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Merge pull request #133 from blankenberg/genomespace_export_filename_no_slash

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Fix for GenomeSpace Exporter no longer allowing filenames to contain slashes.
This commit is contained in:
Dannon Baker
2015-04-21 08:13:31 -04:00
parent a2ba53f2c6 64fb5d15c1
commit 696223fbe3
2 changed files with 2 additions and 1 deletions
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tools/genomespace/genomespace_exporter.py
+1
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@@ -213,6 +213,7 @@ def galaxy_code_get_genomespace_folders( genomespace_site='prod', trans=None, va
def send_file_to_genomespace( genomespace_site, username, token, source_filename, target_directory, target_filename, file_type, content_type, log_filename ):
target_filename = target_filename.replace( '/', '-' ) # Slashes no longer allowed in filenames
url_opener = get_cookie_opener( username, token )
genomespace_site_dict = get_genomespace_site_urls()[ genomespace_site ]
dm_url = genomespace_site_dict['dmServer']
tools/genomespace/genomespace_exporter.xml
+1 -1
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@@ -1,5 +1,5 @@
<?xml version="1.0"?>
<tool name="GenomeSpace Exporter" id="genomespace_exporter" require_login="True" version="0.0.3">
<tool name="GenomeSpace Exporter" id="genomespace_exporter" require_login="True" version="0.0.4">
<description> - send data to GenomeSpace</description>
<command interpreter="python">genomespace_exporter.py
--genomespace_site "prod"