
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description=PROJECT_DESCRIPTION,
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long_description=readme + '\n\n' + history,
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long_description_content_type='text/x-rst',
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author=PROJECT_AUTHOR,
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author_email=PROJECT_EMAIL,
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url=PROJECT_URL,
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packages=PACKAGES,
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entry_points=ENTRY_POINTS,
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package_data=PACKAGE_DATA,
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package_dir=PACKAGE_DIR,
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include_package_data=True,
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install_requires=requirements,
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license="AFL",
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zip_safe=False,
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keywords='galaxy',
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classifiers=[
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'Development Status :: 5 - Production/Stable',
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'Intended Audience :: Developers',
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'Environment :: Console',
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'License :: OSI Approved :: Academic Free License (AFL)',
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'Operating System :: POSIX',
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'Topic :: Software Development',
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'Topic :: Software Development :: Code Generators',
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'Topic :: Software Development :: Testing',
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'Natural Language :: English',
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"Programming Language :: Python :: 2",
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'Programming Language :: Python :: 2.7',
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'Programming Language :: Python :: 3.5',
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'Programming Language :: Python :: 3.6',
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'Programming Language :: Python :: 3.7',
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],
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test_suite=TEST_DIR,
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tests_require=test_requirements
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)
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@@ -0,0 +1,12 @@
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.. :changelog:
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History
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-------
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.. to_doc
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---------------------
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19.9.0.dev0
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---------------------
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* Initial import from dev branch of Galaxy during 19.09 development cycle.
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Symlink
+1
@@ -0,0 +1 @@
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../../LICENSE.txt
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@@ -0,0 +1 @@
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include *.rst LICENSE
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Symlink
+1
@@ -0,0 +1 @@
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../package.Makefile
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@@ -0,0 +1,14 @@
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.. image:: https://badge.fury.io/py/galaxy-web-stack.svg
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:target: https://pypi.python.org/pypi/galaxy-web-stack/
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Overview
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--------
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The Galaxy_ web strack abstraction.
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* Free software: Academic Free License version 3.0
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* Code: https://github.com/galaxyproject/galaxy
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.. _Galaxy: http://galaxyproject.org/
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+1
@@ -0,0 +1 @@
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../package-dev-requirements.txt
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@@ -0,0 +1 @@
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__path__ = __import__('pkgutil').extend_path(__path__, __name__)
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@@ -0,0 +1,13 @@
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# -*- coding: utf-8 -*-
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__version__ = '19.9.0.dev0'
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PROJECT_NAME = "galaxy-web-stack"
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PROJECT_OWNER = PROJECT_USERAME = "galaxyproject"
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PROJECT_URL = "https://github.com/galaxyproject/galaxy"
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PROJECT_AUTHOR = 'Galaxy Project and Community'
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PROJECT_DESCRIPTION = 'Galaxy Web Strack Abstraction'
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PROJECT_EMAIL = 'galaxy-committers@lists.galaxyproject.org'
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RAW_CONTENT_URL = "https://raw.github.com/%s/%s/master/" % (
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PROJECT_USERAME, PROJECT_NAME
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)
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+1
@@ -0,0 +1 @@
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../../../lib/galaxy/web_stack
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@@ -0,0 +1,2 @@
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sqlalchemy
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galaxy-util
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Symlink
+1
@@ -0,0 +1 @@
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../build_scripts
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Symlink
+1
@@ -0,0 +1 @@
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../../setup.cfg
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@@ -0,0 +1,100 @@
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#!/usr/bin/env python
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# -*- coding: utf-8 -*-
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import ast
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import os
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import re
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try:
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from setuptools import setup
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except ImportError:
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from distutils.core import setup
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SOURCE_DIR = "galaxy"
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_version_re = re.compile(r'__version__\s+=\s+(.*)')
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project_short_name = os.path.basename(os.path.dirname(os.path.realpath(__file__)))
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with open('%s/project_galaxy_%s.py' % (SOURCE_DIR, project_short_name), 'rb') as f:
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init_contents = f.read().decode('utf-8')
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def get_var(var_name):
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pattern = re.compile(r'%s\s+=\s+(.*)' % var_name)
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match = pattern.search(init_contents).group(1)
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return str(ast.literal_eval(match))
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version = get_var("__version__")
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PROJECT_NAME = get_var("PROJECT_NAME")
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PROJECT_URL = get_var("PROJECT_URL")
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PROJECT_AUTHOR = get_var("PROJECT_AUTHOR")
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PROJECT_EMAIL = get_var("PROJECT_EMAIL")
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PROJECT_DESCRIPTION = get_var("PROJECT_DESCRIPTION")
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TEST_DIR = 'tests'
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PACKAGES = [
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'galaxy',
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'galaxy.web_stack',
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]
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ENTRY_POINTS = '''
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[console_scripts]
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'''
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PACKAGE_DATA = {
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# Be sure to update MANIFEST.in for source dist.
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'galaxy': [
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],
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}
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PACKAGE_DIR = {
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SOURCE_DIR: SOURCE_DIR,
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}
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readme = open('README.rst').read()
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history = open('HISTORY.rst').read().replace('.. :changelog:', '')
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if os.path.exists("requirements.txt"):
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requirements = open("requirements.txt").read().split("\n")
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else:
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# In tox, it will cover them anyway.
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requirements = []
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test_requirements = [
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# TODO: put package test requirements here
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]
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setup(
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name=PROJECT_NAME,
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version=version,
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description=PROJECT_DESCRIPTION,
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long_description=readme + '\n\n' + history,
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long_description_content_type='text/x-rst',
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author=PROJECT_AUTHOR,
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author_email=PROJECT_EMAIL,
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url=PROJECT_URL,
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packages=PACKAGES,
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entry_points=ENTRY_POINTS,
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package_data=PACKAGE_DATA,
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package_dir=PACKAGE_DIR,
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include_package_data=True,
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install_requires=requirements,
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license="AFL",
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zip_safe=False,
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keywords='galaxy',
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classifiers=[
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'Development Status :: 5 - Production/Stable',
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'Intended Audience :: Developers',
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'Environment :: Console',
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'License :: OSI Approved :: Academic Free License (AFL)',
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'Operating System :: POSIX',
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'Topic :: Software Development',
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'Topic :: Software Development :: Code Generators',
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'Topic :: Software Development :: Testing',
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'Natural Language :: English',
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"Programming Language :: Python :: 2",
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'Programming Language :: Python :: 2.7',
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'Programming Language :: Python :: 3.5',
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'Programming Language :: Python :: 3.6',
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'Programming Language :: Python :: 3.7',
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],
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test_suite=TEST_DIR,
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tests_require=test_requirements
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)
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