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Augment ftp popover view, add refresh button to ftp view

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This commit is contained in:
guerler
2017-08-29 10:16:24 -04:00
parent bac5299a45
commit 7496d66628
11 changed files with 85 additions and 70 deletions
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client/galaxy/scripts/mvc/upload/ftp/ftp-view.js
+4 -3
View File
@@ -40,9 +40,10 @@ function( Utils, Select, Ui, UploadModel, UploadFtp, UploadExtension ) {
this.$( '.upload-box' ).append( this.ftp_list.$el );
// append buttons to dom
this.btnStart = new Ui.Button( { id: 'btn-start', title: 'Start', onclick: function() { self._eventStart() } } );
this.btnClose = new Ui.Button( { id: 'btn-close', title: 'Close', onclick: function() { self.app.modal.hide() } } );
_.each( [ this.btnStart, this.btnClose ], function( button ) {
this.btnStart = new Ui.Button( { id: 'btn-start', title: 'Start', onclick: function() { self._eventStart() } } );
this.btnRefresh = new Ui.Button( { id: 'btn-refresh', title: 'Refresh', onclick: function() { self.ftp_list.render() } } );
this.btnClose = new Ui.Button( { id: 'btn-close', title: 'Close', onclick: function() { self.app.modal.hide() } } );
_.each( [ this.btnRefresh, this.btnStart, this.btnClose ], function( button ) {
self.$( '.upload-buttons' ).prepend( button.$el );
});
client/galaxy/scripts/mvc/upload/upload-ftp.js
+68 -55
View File
@@ -15,45 +15,65 @@ define( [ 'utils/utils' ], function( Utils ) {
} );
this.collection = this.options.collection;
this.setElement( this._template() );
this.rows = [];
Utils.get({
this.$content = this.$( '.upload-ftp-content' );
this.$wait = this.$( '.upload-ftp-wait' );
this.$help = this.$( '.upload-ftp-help' );
this.$number = this.$( '.upload-ftp-number' );
this.$disk = this.$( '.upload-ftp-disk' );
this.$body = this.$( '.upload-ftp-body' );
this.$warning = this.$( '.upload-ftp-warning' );
this.$select = this.$( '.upload-ftp-select-all' );
this.render();
},
render: function() {
var self = this;
this.$wait.show();
this.$content.hide();
this.$warning.hide();
this.$help.hide();
$.ajax({
url : Galaxy.root + 'api/remote_files',
success : function( ftp_files ) { self._fill( ftp_files ) },
error : function() { self._fill(); }
method : 'GET',
success : function( ftp_files ) { self._renderTable( ftp_files ) },
error : function() { self._renderTable() }
});
},
/** Fill table with ftp entries */
_fill: function( ftp_files ) {
_renderTable: function( ftp_files ) {
this.rows = [];
if ( ftp_files && ftp_files.length > 0 ) {
this.$( '.upload-ftp-content' ).html( $( this._templateTable() ) );
this.$body.empty();
var size = 0;
for (var index in ftp_files ) {
this.rows.push( this._add( ftp_files[ index ] ) );
size += ftp_files[ index ].size;
}
this.$( '.upload-ftp-number' ).html( ftp_files.length + ' files' );
this.$( '.upload-ftp-disk' ).html( Utils.bytesToString ( size, true ) );
this.$number.html( ftp_files.length + ' files' );
this.$disk.html( Utils.bytesToString ( size, true ) );
if ( this.collection ) {
var self = this;
this.$( '._has_collection' ).show();
this.$select_all = this.$( '.upload-selectall' ).addClass( this.options.class_add );
this.$select_all.on( 'click', function() {
var add = self.$select_all.hasClass( self.options.class_add );
for (var index in ftp_files ) {
var ftp_file = ftp_files[ index ];
var model_index = self._find( ftp_file );
if( !model_index && add || model_index && !add ) {
self.rows[ index ].trigger( 'click' );
}
}
});
this.$select.addClass( this.options.class_add )
.on( 'click', function() {
