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Make changes in ddea56886275 compatible with python 2.4

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This commit is contained in:
Jeremy Goecks
2011-04-12 17:26:06 -04:00
parent c967bfa36d
commit 762a0becfa
1 changed files with 9 additions and 4 deletions
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lib/galaxy/datatypes/util/gff_util.py
+9 -4
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@@ -149,8 +149,9 @@ class GFFReaderWrapper( NiceReaderWrapper ):
self.seed_interval = GenomicIntervalReader.next( self )
except ParseError, e:
handle_parse_error( e )
finally:
raw_size += len( self.current_line )
# TODO: When no longer supporting python 2.4 use finally:
#finally:
raw_size += len( self.current_line )
# If header or comment, clear seed interval and return it.
if isinstance( self.seed_interval, ( Header, Comment ) ):
@@ -170,16 +171,20 @@ class GFFReaderWrapper( NiceReaderWrapper ):
while True:
try:
interval = GenomicIntervalReader.next( self )
raw_size += len( self.current_line )
except StopIteration, e:
# No more intervals to read, but last feature needs to be
# returned.
interval = None
raw_size += len( self.current_line )
break
except ParseError, e:
handle_parse_error( e )
continue
finally:
raw_size += len( self.current_line )
continue
# TODO: When no longer supporting python 2.4 use finally:
#finally:
#raw_size += len( self.current_line )
# If interval not associated with feature, break.
group = interval.attributes.get( 'group', None )