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Simplify code

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This commit is contained in:
Nicola Soranzo
2018-11-07 18:57:06 +00:00
committed by GitHub
parent 0bc6e35ad6
commit 6dd098f747
1 changed files with 5 additions and 10 deletions
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lib/galaxy/datatypes/text.py
+5 -10
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@@ -254,17 +254,12 @@ class Biom1(Json):
try:
metadata_value = json_dict.get(b_name, None)
if b_name == "columns" and metadata_value:
mks = metadata_value[0]['metadata'].keys()
keep_columns = {mk: None for mk in mks}
keep_columns = set()
for column in metadata_value:
for k in column['metadata']:
if column['metadata'][k] is not None:
keep_columns[k] = 1
final_list = []
for k in keep_columns:
if keep_columns[k] is not None:
final_list.append(k)
final_list.sort()
for k, v in column['metadata'].items():
if v is not None:
keep_columns.add(k)
final_list = sorted(list(keep_columns))
dataset.metadata.table_column_metadata_headers = final_list
if b_name in b_transform:
metadata_value = b_transform[b_name](metadata_value)