var add = self.$select.hasClass( self.options.class_add );
for (var index in ftp_files ) {
var ftp_file = ftp_files[ index ];
var model_index = self._find( ftp_file );
if( !model_index && add || model_index && !add ) {
self.rows[ index ].trigger( 'click' );
}
}
});
this._refresh();
}
this.$content.show();
} else {
this.$( '.upload-ftp-content' ).html( $( this._templateInfo() ) );
this.$warning.show();
}
this.$( '.upload-ftp-wait' ).hide();
this.$help.show();
this.$wait.hide();
},
/** Add file to table */
@@ -61,7 +81,7 @@ define( [ 'utils/utils' ], function( Utils ) {
var self = this;
var $it = $( this._templateRow( ftp_file ) );
var $icon = $it.find( '.icon' );
this.$( 'tbody' ).append( $it );
this.$body.append( $it );
if ( this.collection ) {
$icon.addClass( this._find( ftp_file ) ? this.options.class_remove : this.options.class_add );
$it.on('click', function() {
@@ -85,11 +105,11 @@ define( [ 'utils/utils' ], function( Utils ) {
/** Refresh select all button state */
_refresh: function() {
var filtered = this.collection.where( { file_mode: 'ftp', enabled: true } );
this.$select_all.removeClass();
this.$select.removeClass();
if ( filtered.length == 0 ) {
this.$select_all.addClass( this.options.class_add );
this.$select.addClass( this.options.class_add );
} else {
this.$select_all.addClass( filtered.length == this.rows.length ? this.options.class_remove : this.options.class_partial );
this.$select.addClass( filtered.length == this.rows.length ? this.options.class_remove : this.options.class_partial );
}
},
@@ -113,41 +133,34 @@ define( [ 'utils/utils' ], function( Utils ) {
'</tr>';
},
/** Template of table */
_templateTable: function() {
return '<span style="whitespace: nowrap; float: left;">Available files: </span>' +
'<span style="whitespace: nowrap; float: right;">' +
'<span class="upload-icon fa fa-file-text-o"/>' +
'<span class="upload-ftp-number"/>&nbsp;&nbsp;' +
'<span class="upload-icon fa fa-hdd-o"/>' +
'<span class="upload-ftp-disk"/>' +
'</span>' +
'<table class="grid" style="float: left;">' +
'<thead>' +
'<tr>' +
'<th class="_has_collection" style="display: none;"><div class="upload-selectall"></th>' +
'<th>Name</th>' +
'<th>Size</th>' +
'<th>Created</th>' +
'</tr>' +
'</thead>' +
'<tbody/>' +
'</table>';
},
/** Template of info message */
_templateInfo: function() {
return '<div class="upload-ftp-warning warningmessage">' +
'Your FTP directory does not contain any files.' +
'</div>';
},
/** Template of main view */
_template: function() {
return '<div class="' + this.options.css + '">' +
'<div class="upload-ftp-wait fa fa-spinner fa-spin"/>' +
'<div class="upload-ftp-help">This Galaxy server allows you to upload files via FTP. To upload some files, log in to the FTP server at <strong>' + this.options.ftp_upload_site + '</strong> using your Galaxy credentials (email address and password).</div>' +
'<div class="upload-ftp-content"/>' +
'<div class="upload-ftp-content">' +
'<span style="whitespace: nowrap; float: left;">Available files: </span>' +
'<span style="whitespace: nowrap; float: right;">' +
'<span class="upload-icon fa fa-file-text-o"/>' +
'<span class="upload-ftp-number"/>&nbsp;&nbsp;' +
'<span class="upload-icon fa fa-hdd-o"/>' +
'<span class="upload-ftp-disk"/>' +
'</span>' +
'<table class="grid" style="float: left;">' +
'<thead>' +
'<tr>' +
'<th class="_has_collection" style="display: none;"><div class="upload-ftp-select-all"></th>' +
'<th>Name</th>' +
'<th>Size</th>' +
'<th>Created</th>' +
'</tr>' +
'</thead>' +
'<tbody class="upload-ftp-body"/>' +
'</table>' +
'</div>' +
'<div class="upload-ftp-warning warningmessage">' +
'Your FTP directory does not contain any files.' +
'</div>'
'<div>';
}
});
client/galaxy/style/less/upload.less
+2 -1
View File
@@ -194,6 +194,7 @@
}
.upload-ftp-base {
position: relative;
.upload-ftp-wait {
font-size: 1.2em;
position: absolute;
@@ -205,7 +206,7 @@
}
.upload-ftp-warning {
text-align: center;
margin-top: 20px;
margin-top: 50px;
}
.upload-ftp-row {
cursor: pointer;
static/maps/mvc/upload/ftp/ftp-view.js.map
+1 -1
View File
@@ -1 +1 @@
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static/maps/mvc/upload/upload-ftp.js.map
+1 -1
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static/scripts/bundled/analysis.bundled.js
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static/scripts/mvc/upload/ftp/ftp-view.js
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define(["utils/utils","mvc/ui/ui-select","mvc/ui/ui-misc","mvc/upload/upload-model","mvc/upload/upload-ftp","mvc/upload/upload-extension","utils/uploadbox"],function(a,b,c,d,e,f){return Backbone.View.extend({collection:new d.Collection,initialize:function(d){var g=this;this.app=d,this.options=d.options,this.list_extensions=d.list_extensions,this.list_genomes=d.list_genomes,this.ftp_upload_site=d.currentFtp(),this.setElement(this._template()),this.ftp_list=new e({css:"upload-ftp-full",collection:this.collection,ftp_upload_site:this.ftp_upload_site,onadd:function(b){g.collection.add({id:a.uid(),mode:"ftp",name:b.path,path:b.path,file_mode:"ftp",file_name:b.path,file_size:b.size,file_path:b.path,enabled:!0})},onremove:function(a){g.collection.remove(a)}}),this.$(".upload-box").append(this.ftp_list.$el),this.btnStart=new c.Button({id:"btn-start",title:"Start",onclick:function(){g._eventStart()}}),this.btnClose=new c.Button({id:"btn-close",title:"Close",onclick:function(){g.app.modal.hide()}}),_.each([this.btnStart,this.btnClose],function(a){g.$(".upload-buttons").prepend(a.$el)}),this.select_extension=new b.View({css:"upload-footer-selection",container:this.$(".upload-footer-extension"),data:_.filter(this.list_extensions,function(a){return!a.composite_files}),value:this.options.default_extension,onchange:function(a){g.model.set("extension",a)}}),this.select_genome=new b.View({css:"upload-footer-selection",container:this.$(".upload-footer-genome"),data:this.list_genomes,value:this.options.default_genome,onchange:function(a){g.model.set("genome",a)}}),this.$(".upload-footer-extension-info").on("click",function(a){new f({$el:$(a.target),title:g.select_extension.text(),extension:g.select_extension.value(),list:g.list_extensions,placement:"top"})}).on("mousedown",function(a){a.preventDefault()}),this.listenTo(this.collection,"add remove",this.render,this),this.render()},_eventStart:function(){var a=this;this.collection.each(function(b){b.set({genome:a.select_genome.value(),extension:a.select_extension.value()})}),$.uploadpost({url:this.app.options.nginx_upload_path,data:this.app.toData(this.collection.filter()),success:function(b){a._eventSuccess(b)},error:function(a){window.console.log(a)}})},_eventSuccess:function(){Galaxy.currHistoryPanel.refreshContents()},render:function(){this.collection.length>0?(this.btnStart.enable(),this.btnStart.$el.addClass("btn-primary")):(this.btnStart.disable(),this.btnStart.$el.removeClass("btn-primary"))},_template:function(){return'<div class="upload-view-default"><div class="upload-top"><h6 class="upload-top-info"/></div><div class="upload-box upload-box-solid"/><div class="upload-footer"><span class="upload-footer-title">Type (for all):</span><span class="upload-footer-extension"/><span class="upload-footer-extension-info upload-icon-button fa fa-search"/> <span class="upload-footer-title">Genome (for all):</span><span class="upload-footer-genome"/></div><div class="upload-buttons"/></div>'}})});
