opensource/galaxy
3
0
Fork 0
mirror of https://github.com/galaxyproject/galaxy.git synced 2026-09-24 16:30:27 +08:00
Code Issues Packages Projects Releases Wiki Activity

OOps, collision.

Browse Source
This commit is contained in:
Ian Schenck
2007-03-09 19:47:11 +00:00
parent 2ddab5819a
commit 468a0eb711
1 changed files with 0 additions and 20 deletions
Download Patch File Download Diff File Expand all files Collapse all files
lib/galaxy/jobs/__init__.py
-20
View File
@@ -235,31 +235,11 @@ class JobWrapper( object ):
# file must exist in order to validate it
if os.path.exists(out_dataset.dataset.file_name):
errors = out_dataset.dataset.datatype.validate(out_dataset.dataset)
<<<<<<< .mine
for error in errors:
out_dataset.dataset.add_validation_error(
model.ValidationError( message=str( error ), err_type=error.__class__.__name__, attributes=str( error.__dict__ ) ) )
print str( error )
=======
if len(errors) > 0:
# create child dataset with errors
errordata = model.Dataset( hid=out_dataset.dataset.hid,
state=model.Dataset.states.OK,
extension='text',
name='Errors',
info='', blurb='Errors!')
assoc = model.DatasetChildAssociation()
assoc.child = errordata
out_dataset.dataset.children.append( assoc )
errordata.flush()
errorfile = open(errordata.file_name,"w")
for error in errors:
print >> errorfile, str( error )
errorfile.close()
errordata.set_peek()
self.app.model.flush()
>>>>>>> .r1414
mapping.context.current.flush()
log.debug('job ended, id: %d' % self.job_id )