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Generalize setup of chrom length files for buildbot.

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This commit is contained in:
Nate Coraor
2011-03-02 16:21:36 -05:00
parent 136bae9300
commit 8ba82ff34e
1 changed files with 7 additions and 4 deletions
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buildbot_setup.sh
+7 -4
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@@ -112,10 +112,13 @@ for dir in $DIRS; do
done
# for wig_to_bigWig and bed_to_bigBed
if [ ! -f "tool-data/shared/ucsc/chrom/hg17.len" -a -f "test-data/wig_to_bigwig_hg17.len" ]; then
mkdir -p tool-data/shared/ucsc/chrom
cp test-data/wig_to_bigwig_hg17.len tool-data/shared/ucsc/chrom/hg17.len
fi
for build in hg17 hg18; do
if [ -f "test-data/chrom/$build.len" ]; then
echo "Copying test-data/chrom/$build.len to tool-data/shared/ucsc/chrom/"
mkdir -p tool-data/shared/ucsc/chrom
cp test-data/chrom/$build.len tool-data/shared/ucsc/chrom/$build.len
fi
done
if [ -d "test-data-repo" ]; then
echo "Updating test data repository"