define(["utils/utils","mvc/ui/ui-select","mvc/ui/ui-misc","mvc/upload/upload-model","mvc/upload/upload-ftp","mvc/upload/upload-extension","utils/uploadbox"],function(a,b,c,d,e,f){return Backbone.View.extend({collection:new d.Collection,initialize:function(d){var g=this;this.app=d,this.options=d.options,this.list_extensions=d.list_extensions,this.list_genomes=d.list_genomes,this.ftp_upload_site=d.currentFtp(),this.setElement(this._template()),this.ftp_list=new e({css:"upload-ftp-full",collection:this.collection,ftp_upload_site:this.ftp_upload_site,onadd:function(b){g.collection.add({id:a.uid(),mode:"ftp",name:b.path,path:b.path,file_mode:"ftp",file_name:b.path,file_size:b.size,file_path:b.path,enabled:!0})},onremove:function(a){g.collection.remove(a)}}),this.$(".upload-box").append(this.ftp_list.$el),this.btnStart=new c.Button({id:"btn-start",title:"Start",onclick:function(){g._eventStart()}}),this.btnRefresh=new c.Button({id:"btn-refresh",title:"Refresh",onclick:function(){g.ftp_list.render()}}),this.btnClose=new c.Button({id:"btn-close",title:"Close",onclick:function(){g.app.modal.hide()}}),_.each([this.btnRefresh,this.btnStart,this.btnClose],function(a){g.$(".upload-buttons").prepend(a.$el)}),this.select_extension=new b.View({css:"upload-footer-selection",container:this.$(".upload-footer-extension"),data:_.filter(this.list_extensions,function(a){return!a.composite_files}),value:this.options.default_extension,onchange:function(a){g.model.set("extension",a)}}),this.select_genome=new b.View({css:"upload-footer-selection",container:this.$(".upload-footer-genome"),data:this.list_genomes,value:this.options.default_genome,onchange:function(a){g.model.set("genome",a)}}),this.$(".upload-footer-extension-info").on("click",function(a){new f({$el:$(a.target),title:g.select_extension.text(),extension:g.select_extension.value(),list:g.list_extensions,placement:"top"})}).on("mousedown",function(a){a.preventDefault()}),this.listenTo(this.collection,"add remove",this.render,this),this.render()},_eventStart:function(){var a=this;this.collection.each(function(b){b.set({genome:a.select_genome.value(),extension:a.select_extension.value()})}),$.uploadpost({url:this.app.options.nginx_upload_path,data:this.app.toData(this.collection.filter()),success:function(b){a._eventSuccess(b)},error:function(a){window.console.log(a)}})},_eventSuccess:function(){Galaxy.currHistoryPanel.refreshContents()},render:function(){this.collection.length>0?(this.btnStart.enable(),this.btnStart.$el.addClass("btn-primary")):(this.btnStart.disable(),this.btnStart.$el.removeClass("btn-primary"))},_template:function(){return'<div class="upload-view-default"><div class="upload-top"><h6 class="upload-top-info"/></div><div class="upload-box upload-box-solid"/><div class="upload-footer"><span class="upload-footer-title">Type (for all):</span><span class="upload-footer-extension"/><span class="upload-footer-extension-info upload-icon-button fa fa-search"/> <span class="upload-footer-title">Genome (for all):</span><span class="upload-footer-genome"/></div><div class="upload-buttons"/></div>'}})});
//# sourceMappingURL=../../../../maps/mvc/upload/ftp/ftp-view.js.map
static/scripts/mvc/upload/upload-ftp.js
