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Fix for JobWrapper.finish, dataset state no longer flushed prior to other attributes ( e.g., metadata) being flushed.

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This commit is contained in:
Greg Von Kuster
2008-08-01 14:25:42 -04:00
parent 61caa7ea18
commit 81bb5e4996
1 changed files with 5 additions and 5 deletions
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lib/galaxy/jobs/__init__.py
+5 -5
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@@ -400,11 +400,6 @@ class JobWrapper( object ):
else:
job.state = 'ok'
for dataset_assoc in job.output_datasets:
if stderr:
dataset_assoc.dataset.dataset.state = model.Dataset.states.ERROR
else:
dataset_assoc.dataset.dataset.state = model.Dataset.states.OK
dataset_assoc.dataset.dataset.flush()
for dataset in dataset_assoc.dataset.dataset.history_associations: #need to update all associated output hdas, i.e. history was shared with job running
dataset.blurb = 'done'
dataset.peek = 'no peek'
@@ -424,6 +419,11 @@ class JobWrapper( object ):
else:
dataset.blurb = "empty"
dataset.flush()
if stderr:
dataset_assoc.dataset.dataset.state = model.Dataset.states.ERROR
else:
dataset_assoc.dataset.dataset.state = model.Dataset.states.OK
dataset_assoc.dataset.dataset.flush()
# Save stdout and stderr
if len( stdout ) > 32768: