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Merge pull request #5343 from ValentinChCloud/fixes

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[17.09] Fix tool-shed-config-validate
This commit is contained in:
Martin Cech
2018-01-25 10:30:55 -05:00
committed by GitHub
parent 7996a4c0c7 747309b278
commit 73418ab787
1 changed files with 8 additions and 9 deletions
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lib/galaxy/webapps/config_manage.py
+8 -9
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@@ -397,15 +397,14 @@ def _lint(args, app_desc):
def _validate(args, app_desc):
path = _find_config(args, app_desc)
with open(path, "r") as f:
# Allow empty mapping (not allowed by pykawlify)
raw_config = _order_load_path(f)
if raw_config.get(app_desc.app_name, None) is None:
raw_config[app_desc.app_name] = {}
config_p = tempfile.NamedTemporaryFile(delete=False, suffix=".yml")
_ordered_dump(raw_config, config_p)
config_p.flush()
path = config_p.name
# Allow empty mapping (not allowed by pykawlify)
raw_config = _order_load_path(path)
if raw_config.get(app_desc.app_name, None) is None:
raw_config[app_desc.app_name] = {}
config_p = tempfile.NamedTemporaryFile(delete=False, suffix=".yml")
_ordered_dump(raw_config, config_p)
config_p.flush()
path = config_p.name
fp = tempfile.NamedTemporaryFile(delete=False, suffix=".yml")
_ordered_dump(app_desc.schema.raw_schema, fp)