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define(["utils/utils"],function(a){return Backbone.View.extend({initialize:function(b){var c=this;this.options=a.merge(b,{css:"upload-ftp",class_add:"upload-icon-button fa fa-square-o",class_remove:"upload-icon-button fa fa-check-square-o",class_partial:"upload-icon-button fa fa-minus-square-o",collection:null,onchange:function(){},onadd:function(){},onremove:function(){}}),this.collection=this.options.collection,this.setElement(this._template()),this.rows=[],a.get({url:Galaxy.root+"api/remote_files",success:function(a){c._fill(a)},error:function(){c._fill()}})},_fill:function(b){if(b&&b.length>0){this.$(".upload-ftp-content").html($(this._templateTable()));var c=0;for(var d in b)this.rows.push(this._add(b[d])),c+=b[d].size;if(this.$(".upload-ftp-number").html(b.length+" files"),this.$(".upload-ftp-disk").html(a.bytesToString(c,!0)),this.collection){var e=this;this.$("._has_collection").show(),this.$select_all=this.$(".upload-selectall").addClass(this.options.class_add),this.$select_all.on("click",function(){var a=e.$select_all.hasClass(e.options.class_add);for(var c in b){var d=b[c],f=e._find(d);(!f&&a||f&&!a)&&e.rows[c].trigger("click")}}),this._refresh()}}else this.$(".upload-ftp-content").html($(this._templateInfo()));this.$(".upload-ftp-wait").hide()},_add:function(a){var b=this,c=$(this._templateRow(a)),d=c.find(".icon");return this.$("tbody").append(c),this.collection?(d.addClass(this._find(a)?this.options.class_remove:this.options.class_add),c.on("click",function(){var c=b._find(a);d.removeClass(),c?(b.options.onremove(c),d.addClass(b.options.class_add)):(b.options.onadd(a),d.addClass(b.options.class_remove)),b._refresh()})):c.on("click",function(){b.options.onchange(a)}),c},_refresh:function(){var a=this.collection.where({file_mode:"ftp",enabled:!0});this.$select_all.removeClass(),this.$select_all.addClass(0==a.length?this.options.class_add:a.length==this.rows.length?this.options.class_remove:this.options.class_partial)},_find:function(a){var b=this.collection.findWhere({file_path:a.path,file_mode:"ftp",enabled:!0});return b&&b.get("id")},_templateRow:function(b){return'<tr class="upload-ftp-row"><td class="_has_collection" style="display: none;"><div class="icon"/></td><td class="ftp-name">'+_.escape(b.path)+'</td><td class="ftp-size">'+a.bytesToString(b.size)+'</td><td class="ftp-time">'+b.ctime+"</td></tr>"},_templateTable:function(){return'<span style="whitespace: nowrap; float: left;">Available files: </span><span style="whitespace: nowrap; float: right;"><span class="upload-icon fa fa-file-text-o"/><span class="upload-ftp-number"/>&nbsp;&nbsp;<span class="upload-icon fa fa-hdd-o"/><span class="upload-ftp-disk"/></span><table class="grid" style="float: left;"><thead><tr><th class="_has_collection" style="display: none;"><div class="upload-selectall"></th><th>Name</th><th>Size</th><th>Created</th></tr></thead><tbody/></table>'},_templateInfo:function(){return'<div class="upload-ftp-warning warningmessage">Your FTP directory does not contain any files.</div>'},_template:function(){return'<div class="'+this.options.css+'"><div class="upload-ftp-wait fa fa-spinner fa-spin"/><div class="upload-ftp-help">This Galaxy server allows you to upload files via FTP. To upload some files, log in to the FTP server at <strong>'+this.options.ftp_upload_site+'</strong> using your Galaxy credentials (email address and password).</div><div class="upload-ftp-content"/><div>'}})});
