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Simplify PREPARE_DIRS logic

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mvdbeek
2020-01-22 09:35:57 +01:00
parent 28277d2b67
commit 71788d099c
1 changed files with 2 additions and 2 deletions
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lib/galaxy/jobs/command_factory.py
+2 -2
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@@ -20,12 +20,12 @@ SETUP_GALAXY_FOR_METADATA = """
[ "$GALAXY_VIRTUAL_ENV" = "None" ] && GALAXY_VIRTUAL_ENV="$_GALAXY_VIRTUAL_ENV"; _galaxy_setup_environment True
"""
PREPARE_DIRS = """mkdir -p working outputs
if [ -f .job_started ]; then
if [ -d _working ]; then
rm -rf working/ outputs/; cp -R _working working; cp -R _outputs outputs
else
cp -R working _working; cp -R outputs _outputs
fi
touch .job_started; cd working"""
cd working"""
def build_command(