mirror of
https://github.com/galaxyproject/galaxy.git
synced 2026-10-16 15:45:04 +08:00
Refactor modal logic out of core MarkdownHelp component.
This commit is contained in:
@@ -33,7 +33,7 @@
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</div>
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</div>
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</div>
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<MarkdownHelp ref="help" :mode="mode" />
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<MarkdownHelpModal ref="help" :mode="mode" />
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</div>
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</template>
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@@ -46,7 +46,7 @@ import FlexPanel from "components/Panels/FlexPanel";
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import _ from "underscore";
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import Vue from "vue";
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import MarkdownHelp from "./MarkdownHelp";
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import MarkdownHelpModal from "./MarkdownHelpModal";
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import MarkdownToolBox from "./MarkdownToolBox";
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Vue.use(BootstrapVue);
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@@ -60,7 +60,7 @@ export default {
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MarkdownToolBox,
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FlexPanel,
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FontAwesomeIcon,
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MarkdownHelp,
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MarkdownHelpModal,
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},
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props: {
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markdownText: {
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@@ -1,5 +1,5 @@
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<script setup lang="ts">
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import { computed, ref } from "vue";
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import { computed } from "vue";
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import DirectiveHelpSection from "./DirectiveHelpSection.vue";
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@@ -9,163 +9,143 @@ interface MarkdownHelpProps {
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const props = defineProps<MarkdownHelpProps>();
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const show = ref(false);
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const page = computed(() => props.mode == "page");
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const title = computed(() => {
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if (page.value) {
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return "Markdown Help for Pages";
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} else {
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return "Markdown Help for Invocation Reports";
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}
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});
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function showMarkdownHelp() {
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show.value = true;
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}
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defineExpose({
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showMarkdownHelp,
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});
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</script>
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<template>
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<b-modal v-model="show" hide-footer>
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<template v-slot:modal-title>
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<h2 class="mb-0">{{ title }}</h2>
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</template>
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<div>
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<h3>Overview</h3>
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<p>
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<span v-if="page"> This Markdown document will be used to generate your Galaxy Page. </span>
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<span v-else> This Markdown document will be used to generate your workflow invocation report. </span>
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This document should be Markdown with embedded commands for extracting and displaying Galaxy objects
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and/or their metadata.
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</p>
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<div>
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<h3>Overview</h3>
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<p>
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<span v-if="page"> This Markdown document will be used to generate your Galaxy Page. </span>
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<span v-else> This Markdown document will be used to generate your workflow invocation report. </span>
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This document should be Markdown with embedded commands for extracting and displaying Galaxy objects and/or
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their metadata.
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</p>
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<p>
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For an overview of standard Markdown visit the
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<a href="https://commonmark.org/help/tutorial/">commonmark.org tutorial</a>.
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</p>
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<p>
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For an overview of standard Markdown visit the
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<a href="https://commonmark.org/help/tutorial/">commonmark.org tutorial</a>.
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</p>
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<p>
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The Galaxy extensions to Markdown are represented as code blocks, these blocks start with the line
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<tt>```galaxy</tt> and end with the line <tt>```</tt> and have a command with arguments between these
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lines.
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<span v-if="page">
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These arguments reference your Galaxy objects such as datasets, jobs, and workflows.
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</span>
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<span v-else>
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These arguments reference parts of your workflow such as steps, inputs, and outputs by label in the
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middle.
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</span>
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</p>
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<p>
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The Galaxy extensions to Markdown are represented as code blocks, these blocks start with the line
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<tt>```galaxy</tt> and end with the line <tt>```</tt> and have a command with arguments between these lines.
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<span v-if="page">
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These arguments reference your Galaxy objects such as datasets, jobs, and workflows.
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</span>
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<span v-else>
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These arguments reference parts of your workflow such as steps, inputs, and outputs by label in the
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middle.
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</span>
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</p>
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<h3>History Contents Commands</h3>
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<h3>History Contents Commands</h3>
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<p>
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These commands reference a dataset or dataset collection. For instance, the following examples would
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display the dataset collection metadata and would embed a dataset into the document as an image.
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<p>
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These commands reference a dataset or dataset collection. For instance, the following examples would display
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the dataset collection metadata and would embed a dataset into the document as an image.
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<span v-if="page">
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These elements are referenced by object IDs used by the Galaxy API. The Markdown editor will let you
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pick objects graphically but they will be embedded into the Markdown with these IDs.
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</span>
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<span v-if="page">
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These elements are referenced by object IDs used by the Galaxy API. The Markdown editor will let you
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pick objects graphically but they will be embedded into the Markdown with these IDs.
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</span>
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<span v-else>
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These elements are referenced by input or output labels for the workflow. If a dataset or collection
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you'd like to reference is not available for selection in the Markdown editor, be sure to assign a
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label to the object in the workflow editor first.
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</span>
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</p>
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<span v-else>
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These elements are referenced by input or output labels for the workflow. If a dataset or collection
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you'd like to reference is not available for selection in the Markdown editor, be sure to assign a label
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to the object in the workflow editor first.