define(["utils/utils"],function(a){return Backbone.View.extend({initialize:function(b){this.options=a.merge(b,{css:"upload-ftp",class_add:"upload-icon-button fa fa-square-o",class_remove:"upload-icon-button fa fa-check-square-o",class_partial:"upload-icon-button fa fa-minus-square-o",collection:null,onchange:function(){},onadd:function(){},onremove:function(){}}),this.collection=this.options.collection,this.setElement(this._template()),this.$content=this.$(".upload-ftp-content"),this.$wait=this.$(".upload-ftp-wait"),this.$help=this.$(".upload-ftp-help"),this.$number=this.$(".upload-ftp-number"),this.$disk=this.$(".upload-ftp-disk"),this.$body=this.$(".upload-ftp-body"),this.$warning=this.$(".upload-ftp-warning"),this.$select=this.$(".upload-ftp-select-all"),this.render()},render:function(){var a=this;this.$wait.show(),this.$content.hide(),this.$warning.hide(),this.$help.hide(),$.ajax({url:Galaxy.root+"api/remote_files",method:"GET",success:function(b){a._renderTable(b)},error:function(){a._renderTable()}})},_renderTable:function(b){if(this.rows=[],b&&b.length>0){this.$body.empty();var c=0;for(var d in b)this.rows.push(this._add(b[d])),c+=b[d].size;if(this.$number.html(b.length+" files"),this.$disk.html(a.bytesToString(c,!0)),this.collection){var e=this;this.$("._has_collection").show(),this.$select.addClass(this.options.class_add).on("click",function(){var a=e.$select.hasClass(e.options.class_add);for(var c in b){var d=b[c],f=e._find(d);(!f&&a||f&&!a)&&e.rows[c].trigger("click")}}),this._refresh()}this.$content.show()}else this.$warning.show();this.$help.show(),this.$wait.hide()},_add:function(a){var b=this,c=$(this._templateRow(a)),d=c.find(".icon");return this.$body.append(c),this.collection?(d.addClass(this._find(a)?this.options.class_remove:this.options.class_add),c.on("click",function(){var c=b._find(a);d.removeClass(),c?(b.options.onremove(c),d.addClass(b.options.class_add)):(b.options.onadd(a),d.addClass(b.options.class_remove)),b._refresh()})):c.on("click",function(){b.options.onchange(a)}),c},_refresh:function(){var a=this.collection.where({file_mode:"ftp",enabled:!0});this.$select.removeClass(),this.$select.addClass(0==a.length?this.options.class_add:a.length==this.rows.length?this.options.class_remove:this.options.class_partial)},_find:function(a){var b=this.collection.findWhere({file_path:a.path,file_mode:"ftp",enabled:!0});return b&&b.get("id")},_templateRow:function(b){return'<tr class="upload-ftp-row"><td class="_has_collection" style="display: none;"><div class="icon"/></td><td class="ftp-name">'+_.escape(b.path)+'</td><td class="ftp-size">'+a.bytesToString(b.size)+'</td><td class="ftp-time">'+b.ctime+"</td></tr>"},_template:function(){return'<div class="'+this.options.css+'"><div class="upload-ftp-wait fa fa-spinner fa-spin"/><div class="upload-ftp-help">This Galaxy server allows you to upload files via FTP. To upload some files, log in to the FTP server at <strong>'+this.options.ftp_upload_site+'</strong> using your Galaxy credentials (email address and password).</div><div class="upload-ftp-content"><span style="whitespace: nowrap; float: left;">Available files: </span><span style="whitespace: nowrap; float: right;"><span class="upload-icon fa fa-file-text-o"/><span class="upload-ftp-number"/>&nbsp;&nbsp;<span class="upload-icon fa fa-hdd-o"/><span class="upload-ftp-disk"/></span><table class="grid" style="float: left;"><thead><tr><th class="_has_collection" style="display: none;"><div class="upload-ftp-select-all"></th><th>Name</th><th>Size</th><th>Created</th></tr></thead><tbody class="upload-ftp-body"/></table></div><div class="upload-ftp-warning warningmessage">Your FTP directory does not contain any files.</div>'}})});
//# sourceMappingURL=../../../maps/mvc/upload/upload-ftp.js.map
static/style/blue/base.css
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