mirror of
https://github.com/galaxyproject/galaxy.git
synced 2026-09-24 16:30:27 +08:00
Move tools/verify/ into tool_util/verify/
Ref: https://github.com/galaxyproject/galaxy/issues/8073
This commit is contained in:
committed by
Nicola Soranzo
parent
e9b6c106d2
commit
9713184b03
@@ -5,7 +5,10 @@ import argparse
|
||||
import json
|
||||
import sys
|
||||
|
||||
from galaxy.tools.verify.interactor import GalaxyInteractorApi, verify_tool
|
||||
from .interactor import (
|
||||
GalaxyInteractorApi,
|
||||
verify_tool,
|
||||
)
|
||||
|
||||
DESCRIPTION = """Script to quickly run a tool test against a running Galaxy instance."""
|
||||
ALL_TESTS = "*all_tests*"
|
||||
@@ -4,9 +4,9 @@ import os.path
|
||||
|
||||
from six import string_types
|
||||
|
||||
from galaxy.tool_util.verify.interactor import ToolTestDescription
|
||||
import galaxy.tools.parameters.basic
|
||||
import galaxy.tools.parameters.grouping
|
||||
from galaxy.tools.verify.interactor import ToolTestDescription
|
||||
from galaxy.util import (
|
||||
string_as_bool,
|
||||
unicodify,
|
||||
|
||||
@@ -12,7 +12,7 @@ from base.populators import (
|
||||
uses_test_history,
|
||||
)
|
||||
|
||||
from galaxy.tools.verify.test_data import TestDataResolver
|
||||
from galaxy.tool_util.verify.test_data import TestDataResolver
|
||||
|
||||
|
||||
class ToolsUploadTestCase(api.ApiTestCase):
|
||||
|
||||
@@ -34,7 +34,7 @@ from galaxy.app import UniverseApplication as GalaxyUniverseApplication
|
||||
from galaxy.config import LOGGING_CONFIG_DEFAULT
|
||||
from galaxy.model import mapping
|
||||
from galaxy.model.tool_shed_install import mapping as toolshed_mapping
|
||||
from galaxy.tools.verify.interactor import GalaxyInteractorApi, verify_tool
|
||||
from galaxy.tool_util.verify.interactor import GalaxyInteractorApi, verify_tool
|
||||
from galaxy.util import asbool, download_to_file
|
||||
from galaxy.util.properties import load_app_properties
|
||||
from galaxy.web import buildapp
|
||||
|
||||
@@ -10,7 +10,7 @@ from unittest import skip, SkipTest, TestCase
|
||||
import pytest
|
||||
|
||||
from galaxy.tool_util.deps.commands import which
|
||||
from galaxy.tools.verify.test_data import TestDataResolver
|
||||
from galaxy.tool_util.verify.test_data import TestDataResolver
|
||||
from .api import UsesApiTestCaseMixin
|
||||
from .driver_util import GalaxyTestDriver
|
||||
|
||||
|
||||
@@ -1,4 +1,4 @@
|
||||
from galaxy.tools.verify.interactor import GalaxyInteractorApi
|
||||
from galaxy.tool_util.verify.interactor import GalaxyInteractorApi
|
||||
|
||||
|
||||
class TestCaseGalaxyInteractor(GalaxyInteractorApi):
|
||||
|
||||
@@ -23,7 +23,7 @@ from gxformat2 import (
|
||||
from pkg_resources import resource_string
|
||||
from six import StringIO
|
||||
|
||||
from galaxy.tools.verify.test_data import TestDataResolver
|
||||
from galaxy.tool_util.verify.test_data import TestDataResolver
|
||||
from galaxy.util import unicodify
|
||||
from . import api_asserts
|
||||
|
||||
|
||||
@@ -5,7 +5,7 @@ import os
|
||||
import unittest
|
||||
|
||||
from galaxy.security import idencoding
|
||||
from galaxy.tools.verify.test_data import TestDataResolver
|
||||
from galaxy.tool_util.verify.test_data import TestDataResolver
|
||||
from .driver_util import GalaxyTestDriver, setup_keep_outdir, target_url_parts
|
||||
|
||||
log = logging.getLogger(__name__)
|
||||
|
||||
@@ -11,8 +11,8 @@ except ImportError:
|
||||
from base.driver_util import setup_keep_outdir, target_url_parts
|
||||
from base.instrument import register_job_data
|
||||
from base.testcase import FunctionalTestCase # noqa: I100,I201,I202
|
||||
from galaxy.tool_util.verify.interactor import GalaxyInteractorApi, verify_tool # noqa: I201
|
||||
from galaxy.tools import DataManagerTool # noqa: I201
|
||||
from galaxy.tools.verify.interactor import GalaxyInteractorApi, verify_tool # noqa: I201
|
||||
|
||||
log = logging.getLogger(__name__)
|
||||
|
||||
|
||||
@@ -4,7 +4,7 @@ import tempfile
|
||||
|
||||
import pytest
|
||||
|
||||
from galaxy.tools.verify import (
|
||||
from galaxy.tool_util.verify import (
|
||||
files_contains,
|
||||
files_diff,
|
||||
files_re_match,
|
||||
|
||||
Reference in New Issue
Block a user