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Add test cases to cover version changes

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This commit is contained in:
guerler
2017-11-14 20:21:29 -05:00
parent 1457fa7f93
commit 75f84bfc47
1 changed files with 70 additions and 12 deletions
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lib/galaxy/tools/parameters/__init__.py
+70 -12
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@@ -40,26 +40,84 @@ def visit_input_values(inputs, input_values, callback, name_prefix='', label_pre
>>> g = BooleanToolParameter( None, XML( '<param name="g"/>' ) )
>>> h = TextToolParameter( None, XML( '<param name="h"/>' ) )
>>> i = TextToolParameter( None, XML( '<param name="i"/>' ) )
>>> b.name = 'b'
>>> j = TextToolParameter( None, XML( '<param name="j"/>' ) )
>>> a.name = 'a'
>>> b.name = b.title = 'b'
>>> c.name = 'c'
>>> d.name = d.title = 'd'
>>> e.name = 'e'
>>> f.name = 'f'
>>> g.name = 'g'
>>> h.name = 'h'
>>> j.name = 'j'
>>> b.inputs = odict([ ('c', c), ('d', d) ])
>>> d.name = 'd'
>>> d.inputs = odict([ ('e', e), ('f', f) ])
>>> f.test_param = g
>>> f.name = 'f'
>>> f.cases = [ Bunch( value='true', inputs= { 'h': h } ), Bunch( value='false', inputs= { 'i': i } ) ]
>>>
>>> def visitor( input, value, prefix, prefixed_name, **kwargs ):
... print 'name=%s, prefix=%s, prefixed_name=%s, value=%s' % ( input.name, prefix, prefixed_name, value )
>>> inputs = odict([('a',a),('b',b)])
>>> def visitor( input, value, prefix, prefixed_name, prefixed_label, error, **kwargs ):
... print 'name=%s, prefix=%s, prefixed_name=%s, prefixed_label=%s,value=%s' % ( input.name, prefix, prefixed_name, prefixed_label, value )
... if error:
... print error
>>> inputs = odict([('a', a),('b', b)])
>>> nested = odict([ ('a', 1), ('b', [ odict([('c', 3), ( 'd', [odict([ ('e', 5), ('f', odict([ ('g', True), ('h', 7) ])) ]) ])]) ]) ])
>>> visit_input_values( inputs, nested, visitor )
name=a, prefix=, prefixed_name=a, value=1
name=c, prefix=b_0|, prefixed_name=b_0|c, value=3
name=e, prefix=b_0|d_0|, prefixed_name=b_0|d_0|e, value=5
name=g, prefix=b_0|d_0|, prefixed_name=b_0|d_0|f|g, value=True
name=h, prefix=b_0|d_0|, prefixed_name=b_0|d_0|f|h, value=7
name=a, prefix=, prefixed_name=a, prefixed_label=a,value=1
name=c, prefix=b_0|, prefixed_name=b_0|c, prefixed_label=b 1 > c,value=3
name=e, prefix=b_0|d_0|, prefixed_name=b_0|d_0|e, prefixed_label=b 1 > d 1 > e,value=5
name=g, prefix=b_0|d_0|, prefixed_name=b_0|d_0|f|g, prefixed_label=b 1 > d 1 > g,value=True
name=h, prefix=b_0|d_0|, prefixed_name=b_0|d_0|f|h, prefixed_label=b 1 > d 1 > h,value=7
>>> params_from_strings( inputs, params_to_strings( inputs, nested, None ), None )[ 'b' ][ 0 ][ 'd' ][ 0 ][ 'f' ][ 'g' ] is True
True
>>> # Conditional test parameter value does not match any case, warning is shown and child values are not visited
>>> f.test_param = j
>>> nested['b'][0]['d'][0]['f']['j'] = 'j'
>>> visit_input_values( inputs, nested, visitor )
name=a, prefix=, prefixed_name=a, prefixed_label=a,value=1
name=c, prefix=b_0|, prefixed_name=b_0|c, prefixed_label=b 1 > c,value=3
name=e, prefix=b_0|d_0|, prefixed_name=b_0|d_0|e, prefixed_label=b 1 > d 1 > e,value=5
name=j, prefix=b_0|d_0|, prefixed_name=b_0|d_0|f|j, prefixed_label=b 1 > d 1 > j,value=j
The selected case is unavailable/invalid.