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</span>
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</p>
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<pre v-if="page">
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<pre v-if="page">
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```galaxy
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history_dataset_collection_display(history_dataset_collection_id=33b43b4e7093c91f)
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```
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</pre
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>
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<pre v-else>
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>
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<pre v-else>
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```galaxy
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history_dataset_collection_display(output=mapped_bams)
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```
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</pre
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>
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>
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<pre v-if="page">
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<pre v-if="page">
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```galaxy
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history_dataset_as_image(history_dataset_id=33b43b4e7093c91f)
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```
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</pre
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>
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<pre v-else>
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>
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<pre v-else>
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```galaxy
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history_dataset_as_image(output=normalized_result_plot)
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```
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</pre
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>
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>
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<DirectiveHelpSection
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:mode="mode"
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:directives="[
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'history_dataset_display',
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'history_dataset_collection_display',
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'history_dataset_as_image',
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'history_dataset_as_table',
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'history_dataset_peek',
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'history_dataset_info',
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]" />
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<DirectiveHelpSection
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:mode="mode"
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:directives="[
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'history_dataset_display',
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'history_dataset_collection_display',
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'history_dataset_as_image',
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'history_dataset_as_table',
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'history_dataset_peek',
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'history_dataset_info',
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]" />
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<h3>Workflow Commands</h3>
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<h3>Workflow Commands</h3>
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<p v-if="page">
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These commands reference a workflow by an object ID. The following example would display a
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representation of the workflow in the resulting Galaxy Page:
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</p>
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<p v-else>These commands reference the current workflow and do not require an input for the most part.</p>
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<p v-if="page">
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These commands reference a workflow by an object ID. The following example would display a representation of
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the workflow in the resulting Galaxy Page:
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</p>
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<p v-else>These commands reference the current workflow and do not require an input for the most part.</p>
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<pre v-if="page">
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<pre v-if="page">
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```galaxy
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workflow_display(workflow_id=33b43b4e7093c91f>)
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```
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</pre
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>
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<pre v-else>
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>
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<pre v-else>
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```galaxy
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workflow_display()
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```
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</pre>
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</pre
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>
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<DirectiveHelpSection
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:mode="mode"
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:directives="['workflow_license', 'workflow_display', 'workflow_image', 'invocation_time']" />
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<DirectiveHelpSection
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:mode="mode"
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:directives="['workflow_license', 'workflow_display', 'workflow_image', 'invocation_time']" />
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<h3>Job Commands</h3>
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<h3>Job Commands</h3>
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<p v-if="page">
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These commands reference a Galaxy job. For instance, the following example would show the job parameters
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the job ID <tt>33b43b4e7093c91f</tt>.
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</p>
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<p v-else>
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These commands reference a Galaxy job or collection of jobs associated with a labeled step in the
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workflow. For instance, the following example would show the job parameters for the step with the label
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<tt>mapping</tt>.
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</p>
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<p v-if="page">
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These commands reference a Galaxy job. For instance, the following example would show the job parameters the
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job ID <tt>33b43b4e7093c91f</tt>.
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</p>
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<p v-else>
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These commands reference a Galaxy job or collection of jobs associated with a labeled step in the workflow.
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For instance, the following example would show the job parameters for the step with the label
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<tt>mapping</tt>.
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</p>
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<pre v-if="page">
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<pre v-if="page">
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```galaxy
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job_parameters(job_id=33b43b4e7093c91f)
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```
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</pre
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>
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<pre v-else>
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>
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<pre v-else>
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```galaxy
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job_parameters(step=mapping)
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```
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</pre>
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</pre
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>
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<DirectiveHelpSection
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:mode="mode"
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:directives="['tool_stderr', 'tool_stdout', 'job_metrics', 'job_parameters']" />
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</div>
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</b-modal>
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<DirectiveHelpSection
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:mode="mode"
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:directives="['tool_stderr', 'tool_stdout', 'job_metrics', 'job_parameters']" />
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</div>
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</template>
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@@ -0,0 +1,37 @@
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<script setup lang="ts">
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import { computed, ref } from "vue";
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import MarkdownHelp from "./MarkdownHelp.vue";
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interface MarkdownHelpModalProps {
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mode: "report" | "page";
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}
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const props = defineProps<MarkdownHelpModalProps>();
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const show = ref(false);
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const title = computed(() => {
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if (props.mode == "page") {
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return "Markdown Help for Pages";
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} else {
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return "Markdown Help for Invocation Reports";
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}
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});
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function showMarkdownHelp() {
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show.value = true;
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}
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defineExpose({
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showMarkdownHelp,
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});
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</script>
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<template>
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||||
<b-modal v-model="show" hide-footer>
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||||
<template v-slot:modal-title>
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<h2 class="mb-0">{{ title }}</h2>
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</template>
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<MarkdownHelp :mode="mode" />
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</b-modal>
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</template>
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