clean up fastqc updates a tiny bit

2026-09-21 13:50:20 +08:00 · 2013-05-30 15:01:29 +10:00
parent f2065f4a24
commit 941ce7d5dd
1 changed files with 1 additions and 2 deletions
@@ -62,10 +62,9 @@ class FastQC():
        infname = self.opts.inputfilename
        linf = infname.lower()
        trimext = False
-        isgz = linf.endswith('.gz') or linf.endswith('.gzip')
        # decompression at upload currently does NOT remove this now bogus ending - fastqc will barf
        # patched may 29 2013 until this is fixed properly
-        if isgz: 
+        if ( linf.endswith('.gz') or linf.endswith('.gzip') ): 
            f = gzip.open(self.opts.input)
            try:
               testrow = f.readline()