>>> # Conditional test parameter missing from state, value error
>>> del nested['b'][0]['d'][0]['f']['j']
>>> visit_input_values( inputs, nested, visitor )
name=a, prefix=, prefixed_name=a, prefixed_label=a,value=1
name=c, prefix=b_0|, prefixed_name=b_0|c, prefixed_label=b 1 > c,value=3
name=e, prefix=b_0|d_0|, prefixed_name=b_0|d_0|e, prefixed_label=b 1 > d 1 > e,value=5
name=j, prefix=b_0|d_0|, prefixed_name=b_0|d_0|f|j, prefixed_label=b 1 > d 1 > j,value=None
No value found for 'b 1 > d 1 > j'.
>>> # Conditional parameter missing from state, value error
>>> del nested['b'][0]['d'][0]['f']
>>> visit_input_values( inputs, nested, visitor )
name=a, prefix=, prefixed_name=a, prefixed_label=a,value=1
name=c, prefix=b_0|, prefixed_name=b_0|c, prefixed_label=b 1 > c,value=3
name=e, prefix=b_0|d_0|, prefixed_name=b_0|d_0|e, prefixed_label=b 1 > d 1 > e,value=5
name=j, prefix=b_0|d_0|, prefixed_name=b_0|d_0|f|j, prefixed_label=b 1 > d 1 > j,value=None
No value found for 'b 1 > d 1 > j'.
>>> # Conditional input name has changed due to version change, key error
>>> f.name = 'f_1'
>>> visit_input_values( inputs, nested, visitor )
name=a, prefix=, prefixed_name=a, prefixed_label=a,value=1
name=c, prefix=b_0|, prefixed_name=b_0|c, prefixed_label=b 1 > c,value=3
name=e, prefix=b_0|d_0|, prefixed_name=b_0|d_0|e, prefixed_label=b 1 > d 1 > e,value=5
name=j, prefix=b_0|d_0|, prefixed_name=b_0|d_0|f_1|j, prefixed_label=b 1 > d 1 > j,value=None
No value found for 'b 1 > d 1 > j'.
>>> # Other parameters are missing from state
>>> nested = odict([ ('b', [ odict([ ( 'd', [odict([ ('f', odict([ ('g', True), ('h', 7) ])) ]) ])]) ]) ])
>>> visit_input_values( inputs, nested, visitor )
name=a, prefix=, prefixed_name=a, prefixed_label=a,value=None
No value found for 'a'.
name=c, prefix=b_0|, prefixed_name=b_0|c, prefixed_label=b 1 > c,value=None
No value found for 'b 1 > c'.
name=e, prefix=b_0|d_0|, prefixed_name=b_0|d_0|e, prefixed_label=b 1 > d 1 > e,value=None
No value found for 'b 1 > d 1 > e'.
name=j, prefix=b_0|d_0|, prefixed_name=b_0|d_0|f_1|j, prefixed_label=b 1 > d 1 > j,value=None
No value found for 'b 1 > d 1 > j'.
"""
def callback_helper(input, input_values, name_prefix, label_prefix, parent_prefix, context=None, error=None):
args = {
@@ -85,7 +143,7 @@ def visit_input_values(inputs, input_values, callback, name_prefix='', label_pre
def get_current_case(input, input_values):
try:
return input.get_current_case(input_values[input.test_param.name])
except (KeyError, ValueError) as e:
except (KeyError, ValueError):
return -1
context = ExpressionContext(input_values, context)