Merge pull request #3141 from nsoranzo/followup_on_3139

Fix flake8 linting broken in 7bee2651aa
This commit is contained in:
Marius van den Beek
2016-11-09 11:54:52 +01:00
committed by GitHub
3 changed files with 10 additions and 6 deletions
+1
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@@ -356,6 +356,7 @@ lib/galaxy/webapps/galaxy/controllers/tool_runner.py
lib/galaxy/webapps/galaxy/controllers/userskeys.py
lib/galaxy/webapps/galaxy/__init__.py
lib/galaxy/webapps/__init__.py
lib/galaxy/webapps/reports/config.py
lib/galaxy/webapps/reports/controllers/__init__.py
lib/galaxy/webapps/reports/controllers/query.py
lib/galaxy/webapps/reports/__init__.py
+1
View File
@@ -66,6 +66,7 @@ lib/galaxy/web/__init__.py
lib/galaxy/webapps/galaxy/api/tours.py
lib/galaxy/webapps/galaxy/api/workflows.py
lib/galaxy/webapps/galaxy/controllers/userskeys.py
lib/galaxy/webapps/reports/config.py
lib/galaxy/webapps/reports/__init__.py
lib/galaxy/webapps/tool_shed/controllers/user.py
lib/galaxy/webapps/tool_shed/__init__.py
+8 -6
View File
@@ -1,8 +1,10 @@
"""Universe configuration builder."""
import sys
import os
import logging
import ConfigParser
import os
import sys
from six.moves import configparser
from galaxy.util import string_as_bool
log = logging.getLogger( __name__ )
@@ -40,7 +42,7 @@ class Configuration( object ):
self.log_actions = string_as_bool( kwargs.get( 'log_actions', 'False' ) )
self.brand = kwargs.get( 'brand', None )
# Configuration for the message box directly below the masthead.
self.message_box_visible =string_as_bool( kwargs.get( 'message_box_visible', False ) )
self.message_box_visible = string_as_bool( kwargs.get( 'message_box_visible', False ) )
self.message_box_content = kwargs.get( 'message_box_content', None )
self.message_box_class = kwargs.get( 'message_box_class', 'info' )
self.wiki_url = kwargs.get( 'wiki_url', 'https://wiki.galaxyproject.org/' )
@@ -52,7 +54,7 @@ class Configuration( object ):
self.sentry_dsn = kwargs.get( 'sentry_dsn', None )
# Parse global_conf
global_conf = kwargs.get( 'global_conf', None )
global_conf_parser = ConfigParser.ConfigParser()
global_conf_parser = configparser.ConfigParser()
if global_conf and "__file__" in global_conf:
global_conf_parser.read(global_conf['__file__'])
@@ -84,7 +86,7 @@ def get_database_engine_options( kwargs ):
prefix = "database_engine_option_"
prefix_len = len( prefix )
rval = {}
for key, value in kwargs.iteritems():
for key, value in kwargs.items():
if key.startswith( prefix ):
key = key[prefix_len:]
if key in conversions: