more realtime to interactivetools name changes

This commit is contained in:
Daniel Blankenberg
2019-08-20 16:58:55 -04:00
parent a3167bd3b9
commit 55c929768c
3 changed files with 9 additions and 8 deletions
@@ -12,8 +12,8 @@ uwsgi:
module: galaxy.webapps.galaxy.buildapp:uwsgi_app()
realtime_map: database/realtime_map.sqlite
python-raw: scripts/realtime/key_type_token_mapping.py
interactivetools_map: database/interactivetools_map.sqlite
python-raw: scripts/interactivetools/key_type_token_mapping.py
route-host: ^([A-Za-z0-9]+(?:-[A-Za-z0-9]+)*)\.([A-Za-z0-9]+(?:-[A-Za-z0-9]+)*)\.([A-Za-z0-9]+(?:-[A-Za-z0-9]+)*)\.(realtime\.localhost:8080)$ goto:realtime
route-run: goto:endendend
route-label: realtime
@@ -28,8 +28,8 @@ galaxy:
# outputs_to_working_directory will provide you with a better level of isolation. It is highly recommended to set
# this parameter with InteractiveTools.
outputs_to_working_directory: true
realtime_prefix: realtime
realtime_map: database/realtime_map.sqlite
interactivetools_prefix: realtime
interactivetools_map: database/interactivetools_map.sqlite
# If you develop InteractiveTools locally and do not have a full FQDN you can
# use an arbritrary one, e.g. 'my-hostname' here, if you set this hostname in your
# job_conf.xml as well (see the corresponding comment).
+4 -3
View File
@@ -708,8 +708,7 @@ class GalaxyAppConfiguration(BaseAppConfiguration):
self.fluent_log = string_as_bool(kwargs.get('fluent_log', False))
self.fluent_host = kwargs.get('fluent_host', 'localhost')
self.fluent_port = int(kwargs.get('fluent_port', 24224))
# RealTimeTools propagator mapping file
self.realtime_map = self.resolve_path(kwargs.get("realtime_map", "database/realtime_map.sqlite"))
# directory where the visualization registry searches for plugins
self.visualization_plugins_directory = kwargs.get(
'visualization_plugins_directory', 'config/plugins/visualizations')
@@ -736,7 +735,9 @@ class GalaxyAppConfiguration(BaseAppConfiguration):
self.dynamic_proxy_golang_docker_address = kwargs.get("dynamic_proxy_golang_docker_address", "unix:///var/run/docker.sock")
self.dynamic_proxy_golang_api_key = kwargs.get("dynamic_proxy_golang_api_key", None)
self.realtime_prefix = kwargs.get("realtime_prefix", "realtime")
# InteractiveTools propagator mapping file
self.realtime_map = self.resolve_path(kwargs.get("interactivetools_map", "database/interactivetools_map.sqlite"))
self.realtime_prefix = kwargs.get("interactivetools_prefix", "realtime")
self.interactivetools_enable = string_as_bool(kwargs.get('interactivetools_enable', False))
# Default chunk size for chunkable datatypes -- 64k
@@ -6,7 +6,7 @@ from time import time
import uwsgi
realtime_db_file = uwsgi.opt["realtime_map"]
realtime_db_file = uwsgi.opt["interactivetools_map"]
db_conn = sqlite3.connect(realtime_db_file)